FFCP PHASE1:Hg19::chr12:54691711..54691725,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:54691711..54691725,-
|short_description=p7@NFE2
|description=CAGE_peak_7_at_NFE2_5end
|association_with_transcript=-43bp_to_ENST00000553198_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4778 | |EntrezGene=4778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7780 | |HGNC=7780 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1N9 | |UniProt=F8W1N9 | ||
|association_with_transcript=-43bp_to_ENST00000553198_5end | |||
|cluster_id=chr12:54691711..54691725,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_7_at_NFE2_5end | |||
|id=chr12:54691711..54691725,- | |||
|ontology_enrichment_celltype=CL:0000763!1.17e-47!112;CL:0000049!1.17e-47!112;CL:0002057!4.66e-35!42;CL:0000860!5.95e-34!45;CL:0000037!1.89e-33!172;CL:0000566!1.89e-33!172;CL:0002032!6.63e-31!165;CL:0000837!6.63e-31!165;CL:0000988!1.95e-30!182;CL:0000766!2.36e-28!76;CL:0000839!2.36e-23!70;CL:0002194!4.96e-22!63;CL:0000576!4.96e-22!63;CL:0000040!4.96e-22!63;CL:0000559!4.96e-22!63;CL:0002009!4.88e-21!65;CL:0000557!1.17e-19!71;CL:0000738!2.07e-15!140;CL:0002087!2.26e-12!119;CL:0002031!9.61e-12!124;CL:0000094!1.68e-10!8;CL:0002393!4.88e-08!9;CL:0002397!4.88e-08!9;CL:0000081!2.96e-07!11;CL:0000775!9.82e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000775;3.68e-14;3!CL:0000763;6.82e-14;100!CL:0000094;9.17e-14;8!CL:0000764;3.96e-10;2!CL:0000558;3.96e-10;2!CL:0000081;6.28e-10;11!CL:0000860;2.73e-09;33!CL:0002057;2.73e-09;33!CL:0000766;2.56e-07;69!CL:0000473;3.19e-07;39!CL:0000234;3.19e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,6.82e-33,108;CL:0000049,6.82e-33,108;CL:0000037,4.38e-23,168;CL:0002032,8.43e-23,161;CL:0000837,8.43e-23,161;CL:0000988,1.60e-21,177;CL:0000775,3.45e-14,3;CL:0000094,8.59e-14,8;CL:0000766,3.82e-11,72;CL:0000764,3.97e-10,2;CL:0000765,3.97e-10,2;CL:0000050,3.97e-10,2;CL:0000038,3.97e-10,2;CL:0000558,3.97e-10,2;CL:0000547,3.97e-10,2;CL:0000549,3.97e-10,2;CL:0000550,3.97e-10,2;CL:0000552,3.97e-10,2;CL:0000081,6.00e-10,11;CL:0000860,9.98e-10,42;CL:0002057,9.98e-10,42;CL:0000473,2.97e-08,48;CL:0000234,2.97e-08,48;CL:0000839,8.26e-08,66;CL:0000134,5.71e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000049;5.08e-13;108!CL:0002057;3.90e-08;42 | |||
|ontology_enrichment_disease=DOID:8692!3.22e-18!31;DOID:1240!8.39e-15!39;DOID:1036!1.89e-10!8;DOID:2531!7.19e-10!51;DOID:0060083!7.19e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.80e-23;31!DOID:1240;4.78e-17;39!DOID:1036;5.55e-13;8!DOID:2531;1.14e-10;51!DOID:0060083;1.14e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.31e-24,31;DOID:1240,2.95e-21,39;DOID:2531,1.87e-15,51;DOID:0060083,1.87e-15,51;DOID:1036,6.66e-13,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.06e-32!102;UBERON:0003061!8.06e-32!102;UBERON:0002193!7.02e-29!112;UBERON:0002371!1.50e-17!80;UBERON:0000178!8.78e-16!15;UBERON:0000179!8.78e-16!15;UBERON:0000463!8.78e-16!15;UBERON:0001474!1.35e-15!86;UBERON:0002405!4.76e-14!115;UBERON:0007023!4.51e-13!115;UBERON:0004765!8.80e-12!101;UBERON:0001434!8.80e-12!101;UBERON:0003081!6.31e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.36e-23;15!UBERON:0000179;1.36e-23;15!UBERON:0000463;1.36e-23;15!UBERON:0002390;2.93e-16;32!UBERON:0002193;2.28e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.37e-23,15;UBERON:0000179,1.37e-23,15;UBERON:0000463,1.37e-23,15;UBERON:0002390,1.49e-17,98;UBERON:0003061,1.49e-17,98;UBERON:0002193,1.91e-15,108 | |||
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| ||
|short_description=p7@NFE2 | |||
}} | }} |
Latest revision as of 05:42, 19 September 2015
Short description: | p7@NFE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NFE2_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -43bp_to_ENST00000553198_5end |
EntrezGene: | NFE2 |
HGNC: | 7780 |
UniProt: | F8W1N9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 6.82e-33 | 108 |
common myeloid progenitor | 6.82e-33 | 108 |
hematopoietic stem cell | 4.38e-23 | 168 |
hematopoietic oligopotent progenitor cell | 8.43e-23 | 161 |
hematopoietic multipotent progenitor cell | 8.43e-23 | 161 |
hematopoietic cell | 1.60e-21 | 177 |
neutrophil | 3.45e-14 | 3 |
granulocyte | 8.59e-14 | 8 |
myeloid leukocyte | 3.82e-11 | 72 |
erythroid lineage cell | 3.97e-10 | 2 |
erythroblast | 3.97e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 3.97e-10 | 2 |
erythroid progenitor cell | 3.97e-10 | 2 |
reticulocyte | 3.97e-10 | 2 |
proerythroblast | 3.97e-10 | 2 |
basophilic erythroblast | 3.97e-10 | 2 |
polychromatophilic erythroblast | 3.97e-10 | 2 |
orthochromatic erythroblast | 3.97e-10 | 2 |
blood cell | 6.00e-10 | 11 |
classical monocyte | 9.98e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.98e-10 | 42 |
defensive cell | 2.97e-08 | 48 |
phagocyte | 2.97e-08 | 48 |
myeloid lineage restricted progenitor cell | 8.26e-08 | 66 |
mesenchymal cell | 5.71e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
blood | 1.37e-23 | 15 |
haemolymphatic fluid | 1.37e-23 | 15 |
organism substance | 1.37e-23 | 15 |
hematopoietic system | 1.49e-17 | 98 |
blood island | 1.49e-17 | 98 |
hemolymphoid system | 1.91e-15 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.31e-24 | 31 |
leukemia | 2.95e-21 | 39 |
hematologic cancer | 1.87e-15 | 51 |
immune system cancer | 1.87e-15 | 51 |
chronic leukemia | 6.66e-13 | 8 |