FFCP PHASE1:Hg19::chr16:66638038..66638062,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=123920 | |EntrezGene=123920 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19174 | |HGNC=19174 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MX0 | |UniProt=Q96MX0 | ||
|association_with_transcript=35bp_to_ENST00000360086_5end | |association_with_transcript=35bp_to_ENST00000360086_5end | ||
|cluster_id=chr16:66638038..66638062,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_CMTM3_5end | |description=CAGE_peak_3_at_CMTM3_5end | ||
|id=chr16:66638038..66638062,+ | |id=chr16:66638038..66638062,+ | ||
|ontology_enrichment_celltype=CL:0000084!2.00e-13!25;CL:0000827!2.00e-13!25;CL:0000791!4.76e-12!18;CL:0000789!4.76e-12!18;CL:0002420!4.76e-12!18;CL:0002419!4.76e-12!18;CL:0000790!4.76e-12!18;CL:0000625!7.74e-08!11;CL:0002320!2.28e-07!365;CL:0000134!3.25e-07!358 | |ontology_enrichment_celltype=CL:0000084!2.00e-13!25;CL:0000827!2.00e-13!25;CL:0000791!4.76e-12!18;CL:0000789!4.76e-12!18;CL:0002420!4.76e-12!18;CL:0002419!4.76e-12!18;CL:0000790!4.76e-12!18;CL:0000625!7.74e-08!11;CL:0002320!2.28e-07!365;CL:0000134!3.25e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000084;8.60e-22;25!CL:0000791;2.77e-20;18!CL:0000789;2.77e-20;18!CL:0002419;2.77e-20;18!CL:0000625;5.21e-12;11!CL:0000624;1.10e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.14e-21,25;CL:0000827,1.14e-21,25;CL:0000791,3.22e-20,18;CL:0000789,3.22e-20,18;CL:0002420,3.22e-20,18;CL:0002419,3.22e-20,18;CL:0000790,3.22e-20,18;CL:0000037,7.16e-13,168;CL:0000988,1.65e-12,177;CL:0000625,4.97e-12,11;CL:0002032,1.13e-09,161;CL:0000837,1.13e-09,161;CL:0000838,1.50e-09,52;CL:0000542,3.16e-09,53;CL:0000051,3.16e-09,53;CL:0000624,1.34e-08,6;CL:0000134,2.12e-08,354;CL:0000738,2.32e-08,136;CL:0002320,8.66e-08,361;CL:0002087,1.42e-07,115;CL:0002031,7.64e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;2.77e-20;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.14e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.21e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.93e-08;15!UBERON:0000179;1.93e-08;15!UBERON:0000463;1.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.38e-09,15;UBERON:0000179,7.38e-09,15;UBERON:0000463,7.38e-09,15;UBERON:0002384,2.72e-07,371 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.845726424575827,1.0007329835313,1.34088328328186,1.74467704820074,2.53299878168311,0,1.56711376919903,0.245733936501509,0.697801167972428,0.436882744260345,1.31883489114227,0.247532705920093,0.662794751455832,0,0.602694528023977,1.46062018077475,0.487932798790507,0.738726348460727,0.204000691244253,2.19418305034661,0,0.273748850145768,0.251085279189606,0.534893840235659,0.57470412614962,0.865818594450472,0.786728553697808,0.767658796194425,0.77408061658038,0,0.90361775633475,0,0,0,1.17440175733939,1.10799081706375,1.20326668482085,1.73608696572681,0.895661896959697,2.26725566213286,0.257575567634187,0.290796477559129,0,0.970336244751265,0.232429036905685,0,0,0,0,0.236482229888585,1.03423704220986,0,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0.320929027076094,0,0.329851300186716,0.598390972864896,0.426224750532694,0,0,0.622822248995575,0.251248665256743,1.0429658368404,0.434377689410233,1.21079900526674,0,0,0,0.425208599930087,0.209658645508376,0.673971786878971,1.50176892841506,0.32145117339416,0,0.39783335439818,1.0959849225878,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,1.32171328579026,0.560508562981536,0.526768169550154,4.13090517239049,3.14408610199332,2.46721798799411,12.0374276681288,3.2592226663359,8.04861269749047,11.6896037044747,9.91553066278045,5.00830042707223,4.87374568083967,6.22848886659536,7.30120522436348,9.75445106699087,8.87964684859851,12.712100818149,8.69409257205158,5.78317596332036,6.1534390460634,12.5442628565972,8.3848913596199,4.21542542962113,4.12352934579156,7.33757106856558,2.86708872891687,5.85975108470777,0.950452044448374,5.72185452495537,7.6791966692651,3.74792179657038,3.31488152861624,7.39015197228942,2.21767417547206,4.81392352410313,3.04131248153878,4.87613732627923,0,0.255725123687061,1.44575660953827,1.50401373190767,0.869079113764942,1.5905718941022,1.94653948121054,0.472674085820339,0.665188192387692,0.702678285545008,0.589405839739707,0.364295288292542,0.370784442784429,1.62273696827342,0.522389211897802,0.797747763113191,2.38490624305342,1.71598473234038,2.97166