FFCP PHASE1:Hg19::chr19:12941129..12941138,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83546 | |EntrezGene=83546 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30310 | |HGNC=30310 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSG5 | |UniProt=Q9BSG5 | ||
|association_with_transcript=68bp_to_ENST00000458671,NM_001080997,uc002mvi.2_5end | |association_with_transcript=68bp_to_ENST00000458671,NM_001080997,uc002mvi.2_5end | ||
|cluster_id=chr19:12941129..12941138,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_11_at_RTBDN_5end | |description=CAGE_peak_11_at_RTBDN_5end | ||
|id=chr19:12941129..12941138,- | |id=chr19:12941129..12941138,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.27e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!5.22e-79!2;UBERON:0002757!5.22e-79!2;UBERON:0010134!5.22e-79!2;UBERON:0002784!5.22e-79!2;UBERON:0005408!5.22e-79!2;UBERON:0001899!5.22e-79!2;UBERON:0003296!3.31e-40!4;UBERON:0010133!3.31e-40!4;UBERON:0001894!1.61e-23!7;UBERON:0006222!1.61e-23!7;UBERON:0003127!6.96e-21!2;UBERON:0000966!2.74e-09!5;UBERON:0005388!2.74e-09!5;UBERON:0001802!2.74e-09!5;UBERON:0000970!5.26e-09!20;UBERON:0002104!1.27e-08!21;UBERON:0000020!5.87e-08!23;UBERON:0001032!1.15e-07!24;UBERON:0004456!1.15e-07!24;UBERON:0003126!6.39e-07!7;UBERON:0001005!6.39e-07!7 | |ontology_enrichment_uberon=UBERON:0001905!5.22e-79!2;UBERON:0002757!5.22e-79!2;UBERON:0010134!5.22e-79!2;UBERON:0002784!5.22e-79!2;UBERON:0005408!5.22e-79!2;UBERON:0001899!5.22e-79!2;UBERON:0003296!3.31e-40!4;UBERON:0010133!3.31e-40!4;UBERON:0001894!1.61e-23!7;UBERON:0006222!1.61e-23!7;UBERON:0003127!6.96e-21!2;UBERON:0000966!2.74e-09!5;UBERON:0005388!2.74e-09!5;UBERON:0001802!2.74e-09!5;UBERON:0000970!5.26e-09!20;UBERON:0002104!1.27e-08!21;UBERON:0000020!5.87e-08!23;UBERON:0001032!1.15e-07!24;UBERON:0004456!1.15e-07!24;UBERON:0003126!6.39e-07!7;UBERON:0001005!6.39e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.05e-34;2!UBERON:0002757;7.05e-34;2!UBERON:0010134;7.05e-34;2!UBERON:0005408;7.05e-34;2!UBERON:0001899;7.05e-34;2!UBERON:0003296;1.03e-17;4!UBERON:0010133;1.03e-17;4!UBERON:0002784;1.03e-17;4!UBERON:0000966;1.60e-14;5!UBERON:0005388;1.60e-14;5!UBERON:0001802;1.60e-14;5!UBERON:0000970;2.41e-14;20!UBERON:0002104;1.02e-13;21!UBERON:0000020;1.25e-12;23!UBERON:0001032;3.75e-12;24!UBERON:0004456;3.75e-12;24!UBERON:0001894;9.89e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.05e-34,2;UBERON:0002757,7.05e-34,2;UBERON:0010134,7.05e-34,2;UBERON:0005408,7.05e-34,2;UBERON:0001899,7.05e-34,2;UBERON:0003296,1.03e-17,4;UBERON:0010133,1.03e-17,4;UBERON:0002784,1.03e-17,4;UBERON:0000970,1.02e-13,21;UBERON:0002104,1.02e-13,21;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0000020,3.75e-12,24;UBERON:0001032,3.75e-12,24;UBERON:0004456,3.75e-12,24;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7 | |||
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|short_description=p11@RTBDN | |short_description=p11@RTBDN | ||
}} | }} |
Latest revision as of 21:24, 15 September 2015
Short description: | p11@RTBDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RTBDN_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 68bp_to_ENST00000458671, NM_001080997, uc002mvi.2_5end |
EntrezGene: | RTBDN |
HGNC: | 30310 |
UniProt: | Q9BSG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 7.05e-34 | 2 |
regional part of epithalamus | 7.05e-34 | 2 |
secretory circumventricular organ | 7.05e-34 | 2 |
circumventricular organ | 7.05e-34 | 2 |
epithalamus | 7.05e-34 | 2 |
gland of diencephalon | 1.03e-17 | 4 |
neuroendocrine gland | 1.03e-17 | 4 |
regional part of diencephalon | 1.03e-17 | 4 |
eye | 1.02e-13 | 21 |
visual system | 1.02e-13 | 21 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
sense organ | 3.75e-12 | 24 |
sensory system | 3.75e-12 | 24 |
entire sense organ system | 3.75e-12 | 24 |
diencephalon | 9.89e-11 | 7 |
future diencephalon | 9.89e-11 | 7 |