FFCP PHASE1:Hg19::chr2:191745535..191745555,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2744 | |EntrezGene=2744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4331 | |HGNC=4331 | ||
|TSSclassifier=strong | |||
|UniProt=O94925 | |UniProt=O94925 | ||
|association_with_transcript=0bp_to_ENST00000320717,NM_014905,uc002usd.2,uc002use.2,uc002usf.2_5end | |association_with_transcript=0bp_to_ENST00000320717,NM_014905,uc002usd.2,uc002use.2,uc002usf.2_5end | ||
|cluster_id=chr2:191745535..191745555,+ | |||
|coexpression_cluster_id=C4161 | |||
|description=CAGE_peak_1_at_GLS_5end | |description=CAGE_peak_1_at_GLS_5end | ||
|id=chr2:191745535..191745555,+ | |id=chr2:191745535..191745555,+ | ||
|ontology_enrichment_celltype=CL:0000134!2.26e-12!358;CL:0002320!1.93e-10!365;CL:0000738!7.99e-10!140;CL:0002031!3.41e-08!124;CL:0002087!3.63e-08!119;CL:0000219!1.76e-07!390;CL:0000838!2.20e-07!52;CL:0000542!3.60e-07!53;CL:0000051!3.60e-07!53 | |ontology_enrichment_celltype=CL:0000134!2.26e-12!358;CL:0002320!1.93e-10!365;CL:0000738!7.99e-10!140;CL:0002031!3.41e-08!124;CL:0002087!3.63e-08!119;CL:0000219!1.76e-07!390;CL:0000838!2.20e-07!52;CL:0000542!3.60e-07!53;CL:0000051!3.60e-07!53 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000134,1.82e-13,354;CL:0002320,1.99e-11,361;CL:0000738,1.36e-10,136;CL:0002031,6.36e-09,120;CL:0002087,6.50e-09,115;CL:0000219,2.82e-08,386;CL:0000838,2.20e-07,52;CL:0000542,3.60e-07,53;CL:0000051,3.60e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.03e-10!375;UBERON:0002619!1.32e-09!22;UBERON:0001869!6.23e-09!32;UBERON:0001950!7.36e-09!20;UBERON:0002020!1.63e-08!34;UBERON:0003528!1.63e-08!34;UBERON:0001893!7.42e-08!34;UBERON:0003080!7.55e-08!42;UBERON:0002616!1.01e-07!59;UBERON:0001049!1.18e-07!57;UBERON:0005068!1.18e-07!57;UBERON:0006241!1.18e-07!57;UBERON:0007135!1.18e-07!57;UBERON:0002791!1.57e-07!33;UBERON:0000956!1.67e-07!25;UBERON:0000203!1.67e-07!25;UBERON:0002780!1.77e-07!41;UBERON:0001890!1.77e-07!41;UBERON:0006240!1.77e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.32e-09;22!UBERON:0001950;7.35e-09;20!UBERON:0001869;3.93e-08;32!UBERON:0003528;1.40e-07;34!UBERON:0002020;1.40e-07;34!UBERON:0002791;1.65e-07;32!UBERON:0000956;1.69e-07;25!UBERON:0000203;1.69e-07;25!UBERON:0001893;6.62e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.26e-11,371;UBERON:0002619,1.32e-09,22;UBERON:0001869,6.23e-09,32;UBERON:0001950,7.36e-09,20;UBERON:0003528,1.63e-08,34;UBERON:0002020,1.63e-08,34;UBERON:0002791,3.71e-08,32;UBERON:0001893,7.42e-08,34;UBERON:0000073,7.72e-08,53;UBERON:0002616,7.72e-08,53;UBERON:0000956,1.67e-07,25;UBERON:0000203,1.67e-07,25;UBERON:0002780,1.77e-07,41;UBERON:0001890,1.77e-07,41;UBERON:0003080,1.77e-07,41;UBERON:0006240,1.77e-07,41;UBERON:0001049,2.56e-07,56;UBERON:0005068,2.56e-07,56;UBERON:0006241,2.56e-07,56;UBERON:0007135,2.56e-07,56 | |||
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| ||
|short_description=p1@GLS | |short_description=p1@GLS | ||
}} | }} |
Latest revision as of 03:46, 19 September 2015
Short description: | p1@GLS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLS_5end |
Coexpression cluster: | C4161_Preadipocyte_migratory_Fibroblast_Smooth_Olfactory_endometrial_Adipocyte |
Association with transcript: | 0bp_to_ENST00000320717, NM_014905, uc002usd.2, uc002use.2, uc002usf.2_5end |
EntrezGene: | GLS |
HGNC: | 4331 |
UniProt: | O94925 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal cell | 1.82e-13 | 354 |
connective tissue cell | 1.99e-11 | 361 |
leukocyte | 1.36e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 6.36e-09 | 120 |
nongranular leukocyte | 6.50e-09 | 115 |
motile cell | 2.82e-08 | 386 |
lymphoid lineage restricted progenitor cell | 2.20e-07 | 52 |
lymphocyte | 3.60e-07 | 53 |
common lymphoid progenitor | 3.60e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.26e-11 | 371 |
regional part of cerebral cortex | 1.32e-09 | 22 |
cerebral hemisphere | 6.23e-09 | 32 |
neocortex | 7.36e-09 | 20 |
brain grey matter | 1.63e-08 | 34 |
gray matter | 1.63e-08 | 34 |
regional part of telencephalon | 3.71e-08 | 32 |
telencephalon | 7.42e-08 | 34 |
regional part of nervous system | 7.72e-08 | 53 |
regional part of brain | 7.72e-08 | 53 |
cerebral cortex | 1.67e-07 | 25 |
pallium | 1.67e-07 | 25 |
regional part of forebrain | 1.77e-07 | 41 |
forebrain | 1.77e-07 | 41 |
anterior neural tube | 1.77e-07 | 41 |
future forebrain | 1.77e-07 | 41 |
neural tube | 2.56e-07 | 56 |
neural rod | 2.56e-07 | 56 |
future spinal cord | 2.56e-07 | 56 |
neural keel | 2.56e-07 | 56 |