001063652,0,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0,0,0.35576626268671,0.33472061276467,2.01414658554573,0,0.732186172644509,0,2.43042584364528,0.446498641420399,0.898117490504679,0.337834441449967,0,0.949265659568129,0.366403487860815,1.31780417436063,0,0.436094052142534,0.496971951695318,0.25326102332916,0.794455084879313,0.286836620748814,0.709336764396714,0,0,0.98667019366864,0.311211035399766,0.404132016209064,0.326923806226917,0.454072282934794,0,0.468642863667593,0.624320153660641,0,0.149448680551801,0.117434498643765,0.485618833104395,0.421352420106746,0,0.368502951935304,0.206651562351531,1.18800285728205,0,1.82032272387605,0,0.505008341862199,0.250237039743928,0,0,0,0.45071417671979,0.226864366320042,0,0.85422955527427,0,0.900273288253207,0.618315175430633,0.515281080091258,1.11670113798954,0.506328996723799,1.46155507741798,0.504867548488229,1.10459878370759,1.45481451136931,0.710019185033229,0.201504196455281,0.508681776931463,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0.310983165046111,0.252320850875628,0,0,1.28648187638577,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,1.47008711385542,0,0,0,2.20731549707325,0,0,0.439001141634502,0,0.201057944823262,0.555530670951178,0.977424915930974,0,0,0.34779121492523,0.70445216541493,0.577465791044295,0.925971025153221,1.90254152234598,0,0.858486162094873,0.984868024349589,1.63802985597466,0.891786973732369,0,0.16798212819886,0.141775097242386,0.268675568108545,0,0.383382679165211,0,2.64145302039678,0.621984346622316,2.16179930125442,1.64115163454294,0.444485260045183,0.381988425558278,0,0,0.514137463516618,0.901029173531752,0.571652865261156,0.336393253036082,0,0.07333828582095,0.904902010304444,0,0,1.32969058292435,1.04007436911366,0.257207374262142,0,0,0.285955987316295,0.542621605391443,0.823240336780769,0,1.06617584622764,1.58390374586686,0.301439377059586,0,0.399891964728228,1.2162378064119,1.50677127429638,0,0.479249710983165,0,0,0,0.410952645100767,0.179060963239896,5.60425719967636,2.56139988262505,4.52817907204986,2.31017465303547,0.508189248444927,1.30139853857622,0,0,0.637938751653163,0,0,0,0.36807447515742,0.500170521059677,0,0.831883446123229,0.356857977594324,1.41932173530541,0.585707074963566,0.601892199455438,2.27407504055985,0,0,0.184369168541703,0.434418072340414,0.979005787313703,0.686286847621712,1.86091223510599,1.50999940573032,3.09509917629989,0.606255142892519,1.66435439510497,0.604780586659361,0.496215615637554,0.61384789315225,1.40330047216537,0.256278298511402,2.55853624533352,1.12597744800525,1.48418066444991,0.616838775210622,0.710246901252508,0.164254312027618,0.519254429183621,0.348631135379878,0.241718899183244,0.802025881213139,0.0920809889358963,0,0.546273504020151,0.524497659837696,1.35359883872224,0.385076685522074,2.35304930753057,1.46139224653261,0.94996466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| ||
|short_description=p3@CMTM3 | |short_description=p3@CMTM3 | ||
}} | }} |
Latest revision as of 08:45, 17 September 2015
Short description: | p3@CMTM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CMTM3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 35bp_to_ENST00000360086_5end |
EntrezGene: | CMTM3 |
HGNC: | 19174 |
UniProt: | Q96MX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.14e-21 | 25 |
pro-T cell | 1.14e-21 | 25 |
mature alpha-beta T cell | 3.22e-20 | 18 |
alpha-beta T cell | 3.22e-20 | 18 |
immature T cell | 3.22e-20 | 18 |
mature T cell | 3.22e-20 | 18 |
immature alpha-beta T cell | 3.22e-20 | 18 |
hematopoietic stem cell | 7.16e-13 | 168 |
hematopoietic cell | 1.65e-12 | 177 |
CD8-positive, alpha-beta T cell | 4.97e-12 | 11 |
hematopoietic oligopotent progenitor cell | 1.13e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-09 | 161 |
lymphoid lineage restricted progenitor cell | 1.50e-09 | 52 |
lymphocyte | 3.16e-09 | 53 |
common lymphoid progenitor | 3.16e-09 | 53 |
CD4-positive, alpha-beta T cell | 1.34e-08 | 6 |
mesenchymal cell | 2.12e-08 | 354 |
leukocyte | 2.32e-08 | 136 |
connective tissue cell | 8.66e-08 | 361 |
nongranular leukocyte | 1.42e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 7.64e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 7.38e-09 | 15 |
haemolymphatic fluid | 7.38e-09 | 15 |
organism substance | 7.38e-09 | 15 |
connective tissue | 2.72e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.14e-07 | 39 |