FFCP PHASE1:Hg19::chr22:50354471..50354483,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=415116 | |EntrezGene=415116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19310 | |HGNC=19310 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_ENST00000467480_5end | |association_with_transcript=55bp_to_ENST00000467480_5end | ||
|cluster_id=chr22:50354471..50354483,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_PIM3_5end | |description=CAGE_peak_4_at_PIM3_5end | ||
|id=chr22:50354471..50354483,+ | |id=chr22:50354471..50354483,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.79e-31!140;CL:0000766!5.08e-27!76;CL:0002057!2.00e-24!42;CL:0000557!1.13e-23!71;CL:0000860!6.04e-23!45;CL:0002087!4.37e-22!119;CL:0002009!6.21e-22!65;CL:0002031!6.34e-22!124;CL:0000037!1.78e-21!172;CL:0000566!1.78e-21!172;CL:0000988!3.51e-21!182;CL:0002194!9.39e-21!63;CL:0000576!9.39e-21!63;CL:0000040!9.39e-21!63;CL:0000559!9.39e-21!63;CL:0000839!3.75e-20!70;CL:0002032!3.57e-19!165;CL:0000837!3.57e-19!165;CL:0000763!1.10e-16!112;CL:0000049!1.10e-16!112;CL:0000115!3.06e-11!35;CL:0002139!1.02e-10!24;CL:0000063!4.65e-10!578;CL:0000071!3.97e-09!18;CL:0002546!3.97e-09!18;CL:0002078!1.04e-08!44;CL:0000213!3.85e-07!57;CL:0000215!3.85e-07!57;CL:0000451!8.46e-07!10;CL:0000094!9.20e-07!8;CL:0002393!9.43e-07!9;CL:0002397!9.43e-07!9 | |ontology_enrichment_celltype=CL:0000738!1.79e-31!140;CL:0000766!5.08e-27!76;CL:0002057!2.00e-24!42;CL:0000557!1.13e-23!71;CL:0000860!6.04e-23!45;CL:0002087!4.37e-22!119;CL:0002009!6.21e-22!65;CL:0002031!6.34e-22!124;CL:0000037!1.78e-21!172;CL:0000566!1.78e-21!172;CL:0000988!3.51e-21!182;CL:0002194!9.39e-21!63;CL:0000576!9.39e-21!63;CL:0000040!9.39e-21!63;CL:0000559!9.39e-21!63;CL:0000839!3.75e-20!70;CL:0002032!3.57e-19!165;CL:0000837!3.57e-19!165;CL:0000763!1.10e-16!112;CL:0000049!1.10e-16!112;CL:0000115!3.06e-11!35;CL:0002139!1.02e-10!24;CL:0000063!4.65e-10!578;CL:0000071!3.97e-09!18;CL:0002546!3.97e-09!18;CL:0002078!1.04e-08!44;CL:0000213!3.85e-07!57;CL:0000215!3.85e-07!57;CL:0000451!8.46e-07!10;CL:0000094!9.20e-07!8;CL:0002393!9.43e-07!9;CL:0002397!9.43e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.09e-20;33!CL:0002057;1.09e-20;33!CL:0000473;5.98e-18;39!CL:0000234;5.98e-18;39!CL:0000576;7.73e-16;48!CL:0000766;1.25e-14;69!CL:0002139;1.57e-12;24!CL:0000115;7.66e-11;36!CL:0000071;1.11e-10;18!CL:0002087;1.38e-08;104!CL:0000738;2.53e-08;136!CL:0000094;7.31e-08;8!CL:0000451;8.16e-08;10!CL:0000081;4.57e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.79e-36,136;CL:0000766,2.18e-33,72;CL:0000473,1.47e-29,48;CL:0000234,1.47e-29,48;CL:0000557,2.75e-29,67;CL:0000860,6.30e-29,42;CL:0002057,6.30e-29,42;CL:0002009,1.45e-27,61;CL:0002194,4.08e-26,59;CL:0000576,4.08e-26,59;CL:0000040,4.08e-26,59;CL:0000559,4.08e-26,59;CL:0002031,5.99e-26,120;CL:0002087,9.31e-26,115;CL:0000839,1.59e-25,66;CL:0000988,2.14e-24,177;CL:0000037,2.29e-24,168;CL:0002032,5.79e-22,161;CL:0000837,5.79e-22,161;CL:0000763,4.07e-20,108;CL:0000049,4.07e-20,108;CL:0000115,1.54e-12,36;CL:0002139,1.63e-12,24;CL:0000071,1.30e-10,18;CL:0002546,1.30e-10,18;CL:0002078,1.31e-08,45;CL:0000451,7.84e-08,10;CL:0000094,8.66e-08,8;CL:0002393,8.92e-08,9;CL:0002397,8.92e-08,9;CL:0000213,3.43e-07,58;CL:0000215,3.43e-07,58;CL:0000081,7.39e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.59e-21;42!CL:0002546;1.11e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.75e-22!112;UBERON:0002390!1.24e-21!102;UBERON:0003061!1.24e-21!102;UBERON:0002371!8.13e-20!80;UBERON:0001474!4.97e-19!86;UBERON:0002405!5.08e-17!115;UBERON:0003081!1.75e-16!216;UBERON:0004765!9.35e-14!101;UBERON:0001434!9.35e-14!101;UBERON:0001986!3.97e-09!18;UBERON:0004638!3.97e-09!18;UBERON:0004852!3.97e-09!18;UBERON:0000926!6.81e-07!448;UBERON:0004120!6.81e-07!448;UBERON:0006603!6.81e-07!448;UBERON:0000487!7.75e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.11e-10;18!UBERON:0001986;1.11e-10;18!UBERON:0004852;1.11e-10;18!UBERON:0000487;5.01e-08;22!UBERON:0006914;5.24e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.63e-25,108;UBERON:0002390,1.66e-24,98;UBERON:0003061,1.66e-24,98;UBERON:0002371,2.31e-24,76;UBERON:0001474,1.68e-22,82;UBERON:0002405,6.64e-22,93;UBERON:0004765,6.65e-20,90;UBERON:0003081,3.52e-18,203;UBERON:0001434,9.34e-16,100;UBERON:0004638,1.30e-10,18;UBERON:0001986,1.30e-10,18;UBERON:0004852,1.30e-10,18;UBERON:0000487,4.75e-08,22;UBERON:0006914,5.49e-07,25 | |||
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| ||
|short_description=p4@PIM3 | |short_description=p4@PIM3 | ||
}} | }} |
Latest revision as of 17:55, 15 September 2015
Short description: | p4@PIM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PIM3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 55bp_to_ENST00000467480_5end |
EntrezGene: | PIM3 |
HGNC: | 19310 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.63e-25 | 108 |
hematopoietic system | 1.66e-24 | 98 |
blood island | 1.66e-24 | 98 |
bone marrow | 2.31e-24 | 76 |
bone element | 1.68e-22 | 82 |
immune system | 6.64e-22 | 93 |
skeletal element | 6.65e-20 | 90 |
lateral plate mesoderm | 3.52e-18 | 203 |
skeletal system | 9.34e-16 | 100 |
blood vessel endothelium | 1.30e-10 | 18 |
endothelium | 1.30e-10 | 18 |
cardiovascular system endothelium | 1.30e-10 | 18 |
simple squamous epithelium | 4.75e-08 | 22 |
squamous epithelium | 5.49e-07 | 25 |