FFCP PHASE1:Hg19::chr19:4164515..4164523,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:4164515..4164523,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr19:4164515..4164523,+ | |description=CAGE_peak_at_chr19:4164515..4164523,+ | ||
|id=chr19:4164515..4164523,+ | |id=chr19:4164515..4164523,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.50e-20!12;CL:0000417!5.50e-20!12;CL:0000668!5.50e-20!12;CL:0000414!5.50e-20!12;CL:0000412!5.50e-20!12;CL:0000182!5.50e-20!12;CL:0000223!3.22e-07!59 | |ontology_enrichment_celltype=CL:0000181!5.50e-20!12;CL:0000417!5.50e-20!12;CL:0000668!5.50e-20!12;CL:0000414!5.50e-20!12;CL:0000412!5.50e-20!12;CL:0000182!5.50e-20!12;CL:0000223!3.22e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.26e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.26e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.29e-10;11!UBERON:0009497;1.31e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.22e-24!19;UBERON:0006925!3.22e-24!19;UBERON:0008836!3.22e-24!19;UBERON:0008835!7.90e-21!22;UBERON:0003894!7.90e-21!22;UBERON:0009854!6.78e-20!23;UBERON:0007499!2.99e-18!25;UBERON:0009497!2.99e-18!25;UBERON:0000015!2.99e-18!25;UBERON:0002423!2.99e-18!25;UBERON:0006235!2.99e-18!25;UBERON:0004161!2.99e-18!25;UBERON:0005057!1.60e-17!26;UBERON:0009856!1.60e-17!26;UBERON:0002365!1.38e-14!31;UBERON:0002330!1.38e-14!31;UBERON:0002368!7.71e-13!35;UBERON:0000949!1.05e-12!45;UBERON:0000160!6.69e-12!27;UBERON:0002108!1.65e-10!14;UBERON:0003929!1.95e-10!54;UBERON:0004921!2.09e-10!129;UBERON:0004185!2.09e-10!129;UBERON:0005172!3.36e-10!55;UBERON:0005173!3.36e-10!55;UBERON:0005409!3.69e-09!35;UBERON:0002417!4.24e-09!61;UBERON:0000916!4.24e-09!61;UBERON:0001007!2.56e-08!155;UBERON:0001555!2.56e-08!155;UBERON:0007026!2.56e-08!155;UBERON:0004119!1.86e-07!169;UBERON:0000925!1.86e-07!169;UBERON:0006595!1.86e-07!169;UBERON:0002530!2.56e-07!59 | |ontology_enrichment_uberon=UBERON:0002107!3.22e-24!19;UBERON:0006925!3.22e-24!19;UBERON:0008836!3.22e-24!19;UBERON:0008835!7.90e-21!22;UBERON:0003894!7.90e-21!22;UBERON:0009854!6.78e-20!23;UBERON:0007499!2.99e-18!25;UBERON:0009497!2.99e-18!25;UBERON:0000015!2.99e-18!25;UBERON:0002423!2.99e-18!25;UBERON:0006235!2.99e-18!25;UBERON:0004161!2.99e-18!25;UBERON:0005057!1.60e-17!26;UBERON:0009856!1.60e-17!26;UBERON:0002365!1.38e-14!31;UBERON:0002330!1.38e-14!31;UBERON:0002368!7.71e-13!35;UBERON:0000949!1.05e-12!45;UBERON:0000160!6.69e-12!27;UBERON:0002108!1.65e-10!14;UBERON:0003929!1.95e-10!54;UBERON:0004921!2.09e-10!129;UBERON:0004185!2.09e-10!129;UBERON:0005172!3.36e-10!55;UBERON:0005173!3.36e-10!55;UBERON:0005409!3.69e-09!35;UBERON:0002417!4.24e-09!61;UBERON:0000916!4.24e-09!61;UBERON:0001007!2.56e-08!155;UBERON:0001555!2.56e-08!155;UBERON:0007026!2.56e-08!155;UBERON:0004119!1.86e-07!169;UBERON:0000925!1.86e-07!169;UBERON:0006595!1.86e-07!169;UBERON:0002530!2.56e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.15e-44;4!UBERON:0002107;8.07e-33;19!UBERON:0006925;8.07e-33;19!UBERON:0002423;4.73e-25;25!UBERON:0002365;3.17e-20;31!UBERON:0002330;3.17e-20;31!UBERON:0002368;1.73e-17;33!UBERON:0000160;5.25e-13;17!UBERON:0000949;1.03e-12;43!UBERON:0001007;1.50e-11;81!UBERON:0005409;2.49e-10;22!UBERON:0002114;1.67e-09;2!UBERON:0005172;3.42e-09;52!UBERON:0005173;3.42e-09;52!UBERON:0002417;3.97e-07;58!UBERON:0000916;3.97e-07;58!UBERON:0002530;9.74e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,9.94e-45,4;UBERON:0002107,8.62e-33,19;UBERON:0006925,8.62e-33,19;UBERON:0008836,8.62e-33,19;UBERON:0008835,2.20e-28,22;UBERON:0003894,2.20e-28,22;UBERON:0009854,3.61e-27,23;UBERON:0007499,4.98e-25,25;UBERON:0009497,4.98e-25,25;UBERON:0000015,4.98e-25,25;UBERON:0002423,4.98e-25,25;UBERON:0006235,4.98e-25,25;UBERON:0004161,4.98e-25,25;UBERON:0009856,4.40e-24,26;UBERON:0002365,2.91e-20,31;UBERON:0002330,2.91e-20,31;UBERON:0002368,5.48e-18,35;UBERON:0000949,4.63e-14,45;UBERON:0004921,2.56e-13,118;UBERON:0000160,5.04e-13,17;UBERON:0003929,9.21e-12,54;UBERON:0005172,9.21e-12,54;UBERON:0005173,9.21e-12,54;UBERON:0001007,7.53e-11,145;UBERON:0001555,7.53e-11,145;UBERON:0007026,7.53e-11,145;UBERON:0002530,8.72e-11,59;UBERON:0002417,1.31e-10,60;UBERON:0000916,1.31e-10,60;UBERON:0004119,7.84e-10,160;UBERON:0000925,7.84e-10,160;UBERON:0006595,7.84e-10,160;UBERON:0002114,1.67e-09,2;UBERON:0005409,3.16e-09,25;UBERON:0005911,8.19e-08,82;UBERON:0001041,2.26e-07,87;UBERON:0011216,6.23e-07,223 | |||
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|short_description=p@chr19:4164515..4164523,+ | |short_description=p@chr19:4164515..4164523,+ | ||
}} | }} |
Latest revision as of 07:59, 26 July 2015
Short description: | p@chr19:4164515..4164523, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:4164515..4164523, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.26e-19 | 12 |