FFCP PHASE1:Hg19::chr11:69468195..69468212,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:69468195..69468212,+
|short_description=p@chr11:69468195..69468212,+
|description=CAGE_peak_at_chr11:69468195..69468212,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:69468195..69468212,+ | |||
|coexpression_cluster_id=C807 | |||
|description=CAGE_peak_at_chr11:69468195..69468212,+ | |||
|id=chr11:69468195..69468212,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.38e-23!246;CL:0002321!2.12e-23!248;CL:0000055!8.63e-21!180;CL:0000222!3.35e-15!119;CL:0000192!6.57e-15!42;CL:0000514!6.57e-15!42;CL:0000359!1.35e-14!32;CL:0000066!1.46e-14!254;CL:0000548!1.95e-13!679;CL:0000004!1.95e-13!679;CL:0000255!1.95e-13!679;CL:0000680!4.75e-13!57;CL:0000056!4.75e-13!57;CL:0000355!4.75e-13!57;CL:0000012!8.36e-13!682;CL:0000183!4.11e-12!59;CL:0000187!7.61e-12!54;CL:0000393!6.03e-10!60;CL:0000211!6.03e-10!60;CL:0000057!1.28e-09!75;CL:0000144!3.09e-08!625;CL:0002539!8.91e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.24e-15;32!CL:0000192;3.18e-10;43!CL:0002539;1.65e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.68e-20,250;CL:0000359,6.77e-16,32;CL:0000192,1.65e-14,43;CL:0000514,1.65e-14,43;CL:0000222,3.71e-14,121;CL:0000680,3.42e-11,58;CL:0000056,3.42e-11,58;CL:0000355,3.42e-11,58;CL:0000187,6.03e-10,55;CL:0000066,8.20e-10,253;CL:0000057,3.69e-09,76;CL:0000393,2.52e-08,61;CL:0000211,2.52e-08,61;CL:0002539,1.64e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.18e-10;43 | |||
|ontology_enrichment_disease=DOID:0050687!6.58e-10!143;DOID:2394!1.50e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.56e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.16e-08,14;DOID:0050687,7.72e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002100!4.89e-19!216;UBERON:0002049!8.33e-17!79;UBERON:0007798!8.33e-17!79;UBERON:0001981!3.92e-16!60;UBERON:0007500!3.92e-16!60;UBERON:0004537!3.92e-16!60;UBERON:0006965!3.92e-16!60;UBERON:0000055!4.53e-16!69;UBERON:0003914!5.83e-16!118;UBERON:0001637!1.41e-15!42;UBERON:0003509!1.41e-15!42;UBERON:0004572!1.41e-15!42;UBERON:0005256!1.53e-15!143;UBERON:0003104!6.55e-14!238;UBERON:0009142!6.55e-14!238;UBERON:0004872!1.08e-13!84;UBERON:0000490!1.27e-13!138;UBERON:0004573!3.06e-13!33;UBERON:0004571!3.06e-13!33;UBERON:0000468!3.60e-13!659;UBERON:0000475!7.94e-13!365;UBERON:0000486!1.46e-11!82;UBERON:0000914!1.58e-11!83;UBERON:0002329!1.58e-11!83;UBERON:0003077!1.58e-11!83;UBERON:0003059!1.58e-11!83;UBERON:0007282!1.58e-11!83;UBERON:0009618!1.58e-11!83;UBERON:0007285!1.58e-11!83;UBERON:0004290!4.30e-11!70;UBERON:0001134!1.20e-10!61;UBERON:0002036!1.20e-10!61;UBERON:0003082!1.20e-10!61;UBERON:0002385!4.15e-10!63;UBERON:0001015!4.15e-10!63;UBERON:0000383!4.15e-10!63;UBERON:0000467!2.56e-09!625;UBERON:0004535!3.14e-09!110;UBERON:0000480!4.25e-09!626;UBERON:0001009!4.61e-09!113;UBERON:0000481!5.74e-09!347;UBERON:0000119!1.86e-08!312;UBERON:0000483!2.18e-08!309;UBERON:0003102!2.44e-08!95;UBERON:0000926!2.45e-08!448;UBERON:0004120!2.45e-08!448;UBERON:0006603!2.45e-08!448;UBERON:0000947!3.94e-08!21;UBERON:0010191!3.94e-08!21;UBERON:0009569!8.81e-08!113;UBERON:0000477!2.73e-07!286;UBERON:0004111!3.93e-07!241;UBERON:0002050!5.19e-07!605;UBERON:0005423!5.19e-07!605;UBERON:0000923!5.26e-07!604;UBERON:0005291!5.26