FFCP PHASE1:Hg19::chr18:41277165..41277186,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:41277165..41277186,- | |||
|description=CAGE_peak_at_chr18:41277165..41277186,- | |description=CAGE_peak_at_chr18:41277165..41277186,- | ||
|id=chr18:41277165..41277186,- | |id=chr18:41277165..41277186,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.21e-11;5!CL:0000062;7.42e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,9.26e-12,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.72e-14;1!DOID:4549;1.72e-14;1!DOID:5861;1.72e-14;1!DOID:6496;1.72e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.36e-15,1;DOID:4549,9.36e-15,1;DOID:5861,9.36e-15,1;DOID:6496,9.36e-15,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.72e-14;1!UBERON:0000026;1.72e-14;1!UBERON:0008784;1.72e-14;1!UBERON:0006058;1.72e-14;1!UBERON:0003663;1.72e-14;1!UBERON:0004256;1.72e-14;1!UBERON:0004708;1.72e-14;1!UBERON:0002101;1.72e-14;1!UBERON:0004709;1.72e-14;1!UBERON:0002529;1.72e-14;1!UBERON:0010538;1.72e-14;1!UBERON:0003661;1.72e-14;1!UBERON:0010890;1.72e-14;1!UBERON:0002471;1.72e-14;1!UBERON:0001383;1.72e-14;1!UBERON:0010758;1.72e-14;1!UBERON:0010707;1.72e-14;1!UBERON:0000978;1.72e-14;1!UBERON:0002103;1.72e-14;1!UBERON:0001665;1.72e-14;1!UBERON:0003823;1.72e-14;1!UBERON:0000154;1.72e-14;1!UBERON:0010709;1.72e-14;1!UBERON:0000305;1.42e-08;7!UBERON:0000341;4.23e-08;2!UBERON:0005090;6.80e-08;2!UBERON:0001630;6.80e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.61e-14,1;UBERON:0001389,1.61e-14,1;UBERON:0000026,1.61e-14,1;UBERON:0008784,1.61e-14,1;UBERON:0006058,1.61e-14,1;UBERON:0003663,1.61e-14,1;UBERON:0004256,1.61e-14,1;UBERON:0004708,1.61e-14,1;UBERON:0002101,1.61e-14,1;UBERON:0004709,1.61e-14,1;UBERON:0002529,1.61e-14,1;UBERON:0010538,1.61e-14,1;UBERON:0003661,1.61e-14,1;UBERON:0010890,1.61e-14,1;UBERON:0002471,1.61e-14,1;UBERON:0001383,1.61e-14,1;UBERON:0004357,1.61e-14,1;UBERON:0004347,1.61e-14,1;UBERON:0005420,1.61e-14,1;UBERON:0005732,1.61e-14,1;UBERON:0010758,1.61e-14,1;UBERON:0010707,1.61e-14,1;UBERON:0000978,1.61e-14,1;UBERON:0002103,1.61e-14,1;UBERON:0001665,1.61e-14,1;UBERON:0003823,1.61e-14,1;UBERON:0000154,1.61e-14,1;UBERON:0010709,1.61e-14,1;UBERON:0005733,1.61e-14,1;UBERON:0005730,1.61e-14,1;UBERON:0000305,1.17e-08,7;UBERON:0000341,4.38e-08,2;UBERON:0005090,6.58e-08,2;UBERON:0001630,6.58e-08,2;UBERON:0004871,1.11e-07,8 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.351339142772504,0,0,0.370784442784429,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,1.00034104211935,0,0,0.535286966391485,0.315404830067869,0.117141414992713,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0.213455115606889,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,1.29549549661284,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.322260734604821,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.876901770507525,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39705560002972,0,0.423347165447766,0,0,0,0.47003968731907,0,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0,0,0,0.390776190804081,0.278406173895242,0,0,0,0,0,0,0,0,0,1.67121139316383,0.890894042497916,2.76444631889309,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0,0.802577647298789,0,0,0,0,0.789168805698781,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0.0821154570532092,0,1.85337866052151,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0,1.14241563650639,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.694567422971502,0,0,0.308801447160972,0.438568099157414,0.176689145945881,0,0.168942440653073,0.512483037175893,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0.955538938977433,0,0,0,1.29485767437579,0,4.6392577253528,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0.743990036333503,0,0.432626562123789,0.126166424835079,0,0,0.305966489225945,0,0,0,0,0,0,0,0,2.3806443146374,0,0.0620747142958579,0.112131862580613,0,0,0.217716747896961,0.342233301085281,0,0,0.332660356546013,0,0.106727345877715,0,0.0898252021065869,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p@chr18:41277165..41277186,- | |short_description=p@chr18:41277165..41277186,- | ||
}} | }} |
Latest revision as of 00:56, 26 July 2015
Short description: | p@chr18:41277165..41277186, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:41277165..41277186, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 9.26e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 1.61e-14 | 1 |
soleus muscle | 1.61e-14 | 1 |
appendage | 1.61e-14 | 1 |
lower limb segment | 1.61e-14 | 1 |
multi-limb segment region | 1.61e-14 | 1 |
hindlimb muscle | 1.61e-14 | 1 |
hindlimb zeugopod muscle | 1.61e-14 | 1 |
paired limb/fin | 1.61e-14 | 1 |
limb | 1.61e-14 | 1 |
pelvic appendage | 1.61e-14 | 1 |
limb segment | 1.61e-14 | 1 |
paired limb/fin segment | 1.61e-14 | 1 |
limb muscle | 1.61e-14 | 1 |
pelvic complex muscle | 1.61e-14 | 1 |
zeugopod | 1.61e-14 | 1 |
muscle of leg | 1.61e-14 | 1 |
paired limb/fin bud | 1.61e-14 | 1 |
limb bud | 1.61e-14 | 1 |
pelvic appendage bud | 1.61e-14 | 1 |
limb/fin field | 1.61e-14 | 1 |
subdivision of organism along appendicular axis | 1.61e-14 | 1 |
appendage girdle complex | 1.61e-14 | 1 |
leg | 1.61e-14 | 1 |
hindlimb | 1.61e-14 | 1 |
triceps surae | 1.61e-14 | 1 |
hindlimb zeugopod | 1.61e-14 | 1 |
posterior region of body | 1.61e-14 | 1 |
pelvic complex | 1.61e-14 | 1 |
limb field | 1.61e-14 | 1 |
hindlimb/pelvic fin field | 1.61e-14 | 1 |
amnion | 1.17e-08 | 7 |
throat | 4.38e-08 | 2 |
muscle structure | 6.58e-08 | 2 |
muscle organ | 6.58e-08 | 2 |
somatic layer of lateral plate mesoderm | 1.11e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.36e-15 | 1 |
extraosseous chondrosarcoma | 9.36e-15 | 1 |
myxoid chondrosarcoma | 9.36e-15 | 1 |
extraskeletal myxoid chondrosarcoma | 9.36e-15 | 1 |