FFCP PHASE1:Hg19::chr18:20143107..20143124,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:20143107..20143124,- | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr18:20143107..20143124,- | |description=CAGE_peak_at_chr18:20143107..20143124,- | ||
|id=chr18:20143107..20143124,- | |id=chr18:20143107..20143124,- | ||
|ontology_enrichment_celltype=CL:0002494!8.97e-17!16;CL:1000306!1.03e-12!4;CL:0002547!1.03e-12!4;CL:0000569!5.34e-12!4;CL:0000011!5.34e-12!4;CL:0000077!1.08e-08!19;CL:0002548!4.06e-08!6 | |ontology_enrichment_celltype=CL:0002494!8.97e-17!16;CL:1000306!1.03e-12!4;CL:0002547!1.03e-12!4;CL:0000569!5.34e-12!4;CL:0000011!5.34e-12!4;CL:0000077!1.08e-08!19;CL:0002548!4.06e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:1000306;1.66e-15;4!CL:0002547;1.66e-15;4!CL:0002591;2.38e-15;1!CL:0002589;1.79e-08;2!CL:0000359;3.25e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.66e-15,4;CL:0002547,1.66e-15,4;CL:0002591,3.17e-15,1;CL:0002589,1.86e-08,2;CL:0000359,2.35e-07,32 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.38e-15;1!UBERON:0004140;2.38e-15;1 | |||
|ontology_enrichment_disease=DOID:2394!1.06e-19!14;DOID:120!4.87e-11!27;DOID:193!4.10e-10!29 | |ontology_enrichment_disease=DOID:2394!1.06e-19!14;DOID:120!4.87e-11!27;DOID:193!4.10e-10!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.95e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.26e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000948!2.23e-28!24;UBERON:0005498!2.23e-28!24;UBERON:0004140!2.23e-28!24;UBERON:0009881!2.23e-28!24;UBERON:0004141!2.23e-28!24;UBERON:0003084!2.23e-28!24;UBERON:0007005!2.23e-28!24;UBERON:0004139!2.23e-28!24;UBERON:0004291!2.23e-28!24;UBERON:0007100!9.44e-25!27;UBERON:0004872!2.97e-22!84;UBERON:0004535!3.13e-19!110;UBERON:0001009!1.70e-18!113;UBERON:0003914!1.87e-17!118;UBERON:0000415!1.03e-12!4;UBERON:0007240!1.03e-12!4;UBERON:0005742!1.03e-12!4;UBERON:0005734!1.03e-12!4;UBERON:0004664!1.03e-12!4;UBERON:0004663!1.03e-12!4;UBERON:0001981!4.34e-10!60;UBERON:0007500!4.34e-10!60;UBERON:0004537!4.34e-10!60;UBERON:0006965!4.34e-10!60;UBERON:0004145!6.05e-10!3;UBERON:0002049!8.12e-10!79;UBERON:0007798!8.12e-10!79;UBERON:0001637!3.15e-09!42;UBERON:0003509!3.15e-09!42;UBERON:0004572!3.15e-09!42;UBERON:0000055!2.98e-08!69;UBERON:0000025!3.53e-08!194;UBERON:0001048!4.28e-08!168;UBERON:0000992!1.38e-07!13;UBERON:0002081!1.89e-07!2;UBERON:0003103!2.74e-07!69;UBERON:0007497!4.32e-07!2;UBERON:0003643!4.32e-07!2;UBERON:0003504!4.32e-07!2;UBERON:0003469!4.32e-07!2;UBERON:0003496!4.32e-07!2;UBERON:0004797!4.32e-07!2;UBERON:0002012!4.32e-07!2;UBERON:0008886!4.32e-07!2;UBERON:0007303!4.32e-07!2;UBERON:0002061!4.32e-07!2;UBERON:0005432!4.32e-07!2;UBERON:0004363!4.32e-07!2;UBERON:0002119!4.90e-07!4;UBERON:0004531!4.90e-07!4;UBERON:0002133!6.38e-07!2;UBERON:0004111!7.61e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.66e-15;4!UBERON:0000415;1.66e-15;4!UBERON:0007240;1.66e-15;4!UBERON:0005742;1.66e-15;4!UBERON:0005734;1.66e-15;4!UBERON:0004664;1.66e-15;4!UBERON:0004663;1.66e-15;4!UBERON:0002079;2.38e-15;1!UBERON:0000947;3.23e-11;21!UBERON:0010191;3.23e-11;21!UBERON:0004573;1.26e-09;33!UBERON:0004571;1.26e-09;33!UBERON:0001529;1.79e-08;2!UBERON:0007204;1.79e-08;2!UBERON:0000078;2.48e-08;2!UBERON:0002081;2.48e-08;2!UBERON:0002012;2.48e-08;2!UBERON:0008886;2.48e-08;2!UBERON:0001637;3.36e-08;42!UBERON:0003509;3.36e-08;42!UBERON:0004572;3.36e-08;42!UBERON:0007500;5.36e-07;56!UBERON:0001981;5.36e-07;56!UBERON:0004537;5.36e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.66e-15,4;UBERON:0007240,1.66e-15,4;UBERON:0005742,1.66e-15,4;UBERON:0005734,1.66e-15,4;UBERON:0004664,1.66e-15,4;UBERON:0004663,1.66e-15,4;UBERON:0002079,2.38e-15,1;UBERON:0004872,6.24e-13