FFCP PHASE1:Hg19::chr16:52580953..52580992,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27324 | |EntrezGene=27324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11972 | |HGNC=11972 | ||
|TSSclassifier=strong | |||
|UniProt=O15405,B4DRD0 | |UniProt=O15405,B4DRD0 | ||
|association_with_transcript=-147bp_to_ENST00000219746,NM_001080430,uc002egw.2,uc010vgu.1_5end | |association_with_transcript=-147bp_to_ENST00000219746,NM_001080430,uc002egw.2,uc010vgu.1_5end | ||
|cluster_id=chr16:52580953..52580992,- | |||
|description=CAGE_peak_2_at_TOX3_5end | |description=CAGE_peak_2_at_TOX3_5end | ||
|id=chr16:52580953..52580992,- | |id=chr16:52580953..52580992,- | ||
|ontology_enrichment_celltype=CL:0002319!9.40e-10!25;CL:0000047!9.56e-10!8;CL:0000540!3.20e-07!6;CL:0000031!3.20e-07!6;CL:0000404!3.20e-07!6;CL:0002322!6.07e-07!5;CL:0000133!9.63e-07!59 | |ontology_enrichment_celltype=CL:0002319!9.40e-10!25;CL:0000047!9.56e-10!8;CL:0000540!3.20e-07!6;CL:0000031!3.20e-07!6;CL:0000404!3.20e-07!6;CL:0002322!6.07e-07!5;CL:0000133!9.63e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.60e-14;12!CL:0002605;9.81e-11;3!CL:0000047;5.77e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.81e-14,12;CL:0002605,9.18e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.60e-12;11!UBERON:0009497;8.01e-10;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.69e-23!82;UBERON:0005743!2.31e-22!86;UBERON:0000073!7.00e-22!94;UBERON:0001016!7.00e-22!94;UBERON:0007023!2.78e-19!115;UBERON:0001049!6.12e-18!57;UBERON:0005068!6.12e-18!57;UBERON:0006241!6.12e-18!57;UBERON:0007135!6.12e-18!57;UBERON:0002780!1.66e-16!41;UBERON:0001890!1.66e-16!41;UBERON:0006240!1.66e-16!41;UBERON:0003080!6.43e-16!42;UBERON:0000955!1.52e-15!69;UBERON:0006238!1.52e-15!69;UBERON:0002020!2.55e-15!34;UBERON:0003528!2.55e-15!34;UBERON:0001893!2.84e-15!34;UBERON:0002616!1.00e-14!59;UBERON:0000956!1.25e-14!25;UBERON:0000203!1.25e-14!25;UBERON:0002791!1.46e-14!33;UBERON:0001869!6.17e-14!32;UBERON:0002346!1.38e-13!90;UBERON:0003075!5.63e-13!86;UBERON:0007284!5.63e-13!86;UBERON:0003056!7.42e-13!61;UBERON:0000924!1.55e-12!173;UBERON:0006601!1.55e-12!173;UBERON:0004121!6.04e-12!169;UBERON:0001950!1.34e-11!20;UBERON:0002619!1.73e-11!22;UBERON:0000153!1.24e-09!129;UBERON:0007811!1.24e-09!129;UBERON:0004921!1.48e-09!129;UBERON:0004185!1.48e-09!129;UBERON:0000033!2.33e-09!123;UBERON:0000922!4.34e-09!612;UBERON:0000481!6.47e-09!347;UBERON:0000025!9.17e-08!194;UBERON:0000468!1.34e-07!659;UBERON:0000062!1.93e-07!511;UBERON:0000475!4.17e-07!365;UBERON:0005409!5.86e-07!35;UBERON:0002050!8.02e-07!605;UBERON:0005423!8.02e-07!605;UBERON:0005177!8.47e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.27e-13;22!UBERON:0000160;2.25e-11;17!UBERON:0004921;3.69e-11;33!UBERON:0002107;5.43e-11;19!UBERON:0006925;5.43e-11;19!UBERON:0002423;3.52e-10;25!UBERON:0002365;3.69e-09;31!UBERON:0002330;