FFCP PHASE1:Hg19::chr11:114310102..114310118,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:114310102..114310118,+
|short_description=p3@REXO2
|description=CAGE_peak_3_at_REXO2_5end
|association_with_transcript=0bp_to_ENST00000265881,NM_015523,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25996 | |EntrezGene=25996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17851 | |HGNC=17851 | ||
|UniProt=Q9Y3B8, | |TSSclassifier=strong | ||
|UniProt=Q9Y3B8,B2R532 | |||
|association_with_transcript=0bp_to_ENST00000265881,NM_015523,uc001poy.2,uc001poz.2_5end | |||
|cluster_id=chr11:114310102..114310118,+ | |||
|coexpression_cluster_id=C3084 | |||
|description=CAGE_peak_3_at_REXO2_5end | |||
|id=chr11:114310102..114310118,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.66e-19!180;CL:0000548!3.03e-18!679;CL:0000004!3.03e-18!679;CL:0000255!3.03e-18!679;CL:0000012!5.00e-18!682;CL:0002321!1.41e-17!248;CL:0000220!2.41e-17!246;CL:0000222!2.83e-15!119;CL:0000066!2.63e-13!254;CL:0000144!1.97e-12!625;CL:0000680!1.11e-10!57;CL:0000056!1.11e-10!57;CL:0000355!1.11e-10!57;CL:0000057!1.23e-10!75;CL:0000187!2.74e-10!54;CL:0000003!2.95e-10!722;CL:0000393!9.14e-10!60;CL:0000211!9.14e-10!60;CL:0000192!1.94e-09!42;CL:0000514!1.94e-09!42;CL:0002371!1.43e-08!591;CL:0000183!1.71e-08!59;CL:0000359!1.80e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.40e-09;32!CL:0000077;3.72e-07;19!CL:0000192;4.07e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.01e-16,121;CL:0002321,3.58e-15,250;CL:0000057,2.73e-11,76;CL:0000393,2.03e-10,61;CL:0000211,2.03e-10,61;CL:0000680,2.95e-10,58;CL:0000056,2.95e-10,58;CL:0000355,2.95e-10,58;CL:0000187,3.87e-10,55;CL:0000066,4.72e-10,253;CL:0000359,1.75e-09,32;CL:0000192,1.88e-09,43;CL:0000514,1.88e-09,43 | |||
|ontology_enrichment_development_v019=CL:0000514;4.07e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!3.92e-13!138;UBERON:0002100!3.05e-12!216;UBERON:0005256!3.15e-12!143;UBERON:0003104!6.11e-12!238;UBERON:0009142!6.11e-12!238;UBERON:0004872!5.99e-11!84;UBERON:0000914!8.20e-11!83;UBERON:0002329!8.20e-11!83;UBERON:0003077!8.20e-11!83;UBERON:0003059!8.20e-11!83;UBERON:0007282!8.20e-11!83;UBERON:0009618!8.20e-11!83;UBERON:0007285!8.20e-11!83;UBERON:0000486!1.05e-10!82;UBERON:0004290!1.62e-10!70;UBERON:0002049!6.12e-10!79;UBERON:0007798!6.12e-10!79;UBERON:0003914!1.65e-09!118;UBERON:0001134!2.22e-09!61;UBERON:0002036!2.22e-09!61;UBERON:0003082!2.22e-09!61;UBERON:0001637!5.29e-09!42;UBERON:0003509!5.29e-09!42;UBERON:0004572!5.29e-09!42;UBERON:0000055!6.65e-09!69;UBERON:0002385!1.60e-08!63;UBERON:0001015!1.60e-08!63;UBERON:0000383!1.60e-08!63;UBERON:0000119!1.71e-08!312;UBERON:0001981!2.69e-08!60;UBERON:0007500!2.69e-08!60;UBERON:0004537!2.69e-08!60;UBERON:0006965!2.69e-08!60;UBERON:0000483!3.68e-08!309;UBERON:0001048!1.71e-07!168;UBERON:0000481!2.16e-07!347;UBERON:0005156!3.35e-07!59;UBERON:0000990!3.35e-07!59;UBERON:0000475!4.68e-07!365;UBERON:0004535!5.78e-07!110;UBERON:0004573!6.39e-07!33;UBERON:0004571!6.39e-07!33;UBERON:0001737!8.28e-07!9;UBERON:0001009!9.20e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.67e-08;9!UBERON:0001557;3.67e-08;9!UBERON:0001637;2.60e-07;42!UBERON:0003509;2.60e-07;42!UBERON:0004572;2.60e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,1.88e-14,148;UBERON:0003914,1.30e-11,117;UBERON:0004872,2.65e-11,83;UBERON:0005256,4.32e-11,122;UBERON:0000486,1.45e-10,83;UBERON:0001637,2.20e-10,42;UBERON:0003509,2.20e-10,42;UBERON:0004572,2.20e-10,42;UBERON:0002329,2.58e-10,71;UBERON:0003059,2.58e-10,71;UBERON:0007282,2.58e-10,71;UBERON:0004290,2.58e-10,71;UBERON:0009618,2.58e-10,71;UBERON:0002100,3.96e-10,199;UBERON:0003077,6.02e-10,72;UBERON:0007285,6.02e-10,72;UBERON:0007503,1.10e-09,78;UBERON:0007524,1.37e-09,73;UBERON:0003104,2.90e-09,160;UBERON:0009142,2.90e-09,160;UBERON:0002049,3.94e-09,78;UBERON:0007798,3.94e-09,78;UBERON:0000055,8.01e-09,68;UBERON:0001134,1.09e-08,62;UBERON:0002036,1.09e-08,62;UBERON:0003082,1.09e-08,62;UBERON:0007500,1.25e-08,59;UBERON:0001981,1.25e-08,59;UBERON:0004537,1.25e-08,59;UBERON:0006965,1.25e-08,59;UBERON:0001737,3.61e-08,9;UBERON:0002385,5.36e-08,64;UBERON:0001015,5.36e-08,64;UBERON:0000383,5.36e-08,64;UBERON:0004535,6.07e-08,109;UBERON:0001009,7.30e-08,112;UBERON:0004573,1.64e-07,33;UBERON:0004571,1.64e-07,33;UBERON:0000119,7.02e-07,309 | |||
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| ||
|short_description=p3@REXO2 | |||
}} | }} |
Latest revision as of 07:28, 25 September 2015
Short description: | p3@REXO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_REXO2_5end |
Coexpression cluster: | C3084_Mallassezderived_Mesothelial_leiomyoma_granulosa_Sertoli_acute_Prostate |
Association with transcript: | 0bp_to_ENST00000265881, NM_015523, uc001poy.2, uc001poz.2_5end |
EntrezGene: | REXO2 |
HGNC: | 17851 |
UniProt: | Q9Y3B8B2R532 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.01e-16 | 121 |
embryonic cell | 3.58e-15 | 250 |
fibroblast | 2.73e-11 | 76 |
electrically responsive cell | 2.03e-10 | 61 |
electrically active cell | 2.03e-10 | 61 |
muscle precursor cell | 2.95e-10 | 58 |
myoblast | 2.95e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.95e-10 | 58 |
muscle cell | 3.87e-10 | 55 |
epithelial cell | 4.72e-10 | 253 |
vascular associated smooth muscle cell | 1.75e-09 | 32 |
smooth muscle cell | 1.88e-09 | 43 |
smooth muscle myoblast | 1.88e-09 | 43 |