FFCP PHASE1:Hg19::chr19:19784077..19784078,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:19784077..19784078,+ | |||
|description=CAGE_peak_at_chr19:19784077..19784078,+ | |description=CAGE_peak_at_chr19:19784077..19784078,+ | ||
|id=chr19:19784077..19784078,+ | |id=chr19:19784077..19784078,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.47e-17!52;CL:0000542!8.04e-17!53;CL:0000051!8.04e-17!53;CL:0002087!2.95e-10!119;CL:0000084!5.95e-10!25;CL:0000827!5.95e-10!25;CL:0000738!2.59e-09!140;CL:0000988!3.25e-09!182;CL:0000037!6.54e-09!172;CL:0000566!6.54e-09!172;CL:0002031!9.08e-09!124;CL:0002032!1.16e-07!165;CL:0000837!1.16e-07!165;CL:0000945!1.73e-07!24;CL:0000826!1.73e-07!24;CL:0000791!4.94e-07!18;CL:0000789!4.94e-07!18;CL:0002420!4.94e-07!18;CL:0002419!4.94e-07!18;CL:0000790!4.94e-07!18;CL:0000624!9.16e-07!6 | |ontology_enrichment_celltype=CL:0000838!2.47e-17!52;CL:0000542!8.04e-17!53;CL:0000051!8.04e-17!53;CL:0002087!2.95e-10!119;CL:0000084!5.95e-10!25;CL:0000827!5.95e-10!25;CL:0000738!2.59e-09!140;CL:0000988!3.25e-09!182;CL:0000037!6.54e-09!172;CL:0000566!6.54e-09!172;CL:0002031!9.08e-09!124;CL:0002032!1.16e-07!165;CL:0000837!1.16e-07!165;CL:0000945!1.73e-07!24;CL:0000826!1.73e-07!24;CL:0000791!4.94e-07!18;CL:0000789!4.94e-07!18;CL:0002420!4.94e-07!18;CL:0002419!4.94e-07!18;CL:0000790!4.94e-07!18;CL:0000624!9.16e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000785;2.71e-19;1!CL:0000819;2.71e-19;1!CL:0000236;4.28e-13;13!CL:0000815;2.48e-10;2!CL:0000792;2.48e-10;2!CL:0002677;2.48e-10;2!CL:0000542;2.19e-09;53!CL:0000945;2.30e-07;24!CL:0000898;2.63e-07;3!CL:0000084;4.31e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.71e-19,1;CL:0000838,2.51e-12,52;CL:0000236,3.07e-12,14;CL:0000542,4.31e-12,53;CL:0000051,4.31e-12,53;CL:0000815,2.07e-10,2;CL:0000792,2.07e-10,2;CL:0002677,2.07e-10,2;CL:0000785,2.49e-10,2;CL:0000955,2.49e-10,2;CL:0000818,2.49e-10,2;CL:0000954,2.49e-10,2;CL:0000816,2.49e-10,2;CL:0000945,2.20e-07,24;CL:0000826,2.20e-07,24;CL:0000898,2.32e-07,3;CL:0000817,2.63e-07,3;CL:0000084,4.41e-07,25;CL:0000827,4.41e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000954;2.48e-10;2!CL:0000051;2.19e-09;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.25e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.71e-19;1!DOID:8675;2.71e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.71e-19,1;DOID:8675,2.71e-19,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.382067028739756,0.328402357799783,0.157421562627358,0,0,0.154816123316076,0,0,0,0.232401601740905,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,1.77901850772711,0.426730222566507,0,0,0,0,0,1.17447437874188,0.382273228125229,0,0,0.263384084775077,0.590129310341499,0.786021525498329,0.205601498999509,0.334372990781356,1.30368906653436,0.946895611469467,1.94826728407911,0.445641827540694,0.589211814949674,0.221533894583621,0.541607727530031,1.0247305578054,2.08094956095805,0,0.276350017785848,0,0.296573126324121,0.535081656179426,1.04535523804977,0.679856056185397,0,0,0,0,0.651083453856419,0,0,0.383959833463255,0,0.710331756132051,0,0,0.267440195783507,1.30341963494519,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0.063497894292169,0.763976851116555,0,0,0,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0.343505344755765,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,1.02193298195737,0.31396051279005,0,0.225595660617181,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,1.27718352450966,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0.144090417154106,0.229073192331831,0.343189995723929,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.315132729228895,0.0824158583811665,0.13480708770837,0,0,0,0,0,0.275078873194468,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0.281951753939561,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0,0,0,0,0,0,0.322944549180031,0.186224142887574,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.382067028739756,0.328402357799783,0.157421562627358,0,0,0.154816123316076,0,0,0,0.232401601740905,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,1.77901850772711,0.426730222566507,0,0,0,0,0,1.17447437874188,0.382273228125229,0,0,0.263384084775077,0.590129310341499,0.786021525498329,0.205601498999509,0.334372990781356,1.30368906653436,0.946895611469467,1.94826728407911,0.445641827540694,0.589211814949674,0.221533894583621,0.541607727530031,1.0247305578054,2.08094956095805,0,0.276350017785848,0,0.296573126324121,0.535081656179426,1.04535523804977,0.679856056185397,0,0,0,0,0.651083453856419,0,0,0.383959833463255,0,0.710331756132051,0,0,0.267440195783507,1.30341963494519,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0.063497894292169,0.763976851116555,0,0,0,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0.343505344755765,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,1.02193298195737,0.31396051279005,0,0.225595660617181,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,1.27718352450966,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0.144090417154106,0.229073192331831,0.343189995723929,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.315132729228895,0.0824158583811665,0.13480708770837,0,0,0,0,0,0.275078873194468,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0.281951753939561,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0,0,0,0,0,0,0.322944549180031,0.186224142887574,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr19:19784077..19784078,+ | |short_description=p@chr19:19784077..19784078,+ | ||
}} | }} |
Latest revision as of 05:33, 26 July 2015
Short description: | p@chr19:19784077..19784078, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:19784077..19784078, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.71e-19 | 1 |
lymphoid lineage restricted progenitor cell | 2.51e-12 | 52 |
B cell | 3.07e-12 | 14 |
lymphocyte | 4.31e-12 | 53 |
common lymphoid progenitor | 4.31e-12 | 53 |
regulatory T cell | 2.07e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.07e-10 | 2 |
naive regulatory T cell | 2.07e-10 | 2 |
mature B cell | 2.49e-10 | 2 |
pre-B-II cell | 2.49e-10 | 2 |
transitional stage B cell | 2.49e-10 | 2 |
small pre-B-II cell | 2.49e-10 | 2 |
immature B cell | 2.49e-10 | 2 |
lymphocyte of B lineage | 2.20e-07 | 24 |
pro-B cell | 2.20e-07 | 24 |
naive T cell | 2.32e-07 | 3 |
precursor B cell | 2.63e-07 | 3 |
T cell | 4.41e-07 | 25 |
pro-T cell | 4.41e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.71e-19 | 1 |
lymphosarcoma | 2.71e-19 | 1 |