FFCP PHASE1:Hg19::chr16:30197413..30197437,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11151 | |EntrezGene=11151 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2252 | |HGNC=2252 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZW98 | |UniProt=Q6ZW98 | ||
|association_with_transcript=160bp_to_AK123401_5end | |association_with_transcript=160bp_to_AK123401_5end | ||
|cluster_id=chr16:30197413..30197437,+ | |||
|coexpression_cluster_id=C239 | |||
|description=CAGE_peak_2_at_CORO1A_5end | |description=CAGE_peak_2_at_CORO1A_5end | ||
|id=chr16:30197413..30197437,+ | |id=chr16:30197413..30197437,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.17e-53!172;CL:0000566!2.17e-53!172;CL:0000988!4.75e-51!182;CL:0002032!4.75e-50!165;CL:0000837!4.75e-50!165;CL:0000738!7.68e-48!140;CL:0002087!7.47e-45!119;CL:0002031!1.67e-41!124;CL:0000838!7.51e-40!52;CL:0000542!9.18e-39!53;CL:0000051!9.18e-39!53;CL:0000084!1.30e-27!25;CL:0000827!1.30e-27!25;CL:0000791!1.85e-20!18;CL:0000789!1.85e-20!18;CL:0002420!1.85e-20!18;CL:0002419!1.85e-20!18;CL:0000790!1.85e-20!18;CL:0000763!2.15e-16!112;CL:0000049!2.15e-16!112;CL:0000625!4.66e-14!11;CL:0000766!3.37e-12!76;CL:0000945!1.61e-11!24;CL:0000826!1.61e-11!24;CL:0000134!1.17e-10!358;CL:0002194!2.92e-10!63;CL:0000576!2.92e-10!63;CL:0000040!2.92e-10!63;CL:0000559!2.92e-10!63;CL:0002320!6.37e-10!365;CL:0000839!1.15e-09!70;CL:0002009!1.15e-09!65;CL:0000557!2.13e-09!71;CL:0002057!9.47e-08!42;CL:0000219!2.00e-07!390;CL:0000624!4.10e-07!6;CL:0000860!7.80e-07!45 | |ontology_enrichment_celltype=CL:0000037!2.17e-53!172;CL:0000566!2.17e-53!172;CL:0000988!4.75e-51!182;CL:0002032!4.75e-50!165;CL:0000837!4.75e-50!165;CL:0000738!7.68e-48!140;CL:0002087!7.47e-45!119;CL:0002031!1.67e-41!124;CL:0000838!7.51e-40!52;CL:0000542!9.18e-39!53;CL:0000051!9.18e-39!53;CL:0000084!1.30e-27!25;CL:0000827!1.30e-27!25;CL:0000791!1.85e-20!18;CL:0000789!1.85e-20!18;CL:0002420!1.85e-20!18;CL:0002419!1.85e-20!18;CL:0000790!1.85e-20!18;CL:0000763!2.15e-16!112;CL:0000049!2.15e-16!112;CL:0000625!4.66e-14!11;CL:0000766!3.37e-12!76;CL:0000945!1.61e-11!24;CL:0000826!1.61e-11!24;CL:0000134!1.17e-10!358;CL:0002194!2.92e-10!63;CL:0000576!2.92e-10!63;CL:0000040!2.92e-10!63;CL:0000559!2.92e-10!63;CL:0002320!6.37e-10!365;CL:0000839!1.15e-09!70;CL:0002009!1.15e-09!65;CL:0000557!2.13e-09!71;CL:0002057!9.47e-08!42;CL:0000219!2.00e-07!390;CL:0000624!4.10e-07!6;CL:0000860!7.80e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000084;3.51e-40;25!CL:0000791;6.00e-32;18!CL:0000789;6.00e-32;18!CL:0002419;6.00e-32;18!CL:0000625;2.77e-25;11!CL:0000542;1.66e-21;53!CL:0000623;3.98e-09;3!CL:0000898;2.43e-08;3!CL:0002087;2.69e-07;104!CL:0000624;4.62e-07;6!CL:0000738;9.54e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.64e-40,52;CL:0000084,5.76e-40,25;CL:0000827,5.76e-40,25;CL:0000542,1.38e-39,53;CL:0000051,1.38e-39,53;CL:0000791,6.32e-32,18;CL:0000789,6.32e-32,18;CL:0002420,6.32e-32,18;CL:0002419,6.32e-32,18;CL:0000790,6.32e-32,18;CL:0000625,2.71e-25,11;CL:0002087,3.70e-24,115;CL:0000738,3.47e-23,136;CL:0000037,1.77e-21,168;CL:0002031,2.69e-21,120;CL:0002032,3.14e-20,161;CL:0000837,3.14e-20,161;CL:0000988,8.23e-20,177;CL:0000623,3.94e-09,3;CL:0000825,3.94e-09,3;CL:0000898,1.59e-08,3;CL:0000624,3.91e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;6.00e-32;18!CL:0000051;1.66e-21;53 | |||
