FFCP PHASE1:Hg19::chr2:218990735..218990757,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3579 | |EntrezGene=3579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6027 | |HGNC=6027 | ||
|TSSclassifier=strong | |||
|UniProt=C9JG19,P25025,Q53PC4 | |UniProt=C9JG19,P25025,Q53PC4 | ||
|association_with_transcript=0bp_to_ENST00000454148,NM_001557,uc002vha.1,uc002vhb.1_5end | |association_with_transcript=0bp_to_ENST00000454148,NM_001557,uc002vha.1,uc002vhb.1_5end | ||
|cluster_id=chr2:218990735..218990757,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_CXCR2_5end | |description=CAGE_peak_3_at_CXCR2_5end | ||
|id=chr2:218990735..218990757,+ | |id=chr2:218990735..218990757,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.20e-20!42;CL:0000766!2.66e-19!76;CL:0000763!3.83e-19!112;CL:0000049!3.83e-19!112;CL:0002032!8.58e-19!165;CL:0000837!8.58e-19!165;CL:0000037!1.49e-18!172;CL:0000566!1.49e-18!172;CL:0000860!1.11e-17!45;CL:0000988!3.30e-16!182;CL:0000738!5.52e-16!140;CL:0002194!1.32e-15!63;CL:0000576!1.32e-15!63;CL:0000040!1.32e-15!63;CL:0000559!1.32e-15!63;CL:0002009!9.58e-15!65;CL:0002087!1.02e-14!119;CL:0000839!7.95e-13!70;CL:0000557!1.77e-12!71;CL:0002031!5.23e-12!124;CL:0000094!2.45e-09!8 | |ontology_enrichment_celltype=CL:0002057!9.20e-20!42;CL:0000766!2.66e-19!76;CL:0000763!3.83e-19!112;CL:0000049!3.83e-19!112;CL:0002032!8.58e-19!165;CL:0000837!8.58e-19!165;CL:0000037!1.49e-18!172;CL:0000566!1.49e-18!172;CL:0000860!1.11e-17!45;CL:0000988!3.30e-16!182;CL:0000738!5.52e-16!140;CL:0002194!1.32e-15!63;CL:0000576!1.32e-15!63;CL:0000040!1.32e-15!63;CL:0000559!1.32e-15!63;CL:0002009!9.58e-15!65;CL:0002087!1.02e-14!119;CL:0000839!7.95e-13!70;CL:0000557!1.77e-12!71;CL:0002031!5.23e-12!124;CL:0000094!2.45e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.52e-20;33!CL:0002057;6.52e-20;33!CL:0000473;1.21e-13;39!CL:0000234;1.21e-13;39!CL:0000576;6.98e-12;48!CL:0000094;1.86e-11;8!CL:0000775;4.58e-09;3!CL:0000766;2.35e-08;69!CL:0000081;4.46e-08;11!CL:0000763;8.31e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.91e-19,72;CL:0000763,1.30e-16,108;CL:0000049,1.30e-16,108;CL:0002032,3.33e-16,161;CL:0000837,3.33e-16,161;CL:0000860,4.21e-16,42;CL:0002057,4.21e-16,42;CL:0000037,4.45e-16,168;CL:0000738,1.84e-15,136;CL:0000988,1.14e-14,177;CL:0002194,9.46e-14,59;CL:0000576,9.46e-14,59;CL:0000040,9.46e-14,59;CL:0000559,9.46e-14,59;CL:0000473,1.96e-13,48;CL:0000234,1.96e-13,48;CL:0002009,4.10e-13,61;CL:0002087,1.25e-12,115;CL:0000839,1.08e-11,66;CL:0000094,1.71e-11,8;CL:0000557,1.95e-11,67;CL:0002031,8.89e-11,120;CL:0000775,4.60e-09,3;CL:0000081,4.20e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;6.21e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.78e-38!115;UBERON:0002390!7.03e-18!102;UBERON:0003061!7.03e-18!102;UBERON:0002193!1.30e-16!112;UBERON:0001049!1.38e-10!57;UBERON:0005068!1.38e-10!57;UBERON:0006241!1.38e-10!57;UBERON:0007135!1.38e-10!57;UBERON:0002371!8.69e-10!80;UBERON:0000178!5.09e-09!15;UBERON:0000179!5.09e-09!15;UBERON:0000463!5.09e-09!15;UBERON:0001474!2.37e-08!86;UBERON:0002405!2.84e-08!115;UBERON:0002616!2.85e-08!59;UBERON:0002780!3.00e-08!41;UBERON:0001890!3.00e-08!41;UBERON:0006240!3.00e-08!41;UBERON:0003080!6.70e-08!42;UBERON:0002