FFCP PHASE1:Hg19::chr2:219290413..219290430,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:219290413..219290430,+ | |||
|coexpression_cluster_id=C579 | |||
|description=CAGE_peak_at_chr2:219290413..219290430,+ | |description=CAGE_peak_at_chr2:219290413..219290430,+ | ||
|id=chr2:219290413..219290430,+ | |id=chr2:219290413..219290430,+ | ||
|ontology_enrichment_celltype=CL:0002178!7.18e-10!3;CL:0000181!1.74e-09!12;CL:0000417!1.74e-09!12;CL:0000668!1.74e-09!12;CL:0000414!1.74e-09!12;CL:0000412!1.74e-09!12;CL:0000182!1.74e-09!12;CL:0000223!5.19e-08!59;CL:0002563!7.36e-08!4 | |ontology_enrichment_celltype=CL:0002178!7.18e-10!3;CL:0000181!1.74e-09!12;CL:0000417!1.74e-09!12;CL:0000668!1.74e-09!12;CL:0000414!1.74e-09!12;CL:0000412!1.74e-09!12;CL:0000182!1.74e-09!12;CL:0000223!5.19e-08!59;CL:0002563!7.36e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.01e-19;12!CL:0002563;3.80e-15;4!CL:0002535;1.29e-08;2!CL:0002253;2.48e-08;2!CL:0002251;6.10e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.68e-19,12;CL:0002563,3.94e-15,4;CL:0000223,5.83e-15,58;CL:0002535,1.39e-08,2;CL:0002253,2.48e-08,2;CL:0002251,6.43e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.58e-12;11!CL:0000223;2.04e-10;58!UBERON:0009497;2.16e-10;13!UBERON:0003104;1.70e-07;31 | |||
|ontology_enrichment_disease=DOID:3493!3.09e-14!2;DOID:3119!7.60e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.88e-21!35;UBERON:0000160!2.21e-18!27;UBERON:0000059!3.55e-15!11;UBERON:0001155!3.27e-12!9;UBERON:0004921!9.41e-12!129;UBERON:0004185!9.41e-12!129;UBERON:0001007!1.56e-10!155;UBERON:0001555!1.56e-10!155;UBERON:0007026!1.56e-10!155;UBERON:0004119!2.27e-09!169;UBERON:0000925!2.27e-09!169;UBERON:0006595!2.27e-09!169;UBERON:0009497!2.68e-09!25;UBERON:0000015!2.68e-09!25;UBERON:0002423!2.68e-09!25;UBERON:0006235!2.68e-09!25;UBERON:0004161!2.68e-09!25;UBERON:0002107!7.56e-09!19;UBERON:0006925!7.56e-09!19;UBERON:0008836!7.56e-09!19;UBERON:0003929!7.91e-09!54;UBERON:0001242!7.36e-08!4;UBERON:0001262!7.36e-08!4;UBERON:0004786!7.36e-08!4;UBERON:0004808!7.36e-08!4;UBERON:0001277!7.36e-08!4;UBERON:0001052!1.03e-07!4;UBERON:0008835!1.31e-07!22;UBERON:0003894!1.31e-07!22;UBERON:0009854!2.89e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.33e-29;22!UBERON:0000160;4.58e-28;17!UBERON:0002108;2.67e-26;4!UBERON:0004921;5.02e-17;33!UBERON:0001242;3.80e-15;4!UBERON:0001262;3.80e-15;4!UBERON:0004786;3.80e-15;4!UBERON:0004808;3.80e-15;4!UBERON:0001277;3.80e-15;4!UBERON:0002107;2.80e-12;19!UBERON:0006925;2.80e-12;19!UBERON:0001007;2.63e-10;81!UBERON:0002423;2.14e-09;25!UBERON:0000485;4.66e-09;7!UBERON:0003929;4.66e-09;7!UBERON:0006955;1.29e-08;2!UBERON:0004801;1.29e-08;2!UBERON:0003350;4.91e-08;8!UBERON:0001555;1.63e-07;54!UBERON:0002365;2.97e-07;31!UBERON:0002330;2.97e-07;31!UBERON:0001155;3.67e-07;9!UBERON:0002368;5.88e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.37e-28,17;UBERON:0002108,1.81e-26,4;UBERON:0005409,3.93e-26,25;UBERON:0004921,5.95e-16,118;UBERON:0001242,3.94e-15,4;UBERON:0001262,3.94e-15,4;UBERON:0004786,3.94e-15,4;UBERON:0004808,3.94e-15,4;UBERON:0001277,3.94e-15,4;UBERON:0001007,9.03e-13,145;UBERON:0001555,9.03e-13,145;UBERON:0007026,9.03e-13,145;UBERON:0003929,1.97e-12,54;UBERON:0002107,2.60e-12,19;UBERON:0006925,2.60e-12,19;UBERON:0008836,2.60e-12,19;UBERON:0004119,1.85e-11,160;UBERON:0000925,1.85e-11,160;UBERON:0006595,1.85e-11,160;UBERON:0008835,1.14e-10,22;UBERON:0003894,1.14e-10,22;UBERON:0009854,3.23e-10,23;UBERON:0007499,2.03e-09,25;UBERON:0009497,2.03e-09,25;UBERON:0000015,2.03e-09,25;UBERON:0002423,2.03e-09,25;UBERON:0006235,2.03e-09,25;UBERON:0004161,2.03e-09,25;UBERON:0011216,3.08e-09,223;UBERON:0009856,4.57e-09,26;UBERON:0006955,1.39e-08,2;UBERON:0004801,1.39e-08,2;UBERON:0003350,5.00e-08,8;UBERON:0005911,5.25e-08,82;UBERON:0002365,1.22e-07,31;UBERON:0002330,1.22e-07,31;UBERON:0000485,3.14e-07,9;UBERON:0001155,4.03e-07,9;UBERON:0002368,8.66e-07,35 | |||
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|short_description=p@chr2:219290413..219290430,+ | |short_description=p@chr2:219290413..219290430,+ | ||
}} | }} |
Latest revision as of 06:40, 29 July 2015
Short description: | p@chr2:219290413..219290430, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:219290413..219290430, + |
Coexpression cluster: | C579_small_argyrophil_colon_duodenum_signet_temporal_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.68e-19 | 12 |
intestinal epithelial cell | 3.94e-15 | 4 |
endodermal cell | 5.83e-15 | 58 |
epithelial cell of cervix | 1.39e-08 | 2 |
epithelial cell of large intestine | 2.48e-08 | 2 |
epithelial cell of alimentary canal | 6.43e-07 | 20 |