FFCP PHASE1:Hg19::chr17:43565226..43565229,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9842 | |EntrezGene=9842 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29017 | |HGNC=29017 | ||
|TSSclassifier=strong | |||
|UniProt=B4DRX1 | |UniProt=B4DRX1 | ||
|association_with_transcript=-2bp_to_ENST00000446609,uc010wjn.1_5end | |association_with_transcript=-2bp_to_ENST00000446609,uc010wjn.1_5end | ||
|cluster_id=chr17:43565226..43565229,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_PLEKHM1_5end | |description=CAGE_peak_3_at_PLEKHM1_5end | ||
|id=chr17:43565226..43565229,- | |id=chr17:43565226..43565229,- | ||
|ontology_enrichment_celltype=CL:0002057!5.26e-23!42;CL:0000860!6.30e-21!45;CL:0002009!2.63e-15!65;CL:0002194!7.95e-15!63;CL:0000576!7.95e-15!63;CL:0000040!7.95e-15!63;CL:0000559!7.95e-15!63;CL:0000557!2.48e-13!71;CL:0000839!1.44e-12!70;CL:0000766!5.57e-11!76;CL:0002621!8.84e-07!3 | |ontology_enrichment_celltype=CL:0002057!5.26e-23!42;CL:0000860!6.30e-21!45;CL:0002009!2.63e-15!65;CL:0002194!7.95e-15!63;CL:0000576!7.95e-15!63;CL:0000040!7.95e-15!63;CL:0000559!7.95e-15!63;CL:0000557!2.48e-13!71;CL:0000839!1.44e-12!70;CL:0000766!5.57e-11!76;CL:0002621!8.84e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.17e-50;33!CL:0002057;1.17e-50;33!CL:0000473;6.18e-36;39!CL:0000234;6.18e-36;39!CL:0000576;2.44e-24;48!CL:0000766;1.07e-13;69!CL:0002621;2.62e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.10e-41,42;CL:0002057,1.10e-41,42;CL:0000473,4.80e-36,48;CL:0000234,4.80e-36,48;CL:0002194,3.78e-28,59;CL:0000576,3.78e-28,59;CL:0000040,3.78e-28,59;CL:0000559,3.78e-28,59;CL:0002009,3.95e-27,61;CL:0000839,7.57e-25,66;CL:0000557,1.97e-24,67;CL:0000766,1.60e-22,72;CL:0000763,6.09e-14,108;CL:0000049,6.09e-14,108;CL:0002087,6.82e-13,115;CL:0002031,3.22e-12,120;CL:0000738,2.16e-10,136;CL:0002621,2.12e-09,3;CL:0002032,2.89e-08,161;CL:0000837,2.89e-08,161;CL:0000037,8.76e-08,168;CL:0000988,3.20e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.35e-33;42!UBERON:0009143;7.45e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.06e-12!80;UBERON:0002405!5.59e-11!115;UBERON:0002193!1.22e-10!112;UBERON:0001474!1.49e-10!86;UBERON:0004765!2.75e-09!101;UBERON:0001434!2.75e-09!101;UBERON:0002390!4.47e-09!102;UBERON:0003061!4.47e-09!102;UBERON:0001949!8.84e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.62e-09;3!UBERON:0001949;2.62e-09;3!UBERON:0001033;2.62e-09;3!UBERON:0002372;7.45e-08;1!UBERON:0001961;7.45e-08;1!UBERON:0001744;7.45e-08;1!UBERON:0001042;7.45e-08;1!UBERON:0001735;7.45e-08;1!UBERON:0005795;1.35e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.60e-21,93;UBERON:0002371,3.59e-21,76;UBERON:0001474,2.16e-19,82;UBERON:0002193,7.56e-18,108;UBERON:0004765,2.21e-17,90;UBERON:0002390,1.07e-15,98;UBERON:0003061,1.07e-15,98;UBERON:0001434,2.55e-15,100;UBERON:0001949,2.12e-09,3;UBERON:0001723,2.51e-09,3;UBERON:0001033,2.51e-09,3;UBERON:0010056,2.51e-09,3;UBERON:0002372,7.45e-08,1;UBERON:0001961,7.45e-08,1;UBERON:0001744,7.45e-08,1;UBERON:0001735,7.45e-08,1;UBERON:0002204,7.52e-08,167;UBERON:0000166,4.87e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0.257575567634187,0.290796477559129,0.377875943688809,0.485168122375632,3.71886459049095,6.16751832032739,6.19412741790207,2.8769239232215,6.91633907628572,1.18241114944293,8.27389633767885,10.3277549373412,17.6054432572644,1.88242339542605,1.91034305040492,1.57306439111559,1.53041946185451,0,0,0.329851300186716,0.598390972864896,0,0,1.70215567407342,0.622822248995575,6.53246529667532,12.5155900420848,5.2125322729228,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.208994966536811,2.06733407335463,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0.949265659568129,0.916008719652036,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,1.63647672354501,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0.768251997860379,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,0,0.34779121492523,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89318329189736,0,0,0,0.451199612907412,0.385076685522074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.614321404198464,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,8.3654246567162,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0.171986032471617,0,0,0,2.32773639572207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.378806010