308!1.20e-07!9;UBERON:0000125!1.20e-07!9;UBERON:0002020!9.29e-07!34;UBERON:0003528!9.29e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.14e-16;15!UBERON:0000179;6.14e-16;15!UBERON:0000463;6.14e-16;15!UBERON:0002390;1.37e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.03e-20,98;UBERON:0003061,8.03e-20,98;UBERON:0002193,9.64e-20,108;UBERON:0007023,6.19e-19,114;UBERON:0000178,5.99e-16,15;UBERON:0000179,5.99e-16,15;UBERON:0000463,5.99e-16,15;UBERON:0002405,1.86e-10,93;UBERON:0002371,1.97e-09,76;UBERON:0001474,2.37e-08,82;UBERON:0003081,3.04e-07,203;UBERON:0004765,3.77e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.57345710739562,0.383829398097213,0.154816123316076,0,0,0.369754010166788,0.0774672005803016,0.284338464974843,0,0,0.200544447470142,0,0,0,0,7.12451370019867,1.88937971844405,9.21819432513701,1.16214518452842,0.822335776043652,1.23882548358041,1.43846196161075,0.768482119587302,2.12834006899727,0.689491361473237,0,0,3.20011977222428,0.545812300115692,1.12361742222542,0.918251677112708,0.320929027076094,1.91801137739712,4.61791820261403,0.598390972864896,7.6720455095885,0.870627715885752,0.56738522469114,2.4912889959823,1.25624332628372,0,2.38907729175628,1.81619850790011,0,1.89877432464531,0,0.212604299965044,0,1.34794357375794,1.50176892841506,2.4108838004562,0,0.19891667719909,0.182664153764634,1.75996244461323,4.36910889009705,0,5.9742231159311,0.800791974072025,3.4485146397269,5.2883589822789,3.81621501814146,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0.95569624297229,0,0,0.752875595388864,0.127986611154418,4.99722906209383,10.4181990899367,1.64225599384209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,202.941842851537,286.957395469761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,343.04521696781,326.085990532387,658.920666363296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,4.74571241800957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19427136107939,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,161.875787345062,133.046874042773,256.910881415547,195.826519426303,239.001480663079,149.148861574325,103.686035949718,221.281924186101,0,0,0.245040215981032,0,0,0,0,0.199579371432817,3.4470966623826,0,0.649243880549111,2.52717460302113,0.684704037099577,2.6635582281414,0,0,0.802940375518498,1.81619736471943,8.51692475380653,0.687010689511529,2.15068535015921,5.36822658941798,3.33698283423817,3.12620952643264,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.422008249231538,0,0,0,1.19548792950642,0,0,0,0.246169610922139,0,0,0,0.511572370226872,0.887790650732402,71.8449277040819,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.774054819518572,0,0,0,0,0.923403102045565,0,0,0.448788222048861,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0,0.337005664903385,0,0,0,1.17398771359254,0,2.76209081994573,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0.173559738335131,0.391969589657511,0,1.39781334593624,0,0,0,0,3.006659511141,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.09524303113594,0,0,0,0,0,0,1.19807400299395,0.858452096273142,2.90122894674434,0.806201669840715,0,0,0,0,0,0,0,0,1.63444087333891,0,0,0,0,0,0,0.335434687599266,0.315222829196793,0.472091293214983,0,0,0,0.714695