FFCP PHASE1:Hg19::chr12:41582103..41582130,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:41582103..41582130,+
|short_description=p3@PDZRN4
|description=CAGE_peak_3_at_PDZRN4_5end
|association_with_transcript=-119bp_to_ENST00000402685,NM_001164...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29951 | |EntrezGene=29951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30552 | |HGNC=30552 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZMN7,B4DGD1 | |UniProt=Q6ZMN7,B4DGD1 | ||
|association_with_transcript=-119bp_to_ENST00000402685,NM_001164595_5end | |||
|cluster_id=chr12:41582103..41582130,+ | |||
|description=CAGE_peak_3_at_PDZRN4_5end | |||
|id=chr12:41582103..41582130,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.88e-18;2!UBERON:0006215;7.77e-12;3!UBERON:0004874;4.08e-10;1!UBERON:0005754;4.86e-10;1!UBERON:0006242;8.17e-10;1!UBERON:0001045;1.68e-09;1!UBERON:0006603;1.47e-08;65!UBERON:0009117;4.11e-08;10!UBERON:0005564;4.11e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@PDZRN4 | |||
}} | }} |
Latest revision as of 07:37, 18 September 2015
Short description: | p3@PDZRN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PDZRN4_5end |
Coexpression cluster: | NA |
Association with transcript: | -119bp_to_ENST00000402685, NM_001164595_5end |
EntrezGene: | PDZRN4 |
HGNC: | 30552 |
UniProt: | Q6ZMN7B4DGD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.59e-32 | 114 |
male reproductive organ | 1.18e-27 | 11 |
male genital duct | 9.56e-27 | 3 |
internal male genitalia | 9.56e-27 | 3 |
duct of male reproductive system | 3.20e-20 | 4 |
male organism | 2.44e-18 | 22 |
male reproductive system | 2.44e-18 | 22 |
reproductive structure | 2.36e-10 | 59 |
reproductive system | 2.36e-10 | 59 |
reproductive organ | 2.66e-10 | 48 |
epididymis | 3.74e-10 | 1 |
penis | 4.09e-10 | 1 |
intromittent organ | 4.09e-10 | 1 |
lateral plate mesenchyme | 4.09e-10 | 1 |
undifferentiated genital tubercle | 4.09e-10 | 1 |
somatopleure | 4.09e-10 | 1 |
testis | 4.23e-10 | 8 |
vas deferens | 4.46e-10 | 1 |
spermatic cord | 4.46e-10 | 1 |
seminal vesicle | 4.87e-10 | 1 |
seminal fluid secreting gland | 4.87e-10 | 1 |
vermiform appendix | 1.25e-09 | 1 |
caecum | 1.25e-09 | 1 |
midgut | 1.25e-09 | 1 |
mitral valve | 2.67e-09 | 1 |
posterior neural tube | 6.05e-09 | 15 |
chordal neural plate | 6.05e-09 | 15 |
colon | 8.52e-09 | 9 |
regional part of metencephalon | 1.27e-08 | 9 |
metencephalon | 1.27e-08 | 9 |
future metencephalon | 1.27e-08 | 9 |
urogenital ridge | 1.09e-07 | 11 |
intermediate mesoderm | 1.77e-07 | 28 |
large intestine | 2.78e-07 | 11 |
body cavity precursor | 7.05e-07 | 54 |