|ontology_enrichment_disease=DOID:2531!6.22e-16!51;DOID:0060083!6.22e-16!51;DOID:1240!2.35e-11!39;DOID:0060058!7.79e-08!10;DOID:8692!1.19e-07!31 | |ontology_enrichment_disease=DOID:2531!6.22e-16!51;DOID:0060083!6.22e-16!51;DOID:1240!2.35e-11!39;DOID:0060058!7.79e-08!10;DOID:8692!1.19e-07!31 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.29e-19!102;UBERON:0003061!2.29e-19!102;UBERON:0002193!5.28e-18!112;UBERON:0000178!2.97e-11!15;UBERON:0000179!2.97e-11!15;UBERON:0000463!2.97e-11!15;UBERON:0002384!6.17e-09!375;UBERON:0004177!2.73e-08!7;UBERON:0002371!5.10e-08!80;UBERON:0001474!7.67e-08!86;UBERON:0002405!8.26e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.65e-08;15!UBERON:0000179;5.65e-08;15!UBERON:0000463;5.65e-08;15!UBERON:0002370;9.83e-07;2!UBERON:0005058;9.83e-07;2!UBERON:0009113;9.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.42e-11,4;UBERON:0005058,3.42e-11,4;UBERON:0009113,3.42e-11,4;UBERON:0003295,3.42e-11,4;UBERON:0005562,3.42e-11,4;UBERON:0000178,4.34e-08,15;UBERON:0000179,4.34e-08,15;UBERON:0000463,4.34e-08,15;UBERON:0003351,1.82e-07,6 | |||
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|short_description=p2@CORO1A | |short_description=p2@CORO1A | ||
}} | }} |
Latest revision as of 07:06, 16 September 2015
Short description: | p2@CORO1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CORO1A_5end |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | 160bp_to_AK123401_5end |
EntrezGene: | CORO1A |
HGNC: | 2252 |
UniProt: | Q6ZW98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.64e-40 | 52 |
T cell | 5.76e-40 | 25 |
pro-T cell | 5.76e-40 | 25 |
lymphocyte | 1.38e-39 | 53 |
common lymphoid progenitor | 1.38e-39 | 53 |
mature alpha-beta T cell | 6.32e-32 | 18 |
alpha-beta T cell | 6.32e-32 | 18 |
immature T cell | 6.32e-32 | 18 |
mature T cell | 6.32e-32 | 18 |
immature alpha-beta T cell | 6.32e-32 | 18 |
CD8-positive, alpha-beta T cell | 2.71e-25 | 11 |
nongranular leukocyte | 3.70e-24 | 115 |
leukocyte | 3.47e-23 | 136 |
hematopoietic stem cell | 1.77e-21 | 168 |
hematopoietic lineage restricted progenitor cell | 2.69e-21 | 120 |
hematopoietic oligopotent progenitor cell | 3.14e-20 | 161 |
hematopoietic multipotent progenitor cell | 3.14e-20 | 161 |
hematopoietic cell | 8.23e-20 | 177 |
natural killer cell | 3.94e-09 | 3 |
pro-NK cell | 3.94e-09 | 3 |
naive T cell | 1.59e-08 | 3 |
CD4-positive, alpha-beta T cell | 3.91e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.42e-11 | 4 |
hemolymphoid system gland | 3.42e-11 | 4 |
thymic region | 3.42e-11 | 4 |
pharyngeal gland | 3.42e-11 | 4 |
thymus primordium | 3.42e-11 | 4 |
blood | 4.34e-08 | 15 |
haemolymphatic fluid | 4.34e-08 | 15 |
organism substance | 4.34e-08 | 15 |
pharyngeal epithelium | 1.82e-07 | 6 |