FFCP PHASE1:Hg19::chr2:228337079..228337092,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3267 | |EntrezGene=3267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5175 | |HGNC=5175 | ||
|TSSclassifier=strong | |||
|UniProt=B8ZZY2 | |UniProt=B8ZZY2 | ||
|association_with_transcript=0bp_to_ENST00000373671,ENST00000409171,ENST00000409315_5end | |association_with_transcript=0bp_to_ENST00000373671,ENST00000409171,ENST00000409315_5end | ||
|cluster_id=chr2:228337079..228337092,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_AGFG1_5end | |description=CAGE_peak_4_at_AGFG1_5end | ||
|id=chr2:228337079..228337092,+ | |id=chr2:228337079..228337092,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.60e-18!45;CL:0002057!3.09e-17!42;CL:0000766!2.42e-10!76;CL:0002009!5.82e-10!65;CL:0002194!6.94e-10!63;CL:0000576!6.94e-10!63;CL:0000040!6.94e-10!63;CL:0000559!6.94e-10!63;CL:0000839!1.51e-09!70;CL:0000557!7.95e-09!71 | |ontology_enrichment_celltype=CL:0000860!4.60e-18!45;CL:0002057!3.09e-17!42;CL:0000766!2.42e-10!76;CL:0002009!5.82e-10!65;CL:0002194!6.94e-10!63;CL:0000576!6.94e-10!63;CL:0000040!6.94e-10!63;CL:0000559!6.94e-10!63;CL:0000839!1.51e-09!70;CL:0000557!7.95e-09!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.87e-27;33!CL:0002057;3.87e-27;33!CL:0000473;3.26e-21;39!CL:0000234;3.26e-21;39!CL:0000766;1.31e-18;69!CL:0000576;2.03e-17;48!CL:0002393;2.82e-09;6!CL:0002397;2.82e-09;6!CL:0000775;8.71e-09;3!CL:0000081;1.41e-08;11!CL:0000763;3.54e-07;100!CL:0000094;4.60e-07;8!CL:0000511;5.28e-07;1!CL:0002625;5.28e-07;1!CL:0000216;5.28e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.83e-36,42;CL:0002057,2.83e-36,42;CL:0000473,2.77e-31,48;CL:0000234,2.77e-31,48;CL:0000766,2.05e-27,72;CL:0002194,2.68e-24,59;CL:0000576,2.68e-24,59;CL:0000040,2.68e-24,59;CL:0000559,2.68e-24,59;CL:0002009,2.14e-23,61;CL:0000839,2.23e-21,66;CL:0000557,5.19e-21,67;CL:0000763,6.98e-19,108;CL:0000049,6.98e-19,108;CL:0000738,4.37e-14,136;CL:0002087,2.77e-12,115;CL:0000988,3.03e-12,177;CL:0000037,7.87e-12,168;CL:0002032,3.00e-11,161;CL:0000837,3.00e-11,161;CL:0002031,3.11e-10,120;CL:0000775,8.74e-09,3;CL:0000081,1.91e-08,11;CL:0000511,3.82e-07,1;CL:0002625,3.82e-07,1;CL:0000216,3.82e-07,1;CL:0000094,5.62e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.82e-32;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.70e-08!80;UBERON:0001474!1.16e-07!86;UBERON:0004765!1.27e-07!101;UBERON:0001434!1.27e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.65e-07;8!UBERON:0001136;5.28e-07;1!UBERON:0001343;5.28e-07;1!UBERON:0007195;5.28e-07;1!UBERON:0004910;5.28e-07;1!UBERON:0004813;5.28e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.77e-23,76;UBERON:0002390,3.71e-21,98;UBERON:0003061,3.71e-21,98;UBERON:0001474,4.36e-21,82;UBERON:0004765,7.11e-19,90;UBERON:0002193,8.34e-19,108;UBERON:0002405,3.84e-18,93;UBERON:0001434,1.33e-16,100;UBERON:0002204,5.70e-12,167;UBERON:0003081,3.24e-11,203;UBERON:0000473,2.36e-07,8;UBERON:0001136,3.82e-07,1;UBERON:0001343,3.82e-07,1;UBERON:0004910,3.82e-07,1;UBERON:0005154,3.82e-07,1;UBERON:0005295,3.82e-07,1;UBERON:0004813,3.82e-07,1;UBERON:0005297,3.82e-07,1;UBERON:0005294,3.82e-07,1;UBERON:0010141,3.82e-07,1;UBERON:0005891,3.82e-07,1;UBERON:0000926,4.84e-07,315;UBERON:0004120,4.84e-07,315;UBERON:0006603,4.84e-07,315;UBERON:0007195,8.18e-07,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0.534893840235659,0.246301768349837,0.236132343941038,0.393364276848904,0.767658796194425,1.08371286321253,0,0,0,0.0774672005803016,0,0.293600439334847,1.66198622559563,2.20598892217156,1.51907609501096,0,0,0,0.726991193897824,1.13362783106643,0.242584061187816,2.78914844286822,0.411167888021826,0,2.01384674625505,1.0246428261164,0.709446689665756,3.7922024881028,1.93645405075148,1.35426486594342,1.31769637679823,0.818718450173537,0.224723484445085,0.918251677112708,0.962787081228281,0,2.96866170168044,1.19678194572979,0,0.870627715885752,1.70215567407342,0,1.25624332628372,0.521482918420201,0.434377689410233,0.605399502633369,1.84138817993782,1.89877432464531,0,0.425208599930087,0,0.44931452458598,0.300353785683013,0.48217676009124,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.511450247374121,0,1.00267582127178,0.579386075843295,0.795285947051099,0.486634870302636,0.472674085820339,0.221729397462564,0.087834785693126,2.75056058545197,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67355336034844,0.653847612453835,0,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0.226864366320042,0,0.427114777637135,0.211931901159562,0,0.515262646192195,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0.653638332277218,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0.100528972411631,0,0,0,0,0.115930404975077,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0.179117045405697,0,0,0,0.088