FFCP PHASE1:Hg19::chr1:154377675..154377692,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3570 | |EntrezGene=3570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6019 | |HGNC=6019 | ||
|TSSclassifier=strong | |||
|UniProt=P08887,A0N0L5 | |UniProt=P08887,A0N0L5 | ||
|association_with_transcript=-6bp_to_,6bp_to_ENST00000344086,ENST00000368485,NM_000565,NM_001206866,NM_181359,uc001fez.1,uc001ffa.1_5end | |association_with_transcript=-6bp_to_,6bp_to_ENST00000344086,ENST00000368485,NM_000565,NM_001206866,NM_181359,uc001fez.1,uc001ffa.1_5end | ||
|cluster_id=chr1:154377675..154377692,+ | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_7_at_IL6R_5end | |description=CAGE_peak_7_at_IL6R_5end | ||
|id=chr1:154377675..154377692,+ | |id=chr1:154377675..154377692,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.03e-23!18;CL:0000789!1.03e-23!18;CL:0002420!1.03e-23!18;CL:0002419!1.03e-23!18;CL:0000790!1.03e-23!18;CL:0000838!6.22e-19!52;CL:0000542!2.08e-18!53;CL:0000051!2.08e-18!53;CL:0000084!1.15e-17!25;CL:0000827!1.15e-17!25;CL:0000625!2.37e-15!11;CL:0000624!7.84e-12!6;CL:0000738!1.47e-09!140;CL:0002087!1.10e-08!119;CL:0002031!9.71e-08!124;CL:0000898!7.64e-07!3;CL:0000080!8.04e-07!6 | |ontology_enrichment_celltype=CL:0000791!1.03e-23!18;CL:0000789!1.03e-23!18;CL:0002420!1.03e-23!18;CL:0002419!1.03e-23!18;CL:0000790!1.03e-23!18;CL:0000838!6.22e-19!52;CL:0000542!2.08e-18!53;CL:0000051!2.08e-18!53;CL:0000084!1.15e-17!25;CL:0000827!1.15e-17!25;CL:0000625!2.37e-15!11;CL:0000624!7.84e-12!6;CL:0000738!1.47e-09!140;CL:0002087!1.10e-08!119;CL:0002031!9.71e-08!124;CL:0000898!7.64e-07!3;CL:0000080!8.04e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.62e-53;18!CL:0000789;7.62e-53;18!CL:0002419;7.62e-53;18!CL:0000084;2.48e-37;25!CL:0000624;1.62e-35;6!CL:0000625;2.76e-25;11!CL:0000898;6.71e-19;3!CL:0000815;3.77e-13;2!CL:0000792;3.77e-13;2!CL:0002677;3.77e-13;2!CL:0000226;1.19e-08;3!CL:0000842;1.19e-08;3!CL:0000542;1.39e-08;53!CL:0000895;1.79e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.72e-53,18;CL:0000789,7.72e-53,18;CL:0002420,7.72e-53,18;CL:0002419,7.72e-53,18;CL:0000790,7.72e-53,18;CL:0000084,2.51e-37,25;CL:0000827,2.51e-37,25;CL:0000624,9.23e-36,6;CL:0000625,3.94e-25,11;CL:0000838,1.93e-19,52;CL:0000898,3.90e-19,3;CL:0000542,5.09e-19,53;CL:0000051,5.09e-19,53;CL:0000815,2.12e-13,2;CL:0000792,2.12e-13,2;CL:0002677,2.12e-13,2;CL:0002087,1.13e-09,115;CL:0000226,1.29e-08,3;CL:0000842,1.29e-08,3;CL:0000738,1.06e-07,136;CL:0000810,1.85e-07,1;CL:0000895,1.85e-07,1;CL:0002436,1.85e-07,1;CL:0002427,1.85e-07,1;CL:0002428,1.85e-07,1;CL:0002429,1.85e-07,1;CL:0002433,1.85e-07,1;CL:0002431,1.85e-07,1;CL:0002432,1.85e-07,1;CL:0002031,9.02e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;7.62e-53;18!CL:0000051;1.39e-08;53!CL:0002427;1.79e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;1.79e-07;1!DOID:0070004;1.79e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.97e-07,1;DOID:0070004,1.97e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-11!115;UBERON:0000178!1.26e-09!15;UBERON:0000179!1.26e-09!15;UBERON:0000463!1.26e-09!15 | |ontology_enrichment_uberon=UBERON:0007023!1.05e-11!115;UBERON:0000178!1.26e-09!15;UBERON:0000179!1.26e-09!15;UBERON:0000463!1.26e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;4.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,4.34e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.868043482863407,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0,0,0,0.382273228125229,0,0,0,1.7703879310245,1.17903228824749,3.28962398399215,1.5046784585161,1.95553359980154,1.4203434172042,0,2.00538822393312,7.36514768687093,5.31681347000691,4.06205795647523,2.68991771423918,3.51160238411671,0.164437904603676,0.276350017785848,0,1.92772532110679,1.60524496853828,2.09071047609954,0.566546713487831,2.29932296161153,1.71813722741315,1.51811815211702,1.27426165729639,0.651083453856419,0,1.6563263098555,1.53583933385302,2.49861453104692,1.18388626022008,2.46338399076314,0.403213486449465,0.534880391567015,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0.898401253958239,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.72571360654893,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0.507447609232169,0,0,1.42939065274673,0,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0.276283915531148,0,0,0.738508832766417,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.213574825135389,0,0.828478110694391,1.48849806543585,4.34745590175477,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0,0.194860308839388,0.531459361253452,0.163565394255844,0,0,0,0,0,2.2387947355906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.88332946650923,0,0.183428598521679,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0.163771917510097,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0.917458566809082,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.740872583160463,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,1.20764276154616,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.868043482863407,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0,0,0,0.382273228125229,0,0,0,1.7703879310245,1.17903228824749,3.28962398399215,1.5046784585161,1.95553359980154,1.4203434172042,0,2.00538822393312,7.36514768687093,5.31681347000691,4.06205795647523,2.68991771423918,3.51160238411671,0.164437904603676,0.276350017785848,0,1.92772532110679,1.60524496853828,2.09071047609954,0.566546713487831,2.29932296161153,1.71813722741315,1.51811815211702,1.27426165729639,0.651083453856419,0,1.6563263098555,1.53583933385302,2.49861453104692,1.18388626022008,2.46338399076314,0.403213486449465,0.534880391567015,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0.898401253958239,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.72571360654893,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0.507447609232169,0,0,1.42939065274673,0,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0.276283915531148,0,0,0.738508832766417,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.213574825135389,0,0.828478110694391,1.48849806543585,4.34745590175477,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0,0.194860308839388,0.531459361253452,0.163565394255844,0,0,0,0,0,2.2387947355906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.88332946650923,0,0.183428598521679,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0.163771917510097,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0.917458566809082,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.740872583160463,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,1.20764276154616,0.320568492303233 | ||
|short_description=p7@IL6R | |short_description=p7@IL6R | ||
}} | }} |
Latest revision as of 09:07, 17 September 2015
Short description: | p7@IL6R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IL6R_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | -6bp_to_, 6bp_to_ENST00000344086, ENST00000368485, NM_000565, NM_001206866, NM_181359, uc001fez.1, uc001ffa.1_5end |
EntrezGene: | IL6R |
HGNC: | 6019 |
UniProt: | P08887A0N0L5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.97e-07 | 1 |
myeloma | 1.97e-07 | 1 |