3.69e-09;31!UBERON:0000956;2.39e-07;25!UBERON:0000203;2.39e-07;25!UBERON:0002368;3.03e-07;33!UBERON:0002108;5.14e-07;4!UBERON:0000922;5.74e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,2.41e-12,118;UBERON:0005409,7.20e-12,25;UBERON:0011216,1.94e-11,223;UBERON:0000160,2.09e-11,17;UBERON:0009854,4.52e-11,23;UBERON:0002107,4.64e-11,19;UBERON:0006925,4.64e-11,19;UBERON:0008836,4.64e-11,19;UBERON:0009497,3.02e-10,25;UBERON:0000015,3.02e-10,25;UBERON:0002423,3.02e-10,25;UBERON:0006235,3.02e-10,25;UBERON:0004161,3.02e-10,25;UBERON:0001007,5.91e-10,145;UBERON:0001555,5.91e-10,145;UBERON:0007026,5.91e-10,145;UBERON:0009856,1.34e-09,26;UBERON:0002365,1.56e-09,31;UBERON:0002330,1.56e-09,31;UBERON:0008835,2.31e-09,22;UBERON:0003894,2.31e-09,22;UBERON:0004119,1.82e-08,160;UBERON:0000925,1.82e-08,160;UBERON:0006595,1.82e-08,160;UBERON:0005172,2.15e-08,54;UBERON:0005173,2.15e-08,54;UBERON:0007499,4.49e-08,25;UBERON:0000956,2.11e-07,25;UBERON:0000203,2.11e-07,25;UBERON:0002417,2.80e-07,60;UBERON:0000916,2.80e-07,60;UBERON:0002108,4.73e-07,4;UBERON:0002368,9.70e-07,35 | |||
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| ||
|short_description=p2@TOX3 | |short_description=p2@TOX3 | ||
}} | }} |
Latest revision as of 22:04, 16 September 2015
Short description: | p2@TOX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TOX3_5end |
Coexpression cluster: | NA |
Association with transcript: | -147bp_to_ENST00000219746, NM_001080430, uc002egw.2, uc010vgu.1_5end |
EntrezGene: | TOX3 |
HGNC: | 11972 |
UniProt: | O15405B4DRD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.81e-14 | 12 |
astrocyte of the cerebral cortex | 9.18e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 2.41e-12 | 118 |
gastrointestinal system | 7.20e-12 | 25 |
organ system subdivision | 1.94e-11 | 223 |
intestine | 2.09e-11 | 17 |
digestive tract diverticulum | 4.52e-11 | 23 |
liver | 4.64e-11 | 19 |
digestive gland | 4.64e-11 | 19 |
liver bud | 4.64e-11 | 19 |
epithelium of foregut-midgut junction | 3.02e-10 | 25 |
anatomical boundary | 3.02e-10 | 25 |
hepatobiliary system | 3.02e-10 | 25 |
foregut-midgut junction | 3.02e-10 | 25 |
septum transversum | 3.02e-10 | 25 |
digestive system | 5.91e-10 | 145 |
digestive tract | 5.91e-10 | 145 |
primitive gut | 5.91e-10 | 145 |
sac | 1.34e-09 | 26 |
exocrine gland | 1.56e-09 | 31 |
exocrine system | 1.56e-09 | 31 |
hepatic diverticulum | 2.31e-09 | 22 |
liver primordium | 2.31e-09 | 22 |
endoderm-derived structure | 1.82e-08 | 160 |
endoderm | 1.82e-08 | 160 |
presumptive endoderm | 1.82e-08 | 160 |
abdomen element | 2.15e-08 | 54 |
abdominal segment element | 2.15e-08 | 54 |
epithelial sac | 4.49e-08 | 25 |
cerebral cortex | 2.11e-07 | 25 |
pallium | 2.11e-07 | 25 |
abdominal segment of trunk | 2.80e-07 | 60 |
abdomen | 2.80e-07 | 60 |
small intestine | 4.73e-07 | 4 |
endocrine gland | 9.70e-07 | 35 |