,83;UBERON:0001637,5.60e-12,42;UBERON:0003509,5.60e-12,42;UBERON:0004572,5.60e-12,42;UBERON:0000947,2.94e-11,21;UBERON:0010191,2.94e-11,21;UBERON:0004573,7.02e-11,33;UBERON:0004571,7.02e-11,33;UBERON:0004535,1.25e-09,109;UBERON:0000948,1.42e-09,24;UBERON:0005498,1.42e-09,24;UBERON:0004140,1.42e-09,24;UBERON:0009881,1.42e-09,24;UBERON:0004141,1.42e-09,24;UBERON:0003084,1.42e-09,24;UBERON:0007005,1.42e-09,24;UBERON:0004139,1.42e-09,24;UBERON:0004291,1.42e-09,24;UBERON:0001009,2.39e-09,112;UBERON:0004797,2.92e-09,7;UBERON:0003914,6.58e-09,117;UBERON:0007100,1.55e-08,27;UBERON:0001529,1.86e-08,2;UBERON:0007204,1.86e-08,2;UBERON:0007500,1.92e-08,59;UBERON:0001981,1.92e-08,59;UBERON:0004537,1.92e-08,59;UBERON:0006965,1.92e-08,59;UBERON:0002081,2.48e-08,2;UBERON:0010227,2.48e-08,2;UBERON:0000078,2.87e-08,2;UBERON:0007497,2.87e-08,2;UBERON:0003643,2.87e-08,2;UBERON:0003504,2.87e-08,2;UBERON:0003469,2.87e-08,2;UBERON:0003496,2.87e-08,2;UBERON:0002012,2.87e-08,2;UBERON:0008886,2.87e-08,2;UBERON:0007303,2.87e-08,2;UBERON:0002061,2.87e-08,2;UBERON:0005432,2.87e-08,2;UBERON:0004363,2.87e-08,2;UBERON:0000055,2.78e-07,68 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,11.6520079115633,3.15520282823695,0.354668382198357,0.560677600142307,0,0.49333509683432,0.311211035399766,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,1.50719688529793,0.871533458600294,3.09916272664377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.459257792658427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85938219718914,2.83331112147576,0,0,0,0,0,2.57624796135584,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.565621727814851,1.13008116620243,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,1.41085292222125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0.453692771289717,0.15543720058278,0.443565449968902,0.318593534327405,0,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,3.90669783392768,5.33127297036314,1.62748293281865,0,0.107410557042488,0.928067519756987,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0.179088841081487,0,0.438568099157414,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,11.6520079115633,3.15520282823695,0.354668382198357,0.560677600142307,0,0.49333509683432,0.311211035399766,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,1.50719688529793,0.871533458600294,3.09916272664377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.459257792658427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85938219718914,2.83331112147576,0,0,0,0,0,2.57624796135584,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.565621727814851,1.13008116620243,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,1.41085292222125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0.453692771289717,0.15543720058278,0.443565449968902,0.318593534327405,0,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,3.90669783392768,5.33127297036314,1.62748293281865,0,0.107410557042488,0.928067519756987,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0.179088841081487,0,0.438568099157414,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr18:20143107..20143124,- | |short_description=p@chr18:20143107..20143124,- | ||
}} | }} |
Latest revision as of 23:54, 25 July 2015
Short description: | p@chr18:20143107..20143124, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:20143107..20143124, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.66e-15 | 4 |
fibroblast of the aortic adventitia | 1.66e-15 | 4 |
smooth muscle cell of the pulmonary artery | 3.17e-15 | 1 |
smooth muscle cell of the brachiocephalic vasculature | 1.86e-08 | 2 |
vascular associated smooth muscle cell | 2.35e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.26e-10 | 14 |