550178,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770479321629213,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0.245772908753719,0.633936370075881,0,0,0,0,0,3.35710818526667,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0,0,0,0.236664001461131,0.340853619036631,0,0,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13233981900981,0,0.0645889098360061,0.248298857183432,0.112131862580613,0,0,1.52401723527873,1.71116650542641,2.1552656964668,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,1.22068853494722,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0.257575567634187,0.290796477559129,0.377875943688809,0.485168122375632,3.71886459049095,6.16751832032739,6.19412741790207,2.8769239232215,6.91633907628572,1.18241114944293,8.27389633767885,10.3277549373412,17.6054432572644,1.88242339542605,1.91034305040492,1.57306439111559,1.53041946185451,0,0,0.329851300186716,0.598390972864896,0,0,1.70215567407342,0.622822248995575,6.53246529667532,12.5155900420848,5.2125322729228,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.208994966536811,2.06733407335463,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0.949265659568129,0.916008719652036,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,1.63647672354501,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0.768251997860379,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,0,0.34779121492523,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89318329189736,0,0,0,0.451199612907412,0.385076685522074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.614321404198464,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,8.3654246567162,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0.171986032471617,0,0,0,2.32773639572207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.378806010550178,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770479321629213,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0.245772908753719,0.633936370075881,0,0,0,0,0,3.35710818526667,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0,0,0,0.236664001461131,0.340853619036631,0,0,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13233981900981,0,0.0645889098360061,0.248298857183432,0.112131862580613,0,0,1.52401723527873,1.71116650542641,2.1552656964668,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,1.22068853494722,0.665756774185513,0,0 | ||
|short_description=p3@PLEKHM1 | |short_description=p3@PLEKHM1 | ||
}} | }} |
Latest revision as of 01:54, 25 September 2015
Short description: | p3@PLEKHM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLEKHM1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -2bp_to_ENST00000446609, uc010wjn.1_5end |
EntrezGene: | PLEKHM1 |
HGNC: | 29017 |
UniProt: | B4DRX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.10e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.10e-41 | 42 |
defensive cell | 4.80e-36 | 48 |
phagocyte | 4.80e-36 | 48 |
monopoietic cell | 3.78e-28 | 59 |
monocyte | 3.78e-28 | 59 |
monoblast | 3.78e-28 | 59 |
promonocyte | 3.78e-28 | 59 |
macrophage dendritic cell progenitor | 3.95e-27 | 61 |
myeloid lineage restricted progenitor cell | 7.57e-25 | 66 |
granulocyte monocyte progenitor cell | 1.97e-24 | 67 |
myeloid leukocyte | 1.60e-22 | 72 |
myeloid cell | 6.09e-14 | 108 |
common myeloid progenitor | 6.09e-14 | 108 |
nongranular leukocyte | 6.82e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 3.22e-12 | 120 |
leukocyte | 2.16e-10 | 136 |
gingival epithelial cell | 2.12e-09 | 3 |
hematopoietic oligopotent progenitor cell | 2.89e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.89e-08 | 161 |
hematopoietic stem cell | 8.76e-08 | 168 |
hematopoietic cell | 3.20e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.60e-21 | 93 |
bone marrow | 3.59e-21 | 76 |
bone element | 2.16e-19 | 82 |
hemolymphoid system | 7.56e-18 | 108 |
skeletal element | 2.21e-17 | 90 |
hematopoietic system | 1.07e-15 | 98 |
blood island | 1.07e-15 | 98 |
skeletal system | 2.55e-15 | 100 |
gingival epithelium | 2.12e-09 | 3 |
tongue | 2.51e-09 | 3 |
gustatory system | 2.51e-09 | 3 |
future tongue | 2.51e-09 | 3 |
tonsil | 7.45e-08 | 1 |
mucosa-associated lymphoid tissue | 7.45e-08 | 1 |
lymphoid tissue | 7.45e-08 | 1 |
tonsillar ring | 7.45e-08 | 1 |
musculoskeletal system | 7.52e-08 | 167 |
oral opening | 4.87e-07 | 22 |