FFCP PHASE1:Hg19::chr19:29097532..29097550,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:29097532..29097550,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_at_chr19:29097532..29097550,+ | |description=CAGE_peak_at_chr19:29097532..29097550,+ | ||
|id=chr19:29097532..29097550,+ | |id=chr19:29097532..29097550,+ | ||
|ontology_enrichment_celltype=CL:0000785!1.94e-15!2;CL:0000955!1.94e-15!2;CL:0000818!1.94e-15!2;CL:0000954!1.94e-15!2;CL:0000816!1.94e-15!2;CL:0002032!2.87e-15!165;CL:0000837!2.87e-15!165;CL:0000037!1.73e-14!172;CL:0000566!1.73e-14!172;CL:0000945!1.03e-13!24;CL:0000826!1.03e-13!24;CL:0000988!1.76e-13!182;CL:0000817!1.34e-10!3;CL:0000763!5.71e-10!112;CL:0000049!5.71e-10!112;CL:0000819!5.59e-09!1;CL:0000946!3.53e-08!1;CL:0000786!3.53e-08!1;CL:0000980!3.53e-08!1 | |ontology_enrichment_celltype=CL:0000785!1.94e-15!2;CL:0000955!1.94e-15!2;CL:0000818!1.94e-15!2;CL:0000954!1.94e-15!2;CL:0000816!1.94e-15!2;CL:0002032!2.87e-15!165;CL:0000837!2.87e-15!165;CL:0000037!1.73e-14!172;CL:0000566!1.73e-14!172;CL:0000945!1.03e-13!24;CL:0000826!1.03e-13!24;CL:0000988!1.76e-13!182;CL:0000817!1.34e-10!3;CL:0000763!5.71e-10!112;CL:0000049!5.71e-10!112;CL:0000819!5.59e-09!1;CL:0000946!3.53e-08!1;CL:0000786!3.53e-08!1;CL:0000980!3.53e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000785;2.66e-18;1!CL:0000819;2.66e-18;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.66e-18,1;CL:0000763,1.27e-11,108;CL:0000049,1.27e-11,108;CL:0002032,1.60e-11,161;CL:0000837,1.60e-11,161;CL:0000037,5.26e-11,168;CL:0000988,2.11e-10,177;CL:0000785,7.98e-10,2;CL:0000955,7.98e-10,2;CL:0000818,7.98e-10,2;CL:0000954,7.98e-10,2;CL:0000816,7.98e-10,2;CL:0000817,5.80e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;7.98e-10;2 | |||
|ontology_enrichment_disease=DOID:8692!2.36e-43!31;DOID:2531!5.53e-38!51;DOID:0060083!5.53e-38!51;DOID:1240!6.31e-34!39;DOID:1036!8.06e-33!8;DOID:0050686!1.27e-13!137;DOID:162!5.31e-12!235;DOID:14566!1.16e-11!239;DOID:0060073!5.59e-09!1;DOID:8675!5.59e-09!1;DOID:2355!1.18e-08!1;DOID:0060058!4.02e-07!10 | |ontology_enrichment_disease=DOID:8692!2.36e-43!31;DOID:2531!5.53e-38!51;DOID:0060083!5.53e-38!51;DOID:1240!6.31e-34!39;DOID:1036!8.06e-33!8;DOID:0050686!1.27e-13!137;DOID:162!5.31e-12!235;DOID:14566!1.16e-11!239;DOID:0060073!5.59e-09!1;DOID:8675!5.59e-09!1;DOID:2355!1.18e-08!1;DOID:0060058!4.02e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.18e-51;8!DOID:8692;3.23e-39;31!DOID:1240;2.89e-30;39!DOID:2531;7.76e-23;51!DOID:0060083;7.76e-23;51!DOID:0060073;2.66e-18;1!DOID:8675;2.66e-18;1!DOID:2355;1.12e-17;1!DOID:74;1.64e-09;2!DOID:0060058;1.31e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.18e-51,8;DOID:8692,2.15e-42,31;DOID:2531,2.61e-38,51;DOID:0060083,2.61e-38,51;DOID:1240,1.32e-33,39;DOID:0060073,2.66e-18,1;DOID:8675,2.66e-18,1;DOID:2355,1.44e-17,1;DOID:0050686,1.11e-13,137;DOID:74,1.86e-09,2;DOID:162,3.37e-09,235;DOID:14566,5.49e-09,239;DOID:0060058,1.37e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.74e-07!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.410502947249729,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,2.56940920165919,0,0,0,1.53620382154229,0.671028323677248,2.33588798396672,0.19538809540204,0.835218521685727,0,1.89318974933188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73750887296079,4.11731322067253,5.37029078322697,1.13852239634511,1.90723894776454,0,0,0,0,0,0,0,0,0,0,0,0,0,67.8731815882278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,1.18542664892098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,1.29556554731173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.410502947249729,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,2.56940920165919,0,0,0,1.53620382154229,0.671028323677248,2.33588798396672,0.19538809540204,0.835218521685727,0,1.89318974933188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73750887296079,4.11731322067253,5.37029078322697,1.13852239634511,1.90723894776454,0,0,0,0,0,0,0,0,0,0,0,0,0,67.8731815882278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,1.18542664892098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,1.29556554731173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:29097532..29097550,+ | |short_description=p@chr19:29097532..29097550,+ | ||
}} | }} |
Latest revision as of 06:01, 26 July 2015
Short description: | p@chr19:29097532..29097550, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:29097532..29097550, + |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.66e-18 | 1 |
myeloid cell | 1.27e-11 | 108 |
common myeloid progenitor | 1.27e-11 | 108 |
hematopoietic oligopotent progenitor cell | 1.60e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-11 | 161 |
hematopoietic stem cell | 5.26e-11 | 168 |
hematopoietic cell | 2.11e-10 | 177 |
mature B cell | 7.98e-10 | 2 |
pre-B-II cell | 7.98e-10 | 2 |
transitional stage B cell | 7.98e-10 | 2 |
small pre-B-II cell | 7.98e-10 | 2 |
immature B cell | 7.98e-10 | 2 |
precursor B cell | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.18e-51 | 8 |
myeloid leukemia | 2.15e-42 | 31 |
hematologic cancer | 2.61e-38 | 51 |
immune system cancer | 2.61e-38 | 51 |
leukemia | 1.32e-33 | 39 |
lymphatic system cancer | 2.66e-18 | 1 |
lymphosarcoma | 2.66e-18 | 1 |
anemia | 1.44e-17 | 1 |
organ system cancer | 1.11e-13 | 137 |
hematopoietic system disease | 1.86e-09 | 2 |
cancer | 3.37e-09 | 235 |
disease of cellular proliferation | 5.49e-09 | 239 |
lymphoma | 1.37e-07 | 10 |