FFCP PHASE1:Hg19::chr19:1859361..1859375,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:1859361..1859375,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_at_chr19:1859361..1859375,- | |description=CAGE_peak_at_chr19:1859361..1859375,- | ||
|id=chr19:1859361..1859375,- | |id=chr19:1859361..1859375,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.42e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.57e-28!41;UBERON:0001890!1.57e-28!41;UBERON:0006240!1.57e-28!41;UBERON:0003080!8.93e-28!42;UBERON:0003056!3.61e-23!61;UBERON:0000369!2.77e-20!4;UBERON:0002435!2.77e-20!4;UBERON:0000204!2.77e-20!4;UBERON:0010082!2.77e-20!4;UBERON:0001049!1.40e-19!57;UBERON:0005068!1.40e-19!57;UBERON:0006241!1.40e-19!57;UBERON:0007135!1.40e-19!57;UBERON:0000955!1.44e-19!69;UBERON:0006238!1.44e-19!69;UBERON:0002616!8.50e-19!59;UBERON:0001869!8.58e-18!32;UBERON:0001894!2.06e-17!7;UBERON:0006222!2.06e-17!7;UBERON:0005743!7.18e-17!86;UBERON:0001893!1.23e-16!34;UBERON:0001017!7.29e-16!82;UBERON:0005383!8.76e-16!3;UBERON:0005382!8.76e-16!3;UBERON:0003075!3.00e-15!86;UBERON:0007284!3.00e-15!86;UBERON:0000073!7.04e-15!94;UBERON:0001016!7.04e-15!94;UBERON:0007023!1.25e-14!115;UBERON:0002791!1.87e-14!33;UBERON:0002346!2.18e-14!90;UBERON:0002020!5.58e-14!34;UBERON:0003528!5.58e-14!34;UBERON:0000033!3.80e-13!123;UBERON:0000153!2.57e-12!129;UBERON:0007811!2.57e-12!129;UBERON:0000200!4.66e-12!6;UBERON:0009663!1.24e-11!7;UBERON:0003296!1.45e-11!4;UBERON:0010133!1.45e-11!4;UBERON:0001873!5.13e-11!2;UBERON:0010122!5.13e-11!2;UBERON:0001905!5.39e-11!2;UBERON:0002757!5.39e-11!2;UBERON:0010134!5.39e-11!2;UBERON:0002784!5.39e-11!2;UBERON:0005408!5.39e-11!2;UBERON:0001899!5.39e-11!2;UBERON:0001950!1.17e-09!20;UBERON:0001871!1.75e-09!7;UBERON:0002308!4.68e-09!9;UBERON:0002420!4.68e-09!9;UBERON:0000125!4.68e-09!9;UBERON:0007245!4.68e-09!9;UBERON:0010009!4.68e-09!9;UBERON:0010011!4.68e-09!9;UBERON:0000454!4.68e-09!9;UBERON:0002619!9.65e-09!22;UBERON:0000956!1.24e-07!25;UBERON:0000203!1.24e-07!25;UBERON:0004121!2.56e-07!169;UBERON:0000924!4.73e-07!173;UBERON:0006601!4.73e-07!173;UBERON:0002771!6.09e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;1.33e-29;1!UBERON:0001905;2.21e-15;2!UBERON:0002757;2.21e-15;2!UBERON:0010134;2.21e-15;2!UBERON:0005408;2.21e-15;2!UBERON:0001899;2.21e-15;2!UBERON:0000059;3.13e-11;11!UBERON:0005383;8.17e-11;3!UBERON:0005382;8.17e-11;3!UBERON:0000369;1.96e-08;4!UBERON:0002435;1.96e-08;4!UBERON:0000204;1.96e-08;4!UBERON:0001052;2.35e-08;4!UBERON:0003296;2.35e-08;4!UBERON:0010133;2.35e-08;4!UBERON:0002784;2.35e-08;4!UBERON:0000160;3.14e-07;17!UBERON:0000966;5.08e-07;5!UBERON:0005388;5.08e-07;5!UBERON:0001802;5.08e-07;5!UBERON:0004907;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,1.33e-29,1;UBERON:0001905,2.74e-15,2;UBERON:0002757,2.74e-15,2;UBERON:0010134,2.74e-15,2;UBERON:0005408,2.74e-15,2;UBERON:0001899,2.74e-15,2;UBERON:0000059,2.83e-11,11;UBERON:0005383,8.17e-11,3;UBERON:0005382,8.17e-11,3;UBERON:0000369,1.96e-08,4;UBERON:0002435,1.96e-08,4;UBERON:0000204,1.96e-08,4;UBERON:0010082,1.96e-08,4;UBERON:0001052,2.11e-08,4;UBERON:0003296,2.61e-08,4;UBERON:0010133,2.61e-08,4;UBERON:0002784,2.61e-08,4;UBERON:0003056,8.93e-08,61;UBERON:0000160,2.95e-07,17;UBERON:0004907,5.70e-07,5 | |||
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|short_description=p@chr19:1859361..1859375,- | |short_description=p@chr19:1859361..1859375,- | ||
}} | }} |
Latest revision as of 05:12, 26 July 2015
Short description: | p@chr19:1859361..1859375, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1859361..1859375, - |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
putamen | 1.33e-29 | 1 |
pineal body | 2.74e-15 | 2 |
regional part of epithalamus | 2.74e-15 | 2 |
secretory circumventricular organ | 2.74e-15 | 2 |
circumventricular organ | 2.74e-15 | 2 |
epithalamus | 2.74e-15 | 2 |
large intestine | 2.83e-11 | 11 |
caudate-putamen | 8.17e-11 | 3 |
dorsal striatum | 8.17e-11 | 3 |
corpus striatum | 1.96e-08 | 4 |
striatum | 1.96e-08 | 4 |
ventral part of telencephalon | 1.96e-08 | 4 |
future corpus striatum | 1.96e-08 | 4 |
rectum | 2.11e-08 | 4 |
gland of diencephalon | 2.61e-08 | 4 |
neuroendocrine gland | 2.61e-08 | 4 |
regional part of diencephalon | 2.61e-08 | 4 |
pre-chordal neural plate | 8.93e-08 | 61 |
intestine | 2.95e-07 | 17 |
lower digestive tract | 5.70e-07 | 5 |