FFCP PHASE1:Hg19::chr12:54689532..54689551,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:54689532..54689551,-
|short_description=p4@NFE2
|description=CAGE_peak_4_at_NFE2_5end
|association_with_transcript=0bp_to_ENST00000312156,ENST00000540264,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4778 | |EntrezGene=4778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7780 | |HGNC=7780 | ||
|TSSclassifier=strong | |||
|UniProt=Q16621,A8K3E0 | |UniProt=Q16621,A8K3E0 | ||
|association_with_transcript=0bp_to_ENST00000312156,ENST00000540264,NM_006163,uc001sfq.2,uc009znk.2_5end | |||
|cluster_id=chr12:54689532..54689551,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_4_at_NFE2_5end | |||
|id=chr12:54689532..54689551,- | |||
|ontology_enrichment_celltype=CL:0000842!2.94e-08!3;CL:0000763!4.02e-07!112;CL:0000049!4.02e-07!112;CL:0000764!5.62e-07!2;CL:0000765!5.62e-07!2;CL:0000050!5.62e-07!2;CL:0000038!5.62e-07!2;CL:0000558!5.62e-07!2;CL:0000547!5.62e-07!2;CL:0000549!5.62e-07!2;CL:0000550!5.62e-07!2;CL:0000552!5.62e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;9.52e-14;2!CL:0000558;9.52e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,9.52e-14,2;CL:0000765,9.52e-14,2;CL:0000050,9.52e-14,2;CL:0000038,9.52e-14,2;CL:0000558,9.52e-14,2;CL:0000547,9.52e-14,2;CL:0000549,9.52e-14,2;CL:0000550,9.52e-14,2;CL:0000552,9.52e-14,2;CL:0000763,4.71e-08,108;CL:0000049,4.71e-08,108 | |||
|ontology_enrichment_development_v019=UBERON:0004140;6.77e-07;1 | |||
|ontology_enrichment_disease=DOID:8692!4.29e-16!31;DOID:1036!1.65e-12!8;DOID:1240!5.60e-12!39;DOID:2531!2.82e-08!51;DOID:0060083!2.82e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.97e-27;8!DOID:8692;3.11e-21;31!DOID:1240;3.06e-13;39!DOID:2531;1.44e-08;51!DOID:0060083;1.44e-08;51!DOID:8552;2.67e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.06e-27,8;DOID:8692,1.24e-21,31;DOID:1240,9.11e-17,39;DOID:2531,2.49e-12,51;DOID:0060083,2.49e-12,51;DOID:8552,2.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!9.02e-24!15;UBERON:0000179!9.02e-24!15;UBERON:0000463!9.02e-24!15;UBERON:0007023!1.47e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.23e-37;15!UBERON:0000179;1.23e-37;15!UBERON:0000463;1.23e-37;15!UBERON:0002390;3.67e-19;32!UBERON:0002193;6.74e-10;42!UBERON:0005795;5.50e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.28e-37,15;UBERON:0000179,1.28e-37,15;UBERON:0000463,1.28e-37,15 | |||
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| ||
|short_description=p4@NFE2 | |||
}} | }} |
Latest revision as of 05:42, 19 September 2015
Short description: | p4@NFE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NFE2_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000312156, ENST00000540264, NM_006163, uc001sfq.2, uc009znk.2_5end |
EntrezGene: | NFE2 |
HGNC: | 7780 |
UniProt: | Q16621A8K3E0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 9.52e-14 | 2 |
erythroblast | 9.52e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 9.52e-14 | 2 |
erythroid progenitor cell | 9.52e-14 | 2 |
reticulocyte | 9.52e-14 | 2 |
proerythroblast | 9.52e-14 | 2 |
basophilic erythroblast | 9.52e-14 | 2 |
polychromatophilic erythroblast | 9.52e-14 | 2 |
orthochromatic erythroblast | 9.52e-14 | 2 |
myeloid cell | 4.71e-08 | 108 |
common myeloid progenitor | 4.71e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 1.28e-37 | 15 |
haemolymphatic fluid | 1.28e-37 | 15 |
organism substance | 1.28e-37 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.06e-27 | 8 |
myeloid leukemia | 1.24e-21 | 31 |
leukemia | 9.11e-17 | 39 |
hematologic cancer | 2.49e-12 | 51 |
immune system cancer | 2.49e-12 | 51 |
chronic myeloid leukemia | 2.67e-07 | 1 |