FFCP PHASE1:Hg19::chr19:10983098..10983110,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:10983098..10983110,+ | |||
|description=CAGE_peak_at_chr19:10983098..10983110,+ | |description=CAGE_peak_at_chr19:10983098..10983110,+ | ||
|id=chr19:10983098..10983110,+ | |id=chr19:10983098..10983110,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.51e-13!180;CL:0000680!1.22e-10!57;CL:0000056!1.22e-10!57;CL:0000355!1.22e-10!57;CL:0000187!1.83e-10!54;CL:0000183!5.26e-10!59;CL:0000393!1.13e-09!60;CL:0000211!1.13e-09!60;CL:0000192!9.22e-08!42;CL:0000514!9.22e-08!42;CL:0002551!5.17e-07!6 | |ontology_enrichment_celltype=CL:0000055!7.51e-13!180;CL:0000680!1.22e-10!57;CL:0000056!1.22e-10!57;CL:0000355!1.22e-10!57;CL:0000187!1.83e-10!54;CL:0000183!5.26e-10!59;CL:0000393!1.13e-09!60;CL:0000211!1.13e-09!60;CL:0000192!9.22e-08!42;CL:0000514!9.22e-08!42;CL:0002551!5.17e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002367;1.42e-36;2!CL:0002600;1.72e-10;2!CL:0002592;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002367,9.84e-37,2;CL:0002600,1.72e-10,2;CL:0002592,2.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.30e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;2.72e-10;2!DOID:962;2.72e-10;2!DOID:1192;2.79e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,2.72e-10,2;DOID:962,2.72e-10,2;DOID:1192,2.79e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.94e-12!70;UBERON:0000914!8.17e-12!83;UBERON:0002329!8.17e-12!83;UBERON:0003077!8.17e-12!83;UBERON:0003059!8.17e-12!83;UBERON:0007282!8.17e-12!83;UBERON:0009618!8.17e-12!83;UBERON:0007285!8.17e-12!83;UBERON:0000486!3.87e-11!82;UBERON:0001134!1.66e-09!61;UBERON:0002036!1.66e-09!61;UBERON:0003082!1.66e-09!61;UBERON:0002385!5.36e-09!63;UBERON:0001015!5.36e-09!63;UBERON:0000383!5.36e-09!63 | |ontology_enrichment_uberon=UBERON:0004290!2.94e-12!70;UBERON:0000914!8.17e-12!83;UBERON:0002329!8.17e-12!83;UBERON:0003077!8.17e-12!83;UBERON:0003059!8.17e-12!83;UBERON:0007282!8.17e-12!83;UBERON:0009618!8.17e-12!83;UBERON:0007285!8.17e-12!83;UBERON:0000486!3.87e-11!82;UBERON:0001134!1.66e-09!61;UBERON:0002036!1.66e-09!61;UBERON:0003082!1.66e-09!61;UBERON:0002385!5.36e-09!63;UBERON:0001015!5.36e-09!63;UBERON:0000383!5.36e-09!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0005969;1.42e-36;2!UBERON:0003956;1.42e-36;2!UBERON:0002203;6.50e-13;6!UBERON:0001768;6.50e-13;6!UBERON:0002200;6.50e-13;6!UBERON:0003714;2.72e-10;2!UBERON:0002331;2.82e-08;10!UBERON:0006876;1.84e-07;11!UBERON:0000478;1.97e-07;24!UBERON:0003498;2.79e-07;3!UBERON:0005985;2.79e-07;3!UBERON:0001621;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,9.84e-37,2;UBERON:0003956,9.84e-37,2;UBERON:0002203,5.76e-13,6;UBERON:0001768,5.76e-13,6;UBERON:0002200,5.76e-13,6;UBERON:0003714,2.72e-10,2;UBERON:0002331,2.82e-08,10;UBERON:0000358,2.82e-08,10;UBERON:0000307,2.82e-08,10;UBERON:0000091,2.82e-08,10;UBERON:0000087,2.82e-08,10;UBERON:0007010,2.82e-08,10;UBERON:0007806,2.82e-08,10;UBERON:0008780,2.82e-08,10;UBERON:0005728,2.82e-08,10;UBERON:0006876,1.73e-07,11;UBERON:0000478,2.06e-07,24;UBERON:0001621,2.63e-07,3 | |||
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| ||
|short_description=p@chr19:10983098..10983110,+ | |short_description=p@chr19:10983098..10983110,+ | ||
}} | }} |
Latest revision as of 03:17, 26 July 2015
Short description: | p@chr19:10983098..10983110, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:10983098..10983110, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trabecular meshwork cell | 9.84e-37 | 2 |
smooth muscle cell of trachea | 1.72e-10 | 2 |
smooth muscle cell of the coronary artery | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 9.84e-37 | 2 |
aqueous drainage system | 9.84e-37 | 2 |
vasculature of eye | 5.76e-13 | 6 |
uvea | 5.76e-13 | 6 |
vasculature of head | 5.76e-13 | 6 |
neural tissue | 2.72e-10 | 2 |
umbilical cord | 2.82e-08 | 10 |
blastocyst | 2.82e-08 | 10 |
blastula | 2.82e-08 | 10 |
bilaminar disc | 2.82e-08 | 10 |
inner cell mass | 2.82e-08 | 10 |
cleaving embryo | 2.82e-08 | 10 |
connecting stalk | 2.82e-08 | 10 |
inner cell mass derived epiblast | 2.82e-08 | 10 |
extraembryonic mesoderm | 2.82e-08 | 10 |
vasculature of organ | 1.73e-07 | 11 |
extraembryonic structure | 2.06e-07 | 24 |
coronary artery | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 2.72e-10 | 2 |
neurofibroma | 2.72e-10 | 2 |
peripheral nervous system neoplasm | 2.79e-07 | 3 |