FFCP PHASE1:Hg19::chr14:104028710..104028740,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:104028710..104028740,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr14:104028710..104028740,+ | |description=CAGE_peak_at_chr14:104028710..104028740,+ | ||
|id=chr14:104028710..104028740,+ | |id=chr14:104028710..104028740,+ | ||
|ontology_enrichment_celltype=CL:0000222!5.47e-07!119 | |ontology_enrichment_celltype=CL:0000222!5.47e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.12e-17;1!CL:0002625;1.12e-17;1!CL:0000216;1.12e-17;1!CL:0002262;1.17e-09;2!CL:1000398;1.17e-09;2!CL:0002593;1.64e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,8.72e-18,1;CL:0002625,8.72e-18,1;CL:0000216,8.72e-18,1;CL:0002262,1.12e-09,2;CL:1000398,1.12e-09,2;CL:0002593,1.71e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.02e-07;10!UBERON:0005564;1.02e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;9.37e-07;3!DOID:127;9.37e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.15e-07,3;DOID:127,8.15e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000055!3.31e-12!69;UBERON:0001981!3.31e-11!60;UBERON:0007500!3.31e-11!60;UBERON:0004537!3.31e-11!60;UBERON:0006965!3.31e-11!60;UBERON:0002049!4.54e-11!79;UBERON:0007798!4.54e-11!79;UBERON:0001637!7.55e-11!42;UBERON:0003509!7.55e-11!42;UBERON:0004572!7.55e-11!42;UBERON:0004872!9.26e-11!84;UBERON:0004535!7.95e-09!110;UBERON:0004573!1.09e-08!33;UBERON:0004571!1.09e-08!33;UBERON:0001009!2.63e-08!113;UBERON:0003914!4.29e-08!118;UBERON:0004111!6.73e-08!241;UBERON:0000947!1.40e-07!21;UBERON:0010191!1.40e-07!21;UBERON:0000477!4.25e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.94e-19;8!UBERON:0001136;1.12e-17;1!UBERON:0001343;1.12e-17;1!UBERON:0004910;1.12e-17;1!UBERON:0004813;1.12e-17;1!UBERON:0003135;2.52e-14;11!UBERON:0003513;2.13e-10;7!UBERON:0001281;1.17e-09;2!UBERON:0003497;1.17e-09;2!UBERON:0003909;1.17e-09;2!UBERON:0003835;1.17e-09;2!UBERON:0004909;1.64e-09;2!UBERON:0002456;1.64e-09;2!UBERON:0000991;8.77e-08;21!UBERON:0003101;1.87e-07;22!UBERON:0000079;1.87e-07;22!UBERON:0001280;7.49e-07;3!UBERON:0004647;7.49e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.76e-19,8;UBERON:0001136,8.72e-18,1;UBERON:0001343,8.72e-18,1;UBERON:0004910,8.72e-18,1;UBERON:0005154,8.72e-18,1;UBERON:0005295,8.72e-18,1;UBERON:0004813,8.72e-18,1;UBERON:0005297,8.72e-18,1;UBERON:0005294,8.72e-18,1;UBERON:0010141,8.72e-18,1;UBERON:0005891,8.72e-18,1;UBERON:0003135,2.35e-14,11;UBERON:0003513,2.14e-10,7;UBERON:0001281,1.12e-09,2;UBERON:0003497,1.12e-09,2;UBERON:0003909,1.12e-09,2;UBERON:0003835,1.12e-09,2;UBERON:0004909,1.44e-09,2;UBERON:0002456,1.71e-09,2;UBERON:0000058,1.70e-08,19;UBERON:0000991,8.47e-08,21;UBERON:0009196,8.47e-08,21;UBERON:0009117,8.47e-08,21;UBERON:0005564,8.47e-08,21;UBERON:0004176,1.81e-07,22;UBERON:0003101,1.81e-07,22;UBERON:0000079,1.81e-07,22;UBERON:0004876,5.64e-07,11;UBERON:0004872,6.67e-07,83;UBERON:0001280,7.28e-07,3;UBERON:0004647,7.28e-07,3;UBERON:0005171,7.28e-07,3 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0,9.43049343583531,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0.81014194788176,0.357198913136319,0.44905874525234,0,0,0,0.549605231791222,0,0,0,0,0,0.132409180813219,0,1.06400514659507,1.12135520028461,0,0,0.622422070799533,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0.515281080091258,0,0,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0.738155454624648,2.80483547606892,0.4115740113314,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.535286966391485,0,0,0,2.27407504055985,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0,0,0.116210378459959,0,0.40101294060657,0.184161977871793,0.114814448164607,0.364182336013434,0,0,0.0770153371044148,0,0,0,0,0,0,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0.574265537996172,0,1.6068392984416,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.30347334256665,0.464845549297286,0.31481234683064,1.3940745403212,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