FFCP PHASE1:Hg19::chr11:2935995..2936000,+: Difference between revisions
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|id=chr11:2935995..2936000,+
|short_description=p@chr11:2935995..2936000,+
|description=CAGE_peak_at_chr11:2935995..2936000,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:2935995..2936000,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr11:2935995..2936000,+ | |||
|id=chr11:2935995..2936000,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.05e-34;1!UBERON:0004140;3.05e-34;1!UBERON:0010226;7.05e-34;1!UBERON:0005062;1.57e-09;4!UBERON:0007284;1.57e-09;4 | |||
|ontology_enrichment_disease=DOID:114!1.08e-29!2;DOID:178!1.54e-15!1;DOID:326!1.54e-15!1;DOID:3978!1.54e-15!1;DOID:3394!1.54e-15!1;DOID:5844!1.54e-15!1;DOID:1287!2.22e-15!4 | |||
|ontology_enrichment_disease_v019=DOID:114;5.48e-18;2!DOID:1287;1.12e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.48e-18,2;DOID:1287,1.12e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!2.65e-33!27;UBERON:0004151!2.74e-20!3;UBERON:0003978!4.88e-20!3;UBERON:0009751!4.88e-20!3;UBERON:0000946!4.88e-20!3;UBERON:0002523!4.88e-20!3;UBERON:0005983!4.88e-20!3;UBERON:0002165!4.88e-20!3;UBERON:0002062!4.88e-20!3;UBERON:0007280!4.88e-20!3;UBERON:0002079!6.44e-16!1;UBERON:0002084!8.63e-16!1;UBERON:0002082!8.63e-16!1;UBERON:0004706!8.63e-16!1;UBERON:0002135!9.99e-16!1;UBERON:0002146!1.34e-15!1;UBERON:0005623!1.34e-15!1;UBERON:0007029!1.78e-15!1;UBERON:0003112!2.75e-15!1;UBERON:0000032!2.75e-15!1;UBERON:0005253!2.75e-15!1;UBERON:0003128!2.75e-15!1;UBERON:0002241!2.75e-15!1;UBERON:0001703!2.75e-15!1;UBERON:0004761!2.75e-15!1;UBERON:0009617!2.75e-15!1;UBERON:0000948!5.06e-15!24;UBERON:0005498!5.06e-15!24;UBERON:0004140!5.06e-15!24;UBERON:0009881!5.06e-15!24;UBERON:0004141!5.06e-15!24;UBERON:0003084!5.06e-15!24;UBERON:0007005!5.06e-15!24;UBERON:0004139!5.06e-15!24;UBERON:0004291!5.06e-15!24;UBERON:0003103!1.20e-12!69;UBERON:0007023!2.45e-11!115;UBERON:0002081!1.29e-08!2;UBERON:0002133!1.61e-08!2;UBERON:0000341!2.48e-08!2;UBERON:0001954!2.87e-08!2;UBERON:0003022!2.87e-08!2;UBERON:0002421!2.87e-08!2;UBERON:0002600!2.87e-08!2;UBERON:0001009!1.98e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.50e-47;25!UBERON:0004151;1.36e-44;3!UBERON:0002079;3.05e-34;1!UBERON:0002084;7.05e-34;1!UBERON:0002135;7.05e-34;1!UBERON:0002082;7.05e-34;1!UBERON:0000948;1.82e-24;22!UBERON:0002081;7.05e-18;2!UBERON:0002133;1.07e-17;2!UBERON:0003978;2.89e-12;3!UBERON:0000946;2.89e-12;3!UBERON:0003103;3.67e-10;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,9.77e-45,3;UBERON:0007100,4.38e-44,27;UBERON:0002079,2.58e-34,1;UBERON:0002084,5.05e-34,1;UBERON:0002082,5.05e-34,1;UBERON:0010226,5.05e-34,1;UBERON:0002135,7.06e-34,1;UBERON:0000948,1.63e-22,24;UBERON:0005498,1.63e-22,24;UBERON:0004140,1.63e-22,24;UBERON:0009881,1.63e-22,24;UBERON:0004141,1.63e-22,24;UBERON:0003084,1.63e-22,24;UBERON:0007005,1.63e-22,24;UBERON:0004139,1.63e-22,24;UBERON:0004291,1.63e-22,24;UBERON:0002081,6.48e-18,2;UBERON:0010227,6.48e-18,2;UBERON:0003103,7.10e-18,68;UBERON:0002133,1.07e-17,2;UBERON:0003978,2.89e-12,3;UBERON:0009751,2.89e-12,3;UBERON:0000946,2.89e-12,3;UBERON:0002523,2.89e-12,3;UBERON:0005983,2.89e-12,3;UBERON:0002165,2.89e-12,3;UBERON:0002062,2.89e-12,3;UBERON:0007280,2.89e-12,3;UBERON:0001009,4.95e-11,112;UBERON:0007023,1.12e-07,114;UBERON:0004872,6.53e-07,83 | |||
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|short_description=p@chr11:2935995..2936000,+ | |||
}} | }} |
Latest revision as of 21:23, 23 July 2015
Short description: | p@chr11:2935995..2936000, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2935995..2936000, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 9.77e-45 | 3 |
primary circulatory organ | 4.38e-44 | 27 |
left cardiac atrium | 2.58e-34 | 1 |
heart left ventricle | 5.05e-34 | 1 |
cardiac ventricle | 5.05e-34 | 1 |
future cardiac ventricle | 5.05e-34 | 1 |
mitral valve | 7.06e-34 | 1 |
heart | 1.63e-22 | 24 |
primitive heart tube | 1.63e-22 | 24 |
primary heart field | 1.63e-22 | 24 |
anterior lateral plate mesoderm | 1.63e-22 | 24 |
heart tube | 1.63e-22 | 24 |
heart primordium | 1.63e-22 | 24 |
cardiac mesoderm | 1.63e-22 | 24 |
cardiogenic plate | 1.63e-22 | 24 |
heart rudiment | 1.63e-22 | 24 |
cardiac atrium | 6.48e-18 | 2 |
future cardiac atrium | 6.48e-18 | 2 |
compound organ | 7.10e-18 | 68 |
atrioventricular valve | 1.07e-17 | 2 |
valve | 2.89e-12 | 3 |
cardiac mesenchyme | 2.89e-12 | 3 |
cardial valve | 2.89e-12 | 3 |
tunica intima | 2.89e-12 | 3 |
heart layer | 2.89e-12 | 3 |
endocardium | 2.89e-12 | 3 |
endocardial cushion | 2.89e-12 | 3 |
presumptive endocardium | 2.89e-12 | 3 |
circulatory system | 4.95e-11 | 112 |
adult organism | 1.12e-07 | 114 |
splanchnic layer of lateral plate mesoderm | 6.53e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.48e-18 | 2 |
cardiovascular system disease | 1.12e-09 | 4 |