FFCP PHASE1:Hg19::chr19:1128234..1128266,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22904 | |EntrezGene=22904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29158 | |HGNC=29158 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2G9 | |UniProt=Q9Y2G9 | ||
|association_with_transcript=-493bp_to_AK074102_5end | |association_with_transcript=-493bp_to_AK074102_5end | ||
|cluster_id=chr19:1128234..1128266,- | |||
|coexpression_cluster_id=C69 | |||
|description=CAGE_peak_14_at_SBNO2_5end | |description=CAGE_peak_14_at_SBNO2_5end | ||
|id=chr19:1128234..1128266,- | |id=chr19:1128234..1128266,- | ||
|ontology_enrichment_celltype=CL:0002009!1.50e-10!65;CL:0001014!5.50e-10!2;CL:0001016!5.50e-10!2;CL:0000557!2.05e-09!71;CL:0002057!2.84e-09!42;CL:0000453!1.20e-08!5;CL:0000860!1.59e-08!45;CL:0000839!3.84e-08!70;CL:0000990!5.15e-08!8;CL:0002194!6.80e-08!63;CL:0000576!6.80e-08!63;CL:0000040!6.80e-08!63;CL:0000559!6.80e-08!63;CL:0000840!4.00e-07!5;CL:0001029!4.00e-07!5;CL:0000763!9.78e-07!112;CL:0000049!9.78e-07!112 | |ontology_enrichment_celltype=CL:0002009!1.50e-10!65;CL:0001014!5.50e-10!2;CL:0001016!5.50e-10!2;CL:0000557!2.05e-09!71;CL:0002057!2.84e-09!42;CL:0000453!1.20e-08!5;CL:0000860!1.59e-08!45;CL:0000839!3.84e-08!70;CL:0000990!5.15e-08!8;CL:0002194!6.80e-08!63;CL:0000576!6.80e-08!63;CL:0000040!6.80e-08!63;CL:0000559!6.80e-08!63;CL:0000840!4.00e-07!5;CL:0001029!4.00e-07!5;CL:0000763!9.78e-07!112;CL:0000049!9.78e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.63e-43;33!CL:0002057;3.63e-43;33!CL:0000473;2.26e-31;39!CL:0000234;2.26e-31;39!CL:0000576;1.49e-24;48!CL:0000766;1.69e-10;69!CL:0000763;3.20e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.40e-37,42;CL:0002057,1.40e-37,42;CL:0000473,7.36e-33,48;CL:0000234,7.36e-33,48;CL:0002194,3.04e-26,59;CL:0000576,3.04e-26,59;CL:0000040,3.04e-26,59;CL:0000559,3.04e-26,59;CL:0002009,2.18e-25,61;CL:0000839,1.79e-23,66;CL:0000557,4.00e-23,67;CL:0000766,1.60e-21,72;CL:0002087,1.17e-16,115;CL:0002031,5.91e-16,120;CL:0000763,2.69e-14,108;CL:0000049,2.69e-14,108;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.25e-29;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.88e-30!9;UBERON:0001557!3.43e-17!19;UBERON:0008947!1.05e-09!38;UBERON:0003258!1.05e-09!38;UBERON:0000072!2.69e-09!46;UBERON:0002371!4.91e-08!80;UBERON:0000065!8.59e-08!53;UBERON:0001474!2.81e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.18e-20,76;UBERON:0001474,6.86e-19,82;UBERON:0004765,3.36e-17,90;UBERON:0002405,1.22e-16,93;UBERON:0002390,8.84e-16,98;UBERON:0003061,8.84e-16,98;UBERON:0001434,1.85e-15,100;UBERON:0002193,2.69e-14,108;UBERON:0002204,4.12e-09,167;UBERON:0003081,2.10e-07,203 | |||
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| ||
|short_description=p14@SBNO2 | |short_description=p14@SBNO2 | ||
}} | }} |
Latest revision as of 04:30, 25 September 2015
Short description: | p14@SBNO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SBNO2_5end |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | -493bp_to_AK074102_5end |
EntrezGene: | SBNO2 |
HGNC: | 29158 |
UniProt: | Q9Y2G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.40e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.40e-37 | 42 |
defensive cell | 7.36e-33 | 48 |
phagocyte | 7.36e-33 | 48 |
monopoietic cell | 3.04e-26 | 59 |
monocyte | 3.04e-26 | 59 |
monoblast | 3.04e-26 | 59 |
promonocyte | 3.04e-26 | 59 |
macrophage dendritic cell progenitor | 2.18e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.79e-23 | 66 |
granulocyte monocyte progenitor cell | 4.00e-23 | 67 |
myeloid leukocyte | 1.60e-21 | 72 |
nongranular leukocyte | 1.17e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.91e-16 | 120 |
myeloid cell | 2.69e-14 | 108 |
common myeloid progenitor | 2.69e-14 | 108 |
leukocyte | 4.83e-14 | 136 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.18e-20 | 76 |
bone element | 6.86e-19 | 82 |
skeletal element | 3.36e-17 | 90 |
immune system | 1.22e-16 | 93 |
hematopoietic system | 8.84e-16 | 98 |
blood island | 8.84e-16 | 98 |
skeletal system | 1.85e-15 | 100 |
hemolymphoid system | 2.69e-14 | 108 |
musculoskeletal system | 4.12e-09 | 167 |
lateral plate mesoderm | 2.10e-07 | 203 |