,1.21856744815642,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0.294747123039363,0,0.354761064070598,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0,0.19351266257817,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,1.62899880526114,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0.899606224327209,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0.414432328326074,0,0,0,0,0.170426809518315,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,26.2952082817291,23.3128793235875,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0,9.43049343583531,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0.81014194788176,0.357198913136319,0.44905874525234,0,0,0,0.549605231791222,0,0,0,0,0,0.132409180813219,0,1.06400514659507,1.12135520028461,0,0,0.622422070799533,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0.515281080091258,0,0,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0.738155454624648,2.80483547606892,0.4115740113314,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.535286966391485,0,0,0,2.27407504055985,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0,0,0.116210378459959,0,0.40101294060657,0.184161977871793,0.114814448164607,0.364182336013434,0,0,0.0770153371044148,0,0,0,0,0,0,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0.574265537996172,0,1.6068392984416,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.30347334256665,0.464845549297286,0.31481234683064,1.3940745403212,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,1.21856744815642,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0.294747123039363,0,0.354761064070598,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0,0.19351266257817,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,1.62899880526114,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0.899606224327209,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0.414432328326074,0,0,0,0,0.170426809518315,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,26.2952082817291,23.3128793235875,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr14:104028710..104028740,+ | |short_description=p@chr14:104028710..104028740,+ | ||
}} | }} |
Latest revision as of 18:21, 24 July 2015
Short description: | p@chr14:104028710..104028740, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:104028710..104028740, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 8.72e-18 | 1 |
seminiferous tubule epithelial cell | 8.72e-18 | 1 |
Sertoli cell | 8.72e-18 | 1 |
endothelial cell of sinusoid | 1.12e-09 | 2 |
endothelial cell of hepatic sinusoid | 1.12e-09 | 2 |
smooth muscle cell of the internal thoracic artery | 1.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.76e-19 | 8 |
mesothelium | 8.72e-18 | 1 |
seminiferous tubule of testis | 8.72e-18 | 1 |
epithelium of male gonad | 8.72e-18 | 1 |
epithelial cord | 8.72e-18 | 1 |
sex cord | 8.72e-18 | 1 |
seminiferous tubule epithelium | 8.72e-18 | 1 |
testis sex cord | 8.72e-18 | 1 |
genital ridge | 8.72e-18 | 1 |
primitive sex cord of indifferent gonad | 8.72e-18 | 1 |
coelomic epithelium | 8.72e-18 | 1 |
male reproductive organ | 2.35e-14 | 11 |
trunk blood vessel | 2.14e-10 | 7 |
hepatic sinusoid | 1.12e-09 | 2 |
abdomen blood vessel | 1.12e-09 | 2 |
sinusoid | 1.12e-09 | 2 |
abdominal segment blood vessel | 1.12e-09 | 2 |
epithelium of gonad | 1.44e-09 | 2 |
internal thoracic artery | 1.71e-09 | 2 |
duct | 1.70e-08 | 19 |
gonad | 8.47e-08 | 21 |
indifferent external genitalia | 8.47e-08 | 21 |
indifferent gonad | 8.47e-08 | 21 |
gonad primordium | 8.47e-08 | 21 |
external genitalia | 1.81e-07 | 22 |
male organism | 1.81e-07 | 22 |
male reproductive system | 1.81e-07 | 22 |
urogenital ridge | 5.64e-07 | 11 |
splanchnic layer of lateral plate mesoderm | 6.67e-07 | 83 |
liver parenchyma | 7.28e-07 | 3 |
liver lobule | 7.28e-07 | 3 |
hepatic duct | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.15e-07 | 3 |
leiomyoma | 8.15e-07 | 3 |