e-07!604;UBERON:0006598!5.26e-07!604;UBERON:0002532!5.26e-07!604;UBERON:0000922!6.59e-07!612;UBERON:0004237!8.91e-07!10;UBERON:0004695!8.91e-07!10;UBERON:0002111!8.91e-07!10;UBERON:0004178!8.91e-07!10;UBERON:0005156!9.47e-07!59;UBERON:0000990!9.47e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.11e-13;33!UBERON:0004571;5.11e-13;33!UBERON:0001637;1.85e-12;42!UBERON:0003509;1.85e-12;42!UBERON:0004572;1.85e-12;42!UBERON:0007500;1.33e-09;56!UBERON:0001981;1.33e-09;56!UBERON:0004537;1.33e-09;56!UBERON:0003914;4.73e-09;74!UBERON:0000947;6.67e-09;21!UBERON:0010191;6.67e-09;21!UBERON:0000055;5.47e-08;65!UBERON:0004237;1.65e-07;10!UBERON:0004695;1.65e-07;10!UBERON:0002111;1.65e-07;10!UBERON:0004178;1.65e-07;10!UBERON:0002049;1.69e-07;75!UBERON:0007798;1.69e-07;75 | |||
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|phase1_expression=6.35874327446948,6.63711624062048,1.9733616573436,9.00659685178174,2.23480547213644,4.36169262050184,2.53299878168311,3.15859936713415,0.522371256399677,2.7030733015166,1.39560233594486,1.52908960491121,5.01157258634062,1.11389717664042,2.98257638155124,24.8760304187157,18.6835303687433,24.1002329827833,32.691497518964,1.10808952269109,2.65200898617529,0.940364164434263,0.572471974262113,3.01123735160345,1.00434111675842,0,0,0,0,0,0,0.919421224478927,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0.722878304769133,0,1.59331170856906,0,0.973269740605272,1.60709189178915,5.98669373148923,1.40535657109002,0.196468613246569,0.728590576585084,1.85392221392215,0.649094787309367,0.174129737299267,0.797747763113191,0,0,0,2.38514888840046,2.58070378531837,2.42998351125316,1.13061588384802,2.51699661725944,1.10047216776027,1.04497483268405,4.39308490587859,1.77883131343355,0,7.25092770796465,7.60272105718513,1.70843440283719,4.41195696415042,2.43042584364528,1.16089646769304,1.12264686313085,0.788280363383256,1.53316637465883,0.949265659568129,1.64881569537367,0,0,0.872188104285069,10.4364109856017,5.69837302490609,4.10468460520978,3.44203944898576,3.90135220418193,0.560677600142307,1.06748995729705,4.9333509683432,0.933633106199299,2.2900814251847,2.28846664358842,0.454072282934794,0.576175924479999,0,5.93104145977609,0,4.78235777765763,1.17434498643765,0.971237666208789,0.98315564691574,6.1246251376468,2.94802361548243,0.619954687054593,5.94001428641027,9.39614331258516,0.910161361938026,4.31170885089743,1.17835279767846,0.625592599359821,1.10825646193673,3.95079858792754,7.35570709917647,3.90618953157152,2.1552114800404,2.51145489964407,1.49490172172997,1.05965950579781,3.90118424909723,1.75189299705346,1.8034837803194,1.8611685633159,3.88185564154912,1.94874010322397,1.26216887122057,1.56484827691909,1.13152239773168,2.84007674013291,4.53384442024381,1.52604533079439,1.73934767846967,1.36373060295417,1.72082757233402,0.731842236777572,0.662648841607426,0.580969714347592,0.725627385107593,1.00928340350251,1.45990943630332,3.12899064659632,3.85944562915731,1.38134921352481,8.8229906326076,15.1594691150613,0.828147600278907,0.505754070234305,0.482022059766964,0.441175890929576,0.435758888184812,0.71181185733329,0.674156540800822,0.588664395376038,0.38474715694639,2.21446636387394,4.20725321410337,0,1.47008711385542,1.26755034821831,0,0,0,0.983907508344908,3.25978839567199,3.07300799144152,0,0.502644