FFCP PHASE1:Hg19::chr1:212787899..212787903,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=467 | |EntrezGene=467 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=785 | |HGNC=785 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z566 | |UniProt=Q7Z566 | ||
|association_with_transcript=-456bp_to_NM_001206486,uc010ptg.1_5end | |association_with_transcript=-456bp_to_NM_001206486,uc010ptg.1_5end | ||
|cluster_id=chr1:212787899..212787903,+ | |||
|description=CAGE_peak_4_at_ATF3_5end | |description=CAGE_peak_4_at_ATF3_5end | ||
|id=chr1:212787899..212787903,+ | |id=chr1:212787899..212787903,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.80e-26!42;CL:0000860!5.60e-24!45;CL:0000557!1.12e-16!71;CL:0000839!9.86e-16!70;CL:0002009!2.00e-15!65;CL:0002194!7.15e-15!63;CL:0000576!7.15e-15!63;CL:0000040!7.15e-15!63;CL:0000559!7.15e-15!63;CL:0000766!8.99e-15!76;CL:0000738!9.50e-13!140;CL:0002031!3.22e-12!124;CL:0002087!4.19e-12!119;CL:0000763!1.01e-08!112;CL:0000049!1.01e-08!112;CL:0000037!2.70e-08!172;CL:0000566!2.70e-08!172;CL:0002032!3.57e-08!165;CL:0000837!3.57e-08!165;CL:0000988!1.20e-07!182 | |ontology_enrichment_celltype=CL:0002057!1.80e-26!42;CL:0000860!5.60e-24!45;CL:0000557!1.12e-16!71;CL:0000839!9.86e-16!70;CL:0002009!2.00e-15!65;CL:0002194!7.15e-15!63;CL:0000576!7.15e-15!63;CL:0000040!7.15e-15!63;CL:0000559!7.15e-15!63;CL:0000766!8.99e-15!76;CL:0000738!9.50e-13!140;CL:0002031!3.22e-12!124;CL:0002087!4.19e-12!119;CL:0000763!1.01e-08!112;CL:0000049!1.01e-08!112;CL:0000037!2.70e-08!172;CL:0000566!2.70e-08!172;CL:0002032!3.57e-08!165;CL:0000837!3.57e-08!165;CL:0000988!1.20e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.45e-35;33!CL:0002057;4.45e-35;33!CL:0000473;1.69e-27;39!CL:0000234;1.69e-27;39!CL:0000576;5.20e-18;48!CL:0000766;1.76e-11;69!CL:0000763;3.35e-11;100!CL:0001014;6.57e-08;2!CL:0001016;6.57e-08;2!CL:0002087;3.51e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.57e-30,42;CL:0002057,2.57e-30,42;CL:0000557,1.34e-26,67;CL:0000473,2.09e-26,48;CL:0000234,2.09e-26,48;CL:0002009,1.50e-24,61;CL:0000839,1.35e-22,66;CL:0002194,6.35e-21,59;CL:0000576,6.35e-21,59;CL:0000040,6.35e-21,59;CL:0000559,6.35e-21,59;CL:0000766,1.21e-20,72;CL:0000763,4.18e-16,108;CL:0000049,4.18e-16,108;CL:0002031,2.26e-14,120;CL:0000738,1.57e-12,136;CL:0002032,2.25e-10,161;CL:0000837,2.25e-10,161;CL:0002087,2.74e-10,115;CL:0000037,6.95e-10,168;CL:0000988,2.61e-09,177;CL:0001014,5.37e-08,2;CL:0001016,5.37e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.36e-23;42!UBERON:0000358;6.21e-15;1 | |||
|ontology_enrichment_disease=DOID:1749!1.97e-08!14;DOID:305!3.81e-07!106;DOID:0050687!7.80e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.45e-13!80;UBERON:0001474!1.93e-13!86;UBERON:0002390!1.38e-12!102;UBERON:0003061!1.38e-12!102;UBERON:0004765!1.54e-10!101;UBERON:0001434!1.54e-10!101;UBERON:0002193!2.01e-10!112;UBERON:0002405!1.13e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.41e-23,76;UBERON:0001474,1.45e-21,82;UBERON:0004765,1.48e-19,90;UBERON:0002405,6.88e-19,93;UBERON:0002390,7.22e-18,98;UBERON:0003061,7.22e-18,98;UBERON:0001434,1.73e-17,100;UBERON:0002193,4.18e-16,108;UBERON:0002204,5.95e-10,167;UBERON:0003081,1.68e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,0.929716147622738,0.822335776043652,0.929119112685311,1.43846196161075,2.0492856522328,0.47296445977717,0,0,1.35426486594342,1.12945403725563,0.545812300115692,0.224723484445085,5.20342617030534,0.320929027076094,1.27867425159808,0.329851300186716,0.997318288108159,0.852449501065388,1.16083695451434,0.56738522469114,0,2.26123798731069,1.5644487552606,0.65156653411535,1.21079900526674,0.736555271975129,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,1.29707958075265,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.431255149719035,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0.47748896947538,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.153900517007594,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,0,0.296521128680622,0,0,0,0.802577647298789,0.468528891450678,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.391969589657511,0.34823682632161,0.17472666824203,0,0,0,0,0,0.0882561266915003,0,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0.343189995723929,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0,0,1.5476039091159,0,0,0,0.0524545881349981,0,0,1.34340638123612,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0.320362237