FFCP PHASE1:Hg19::chr11:67275623..67275642,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:67275623..67275642,-
|short_description=p1@CDK2AP2
|description=CAGE_peak_1_at_CDK2AP2_5end
|association_with_transcript=0bp_to_ENST00000531178,uc009yry.2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10263 | |EntrezGene=10263 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30833 | |HGNC=30833 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQJ3 | |UniProt=E9PQJ3 | ||
|association_with_transcript=0bp_to_ENST00000531178,uc009yry.2_5end | |||
|cluster_id=chr11:67275623..67275642,- | |||
|description=CAGE_peak_1_at_CDK2AP2_5end | |||
|id=chr11:67275623..67275642,- | |||
|ontology_enrichment_celltype=CL:0000066!4.90e-22!254;CL:1000497!5.83e-10!18;CL:0002518!5.83e-10!18;CL:1000449!7.99e-09!16;CL:0002681!6.99e-07!13;CL:0002584!6.99e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.72e-11;17!CL:0002518;1.72e-11;17!CL:1000449;2.40e-10;15!CL:0002681;2.41e-08;12!CL:0002584;2.41e-08;12!CL:1000507;5.99e-08;10!CL:1000494;5.99e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.49e-22,253;CL:1000497,1.76e-11,17;CL:0002518,1.76e-11,17;CL:1000449,2.47e-10,15;CL:0002681,2.48e-08,12;CL:0002584,2.48e-08,12;CL:1000507,6.06e-08,10;CL:1000494,6.06e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.85e-09!106;DOID:299!4.25e-07!25;DOID:162!5.61e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:299;4.04e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.85e-09,106;DOID:299,4.25e-07,25;DOID:162,5.61e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000058!2.21e-10!26;UBERON:0003914!4.70e-10!118;UBERON:0005172!7.78e-10!55;UBERON:0005173!7.78e-10!55;UBERON:0001008!9.09e-10!45;UBERON:0000080!1.64e-09!18;UBERON:0002120!1.64e-09!18;UBERON:0004875!1.64e-09!18;UBERON:0005721!1.64e-09!18;UBERON:0005754!1.64e-09!18;UBERON:0007297!1.64e-09!18;UBERON:0006554!2.77e-09!44;UBERON:0006555!2.98e-09!17;UBERON:0005103!2.98e-09!17;UBERON:0000083!2.98e-09!17;UBERON:0009201!2.98e-09!17;UBERON:0004819!2.98e-09!17;UBERON:0006553!2.98e-09!17;UBERON:0003074!2.98e-09!17;UBERON:0003060!2.98e-09!17;UBERON:0002113!3.16e-09!27;UBERON:0003918!3.16e-09!27;UBERON:0005095!3.16e-09!27;UBERON:0007687!3.16e-09!27;UBERON:0000489!3.24e-09!32;UBERON:0009569!3.48e-09!113;UBERON:0005177!6.61e-09!107;UBERON:0004211!7.99e-09!16;UBERON:0001285!7.99e-09!16;UBERON:0007684!7.99e-09!16;UBERON:0003220!7.99e-09!16;UBERON:0004208!7.99e-09!16;UBERON:0003887!1.18e-08!21;UBERON:0005911!1.48e-08!82;UBERON:0002417!4.81e-08!61;UBERON:0000916!4.81e-08!61;UBERON:0000466!6.04e-08!126;UBERON:0004876!6.25e-08!20;UBERON:0004119!9.97e-08!169;UBERON:0000925!9.97e-08!169;UBERON:0006595!9.97e-08!169;UBERON:0003103!2.00e-07!69;UBERON:0000477!2.16e-07!286;UBERON:0000353!2.88e-07!17;UBERON:0004111!3.17e-07!241;UBERON:0003064!5.83e-07!37;UBERON:0001048!6.96e-07!168;UBERON:0001225!6.99e-07!13;UBERON:0008987!6.99e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.17e-11;30!UBERON:0001008;3.17e-11;30!UBERON:0006555;2.40e-10;15!UBERON:0004819;2.40e-10;15!UBERON:0001285;2.40e-10;15!UBERON:0007684;2.40e-10;15!UBERON:0002113;1.42e-09;24!UBERON:0011143;1.42e-09;24!UBERON:0000489;1.89e-09;29!UBERON:0000353;1.37e-08;15!UBERON:0001225;2.41e-08;12!UBERON:0008987;2.41e-08;12!UBERON:0004211;5.99e-08;10!UBERON:0009773;5.99e-08;10!UBERON:0001231;5.99e-08;10!UBERON:0004810;5.99e-08;10!UBERON:0001851;2.92e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,1.22e-11,48;UBERON:0006554,3.91e-11,47;UBERON:0006555,9.45e-11,16;UBERON:0004819,9.45e-11,16;UBERON:0005172,1.49e-10,54;UBERON:0005173,1.49e-10,54;UBERON:0003914,1.59e-10,117;UBERON:0005177,1.77e-10,101;UBERON:0004211,2.47e-10,15;UBERON:0009773,2.47e-10,15;UBERON:0001231,2.47e-10,15;UBERON:0001285,2.47e-10,15;UBERON:0007684,2.47e-10,15;UBERON:0004208,2.47e-10,15;UBERON:0002113,2.62e-10,26;UBERON:0003918,2.62e-10,26;UBERON:0011143,2.62e-10,26;UBERON:0005095,2.62e-10,26;UBERON:0007687,2.62e-10,26;UBERON:0000489,3.50e-10,31;UBERON:0009569,1.11e-09,112;UBERON:0002417,1.24e-08,60;UBERON:0000916,1.24e-08,60;UBERON:0000353,1.36e-08,15;UBERON:0005911,1.48e-08,82;UBERON:0004119,2.22e-08,160;UBERON:0000925,2.22e-08,160;UBERON:0006595,2.22e-08,160;UBERON:0001225,2.48e-08,12;UBERON:0008987,2.48e-08,12;UBERON:0003103,6.06e-08,68;UBERON:0004810,6.06e-08,10;UBERON:0000058,2.00e-07,19;UBERON:0001048,2.93e-07,160;UBERON:0001851,3.20e-07,15;UBERON:0004111,3.39e-07,240;UBERON:0001007,8.38e-07,145;UBERON:0001555,8.38e-07,145;UBERON:0007026,8.38e-07,145 | |||
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| ||
|short_description=p1@CDK2AP2 | |||
}} | }} |
Latest revision as of 18:43, 19 September 2015
Short description: | p1@CDK2AP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDK2AP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000531178, uc009yry.2_5end |
EntrezGene: | CDK2AP2 |
HGNC: | 30833 |
UniProt: | E9PQJ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.49e-22 | 253 |
kidney cell | 1.76e-11 | 17 |
kidney epithelial cell | 1.76e-11 | 17 |
epithelial cell of nephron | 2.47e-10 | 15 |
kidney cortical cell | 2.48e-08 | 12 |
renal cortical epithelial cell | 2.48e-08 | 12 |
kidney tubule cell | 6.06e-08 | 10 |
nephron tubule epithelial cell | 6.06e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.85e-09 | 106 |
adenocarcinoma | 4.25e-07 | 25 |
cancer | 5.61e-07 | 235 |