862058154,1.38882667737794,0.977424915930974,1.03993478527958,8.6598805215164,0.231860809950154,0.939269553886573,1.87676382089396,4.1668696131895,5.51737041480335,3.95102198979638,1.71697232418975,0.246217006087397,1.17002132569619,1.78357394746474,3.74935335947108,0.503946384596579,1.27597587518148,1.97028749946266,0.871901815541886,0.766765358330422,0,0,0.414656231081544,1.00883967391873,0.12624243342638,5.14332943766569,3.05590740446622,0,6.84289784090821,7.71206195274926,34.2391085942066,8.00314011365619,0.336393253036082,1.30788020649984,2.12681028880755,5.04159691455333,0,1.690605505112,2.92531928243358,9.36066932202295,0.514414748524284,4.25547396069835,1.5985330740966,0.142977993658148,1.62786481617433,0,1.62868092146868,1.77695974371273,1.58390374586686,1.80863626235752,1.74306691720059,1.49959486773086,2.43247561282381,0,4.21667878966063,2.63587341040741,1.14861935834114,2.85273810081437,11.8720671467415,6.36976599906189,2.86497541183833,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,3.7977103317963,2.28767947683888,3.03329280955175,2.20783381047509,1.28855556491985,2.40756879782175,9.09630016223939,0,0.664225598535437,1.29058417979192,4.43106433787223,1.17480694477644,0.343143423810856,0,0,0,0.606255142892519,1.66435439510497,1.81434175997808,5.45837177201309,6.29194090481056,8.70046292742528,3.20347873139252,3.07024349440022,4.3430558708774,4.45254199334973,3.23840356985577,1.77561725313127,1.47828880824856,2.07701771673448,8.36714724911707,3.38406458856542,6.21570057940183,1.56537681191024,2.75554675595056,4.55227920016793,2.62248829918848,5.86559496779635,4.6979355633693,1.56869953835371,1.46139224653261,2.53323909342902,0,5.4429985688485,1.72732732881711,0,1.89662506280697,2.50844886927427,3.05851527654046,4.15538004464362,4.02974558499921,0,0,5.12900250232778,5.24823433119529,1.95227036798582,0.309123034943167,0,0,1.14853107599234,1.95018073810956,3.21367859688319,1.16004861950546,0.770243085573222,1.07452572308291,2.20538515975249,0.322260734604821,0.725083469571143,0.852266274161009,0.267096106940212,2.31398881505369,3.0750410778417,0.765676274967505,0.6069466851333,13.9453664789186,5.03699754929024,6.970372701606,5.23657086299351,3.72614221221915,3.4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| ||
|short_description=p@chr11:69468195..69468212,+ | |||
}} | }} |
Latest revision as of 01:58, 24 July 2015
Short description: | p@chr11:69468195..69468212, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:69468195..69468212, + |
Coexpression cluster: | C807_neuroectodermal_renal_leiomyoma_Smooth_neuroblastoma_Aortic_Melanocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.68e-20 | 250 |
vascular associated smooth muscle cell | 6.77e-16 | 32 |
smooth muscle cell | 1.65e-14 | 43 |
smooth muscle myoblast | 1.65e-14 | 43 |
mesodermal cell | 3.71e-14 | 121 |
muscle precursor cell | 3.42e-11 | 58 |
myoblast | 3.42e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.42e-11 | 58 |
muscle cell | 6.03e-10 | 55 |
epithelial cell | 8.20e-10 | 253 |
fibroblast | 3.69e-09 | 76 |
electrically responsive cell | 2.52e-08 | 61 |
electrically active cell | 2.52e-08 | 61 |
aortic smooth muscle cell | 1.64e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.16e-08 | 14 |
cell type cancer | 7.72e-07 | 143 |