048434013226,0,0,0.25248486685276,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0.215627574859517,0,0,0,0.773288812777695,0,0,1.49801404789436,0,2.07207756718018,0.24538298343828,0,0.271265023699736,0.415941723061614,0.178428988797162,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,1.07857100409308,0.213455115606889,0.303127571446259,0,0,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.410635780069046,0.519254429183621,0.464841513839837,0,0,0,0.459257792658427,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0.308097234229289,0,0.137836572484531,0,0,0.170453254832202,0.178064071293475,0.330569830721956,0,0.382838137483752,0.4046311234222,0.464845549297286,0.31481234683064,0,0.924100740528266,0.532306030317022,0,0,0.572499546967965,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0.823611089208164,0.117812402345686,0,1.58510321173008,0,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,1.10273068709225,0,0.438450885253763,0,0,0.202910376962704,0,0,0.143411352204052,0,0.35667105148125,0,0.422215270595328,0.987884678879706,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0,1.23087398947712,0,0,0,0.37428108081644,0.439524537815682,0,0,0.284136146806413,0,0.296964680832639,0,0,0,0.111308705022906,0.329607748453519,0,0,0,0,0.20453736500431,0,0.311039587661807,0,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0.524759999977174,1.44999915086959,0.227586896570999,0,0.236387681767936,0,0,0.173624994933292,0,0.120596438625408,1.52581736317083,0.221158519862449,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0.113942055847001,0.23056390438806,0.538545866458633,0.108647371922008,0,0,0,0,0.156980256395025,0.332423363800313,0,0,0,0,0,0,0,0.141353071433941,0,0,0.619202951523374,0.611030144933625,1.18608451472249,0.741383633679017,0.417687798021821,0.067401132980677,0,0.702793337176017,0,0.19566461893209,0,0,0,0.30607276163049,0.379119477770928,0,0,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0.520679215005393,0.293977192243133,0.174118413160805,0,0.171986032471617,0.290268993867255,0.219267951258557,0.246346371159628,0.193978032976839,0.441280633457501,0,0,0,0.253243183823515,0,0,0,0,0.144090417154106,0,0,0,0,0.707082103850386,0.135904206073614,0.209205692624666,0,0.288950589901519,0.600420288709789,0.2738107577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| ||
|short_description=p4@AGFG1 | |short_description=p4@AGFG1 | ||
}} | }} |
Latest revision as of 04:02, 25 September 2015
Short description: | p4@AGFG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AGFG1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000373671, ENST00000409171, ENST00000409315_5end |
EntrezGene: | AGFG1 |
HGNC: | 5175 |
UniProt: | B8ZZY2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.83e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.83e-36 | 42 |
defensive cell | 2.77e-31 | 48 |
phagocyte | 2.77e-31 | 48 |
myeloid leukocyte | 2.05e-27 | 72 |
monopoietic cell | 2.68e-24 | 59 |
monocyte | 2.68e-24 | 59 |
monoblast | 2.68e-24 | 59 |
promonocyte | 2.68e-24 | 59 |
macrophage dendritic cell progenitor | 2.14e-23 | 61 |
myeloid lineage restricted progenitor cell | 2.23e-21 | 66 |
granulocyte monocyte progenitor cell | 5.19e-21 | 67 |
myeloid cell | 6.98e-19 | 108 |
common myeloid progenitor | 6.98e-19 | 108 |
leukocyte | 4.37e-14 | 136 |
nongranular leukocyte | 2.77e-12 | 115 |
hematopoietic cell | 3.03e-12 | 177 |
hematopoietic stem cell | 7.87e-12 | 168 |
hematopoietic oligopotent progenitor cell | 3.00e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.00e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 3.11e-10 | 120 |
neutrophil | 8.74e-09 | 3 |
blood cell | 1.91e-08 | 11 |
androgen binding protein secreting cell | 3.82e-07 | 1 |
seminiferous tubule epithelial cell | 3.82e-07 | 1 |
Sertoli cell | 3.82e-07 | 1 |
granulocyte | 5.62e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.77e-23 | 76 |
hematopoietic system | 3.71e-21 | 98 |
blood island | 3.71e-21 | 98 |
bone element | 4.36e-21 | 82 |
skeletal element | 7.11e-19 | 90 |
hemolymphoid system | 8.34e-19 | 108 |
immune system | 3.84e-18 | 93 |
skeletal system | 1.33e-16 | 100 |
musculoskeletal system | 5.70e-12 | 167 |
lateral plate mesoderm | 3.24e-11 | 203 |
testis | 2.36e-07 | 8 |
mesothelium | 3.82e-07 | 1 |
seminiferous tubule of testis | 3.82e-07 | 1 |
epithelium of male gonad | 3.82e-07 | 1 |
epithelial cord | 3.82e-07 | 1 |
sex cord | 3.82e-07 | 1 |
seminiferous tubule epithelium | 3.82e-07 | 1 |
testis sex cord | 3.82e-07 | 1 |
genital ridge | 3.82e-07 | 1 |
primitive sex cord of indifferent gonad | 3.82e-07 | 1 |
coelomic epithelium | 3.82e-07 | 1 |
mesoderm | 4.84e-07 | 315 |
mesoderm-derived structure | 4.84e-07 | 315 |
presumptive mesoderm | 4.84e-07 | 315 |
stroma of bone marrow | 8.18e-07 | 1 |