703084,0,0,0,0.197611631897944,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0.491545817507439,0,0.59996218756479,0,0,0,0.184105950251841,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.294443155503077,0,0.366857197043358,0.462102664601353,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0.671132590786754,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0.11294608203896,0,0.603851374266694,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0.160482733378337,0,0,0.286679166302903,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0.20686599172379,0.213233981900981,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0.407016343054873,1.60091018816573,0,0,2.34640942403454,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,0.929716147622738,0.822335776043652,0.929119112685311,1.43846196161075,2.0492856522328,0.47296445977717,0,0,1.35426486594342,1.12945403725563,0.545812300115692,0.224723484445085,5.20342617030534,0.320929027076094,1.27867425159808,0.329851300186716,0.997318288108159,0.852449501065388,1.16083695451434,0.56738522469114,0,2.26123798731069,1.5644487552606,0.65156653411535,1.21079900526674,0.736555271975129,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,1.29707958075265,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.431255149719035,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0.47748896947538,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.153900517007594,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,0,0.296521128680622,0,0,0,0.802577647298789,0.468528891450678,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.391969589657511,0.34823682632161,0.17472666824203,0,0,0,0,0,0.0882561266915003,0,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0.343189995723929,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0,0,1.5476039091159,0,0,0,0.0524545881349981,0,0,1.34340638123612,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0.320362237703084,0,0,0,0.197611631897944,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0.491545817507439,0,0.59996218756479,0,0,0,0.184105950251841,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.294443155503077,0,0.366857197043358,0.462102664601353,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0.671132590786754,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0.11294608203896,0,0.603851374266694,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0.160482733378337,0,0,0.286679166302903,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0.20686599172379,0.213233981900981,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0.407016343054873,1.60091018816573,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p4@ATF3 | |short_description=p4@ATF3 | ||
}} | }} |
Latest revision as of 00:15, 25 September 2015
Short description: | p4@ATF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATF3_5end |
Coexpression cluster: | NA |
Association with transcript: | -456bp_to_NM_001206486, uc010ptg.1_5end |
EntrezGene: | ATF3 |
HGNC: | 785 |
UniProt: | Q7Z566 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.57e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.57e-30 | 42 |
granulocyte monocyte progenitor cell | 1.34e-26 | 67 |
defensive cell | 2.09e-26 | 48 |
phagocyte | 2.09e-26 | 48 |
macrophage dendritic cell progenitor | 1.50e-24 | 61 |
myeloid lineage restricted progenitor cell | 1.35e-22 | 66 |
monopoietic cell | 6.35e-21 | 59 |
monocyte | 6.35e-21 | 59 |
monoblast | 6.35e-21 | 59 |
promonocyte | 6.35e-21 | 59 |
myeloid leukocyte | 1.21e-20 | 72 |
myeloid cell | 4.18e-16 | 108 |
common myeloid progenitor | 4.18e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 2.26e-14 | 120 |
leukocyte | 1.57e-12 | 136 |
hematopoietic oligopotent progenitor cell | 2.25e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.25e-10 | 161 |
nongranular leukocyte | 2.74e-10 | 115 |
hematopoietic stem cell | 6.95e-10 | 168 |
hematopoietic cell | 2.61e-09 | 177 |
CD1a-positive Langerhans cell | 5.37e-08 | 2 |
immature CD1a-positive Langerhans cell | 5.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.41e-23 | 76 |
bone element | 1.45e-21 | 82 |
skeletal element | 1.48e-19 | 90 |
immune system | 6.88e-19 | 93 |
hematopoietic system | 7.22e-18 | 98 |
blood island | 7.22e-18 | 98 |
skeletal system | 1.73e-17 | 100 |
hemolymphoid system | 4.18e-16 | 108 |
musculoskeletal system | 5.95e-10 | 167 |
lateral plate mesoderm | 1.68e-09 | 203 |