326373367,3.31045985182716,0,0,0,0,0,0,0,0,1.46552233678082,1.32506888912221,0.517131825446202,1.19009341568421,0,0,6.72760699176477,0.628817220398664,7.45630299624952,9.92332043623902,0,0,0.638341257770182,0,0,0,0,0,0,0,0.751145584238999,1.14681839138014,0.998361463831671,0.931446044120752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,7.575112808284,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,1.11743701340006,0.41023272848151,0,0.138314504928436,0,0,0,0.11796972334774,0.183428598521679,0.231051332300676,0,0,0,0.376051641746286,0,0,0,0,0,0.0675375846183947,0,1.2401207790071,0.126831620387814,0,0,0.992422356778588,0,0.766574565837572,0.535701835878287,0,0.606965604236632,0.682986574053893,1.68534503309014,0,0,0.203909198930495,0,0,0,1.49136876415977,0.157115589916002,0,0,0,0,0.78624198594322,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,2.97046400327086,0,0,11.6540058295018,4.70542582207113,0.0999411559249289,0.535661815816973,0,0,0.730336388246517,0,4.15684791139209,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0.829169439458779,0.517164979309476,1.91910583710883,0.23806443146374,0.258355639344024,0.620747142958579,0,0.318235791390825,0,0,0.684466602170562,1.81850543139386,4.08816570738255,0.665320713092027,0.0814032686109745,0,0,0,0,0,0,1.99727032255654,0.40254758718205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2,0.320568492303233 | ||
|short_description=p3@CXCR2 | |short_description=p3@CXCR2 | ||
}} | }} |
Latest revision as of 15:49, 24 September 2015
Short description: | p3@CXCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CXCR2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000454148, NM_001557, uc002vha.1, uc002vhb.1_5end |
EntrezGene: | CXCR2 |
HGNC: | 6027 |
UniProt: | C9JG19P25025Q53PC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.91e-19 | 72 |
myeloid cell | 1.30e-16 | 108 |
common myeloid progenitor | 1.30e-16 | 108 |
hematopoietic oligopotent progenitor cell | 3.33e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.33e-16 | 161 |
classical monocyte | 4.21e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.21e-16 | 42 |
hematopoietic stem cell | 4.45e-16 | 168 |
leukocyte | 1.84e-15 | 136 |
hematopoietic cell | 1.14e-14 | 177 |
monopoietic cell | 9.46e-14 | 59 |
monocyte | 9.46e-14 | 59 |
monoblast | 9.46e-14 | 59 |
promonocyte | 9.46e-14 | 59 |
defensive cell | 1.96e-13 | 48 |
phagocyte | 1.96e-13 | 48 |
macrophage dendritic cell progenitor | 4.10e-13 | 61 |
nongranular leukocyte | 1.25e-12 | 115 |
myeloid lineage restricted progenitor cell | 1.08e-11 | 66 |
granulocyte | 1.71e-11 | 8 |
granulocyte monocyte progenitor cell | 1.95e-11 | 67 |
hematopoietic lineage restricted progenitor cell | 8.89e-11 | 120 |
neutrophil | 4.60e-09 | 3 |
blood cell | 4.20e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.03e-20 | 98 |
blood island | 8.03e-20 | 98 |
hemolymphoid system | 9.64e-20 | 108 |
adult organism | 6.19e-19 | 114 |
blood | 5.99e-16 | 15 |
haemolymphatic fluid | 5.99e-16 | 15 |
organism substance | 5.99e-16 | 15 |
immune system | 1.86e-10 | 93 |
bone marrow | 1.97e-09 | 76 |
bone element | 2.37e-08 | 82 |
lateral plate mesoderm | 3.04e-07 | 203 |
skeletal element | 3.77e-07 | 90 |