FFCP PHASE1:Hg19::chr1:2487249..2487287,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8764 | |EntrezGene=8764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |HGNC=11912 | ||
|TSSclassifier=strong | |||
|UniProt=F6Q0M4 | |UniProt=F6Q0M4 | ||
|association_with_transcript=8bp_to_ENST00000435221_5end | |association_with_transcript=8bp_to_ENST00000435221_5end | ||
|cluster_id=chr1:2487249..2487287,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_TNFRSF14_5end | |description=CAGE_peak_3_at_TNFRSF14_5end | ||
|id=chr1:2487249..2487287,+ | |id=chr1:2487249..2487287,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.32e-45!140;CL:0002031!2.07e-37!124;CL:0000766!2.13e-36!76;CL:0002087!1.09e-35!119;CL:0000037!3.85e-32!172;CL:0000566!3.85e-32!172;CL:0000988!2.97e-31!182;CL:0000557!6.18e-31!71;CL:0000839!1.24e-30!70;CL:0002057!2.54e-30!42;CL:0002032!5.24e-30!165;CL:0000837!5.24e-30!165;CL:0002009!8.01e-29!65;CL:0002194!4.52e-28!63;CL:0000576!4.52e-28!63;CL:0000040!4.52e-28!63;CL:0000559!4.52e-28!63;CL:0000860!1.86e-26!45;CL:0000763!1.86e-21!112;CL:0000049!1.86e-21!112;CL:0000134!2.62e-08!358;CL:0000542!4.40e-08!53;CL:0000051!4.40e-08!53;CL:0000838!6.26e-08!52;CL:0002320!9.16e-08!365;CL:0002393!3.16e-07!9;CL:0002397!3.16e-07!9;CL:0000219!6.35e-07!390 | |ontology_enrichment_celltype=CL:0000738!4.32e-45!140;CL:0002031!2.07e-37!124;CL:0000766!2.13e-36!76;CL:0002087!1.09e-35!119;CL:0000037!3.85e-32!172;CL:0000566!3.85e-32!172;CL:0000988!2.97e-31!182;CL:0000557!6.18e-31!71;CL:0000839!1.24e-30!70;CL:0002057!2.54e-30!42;CL:0002032!5.24e-30!165;CL:0000837!5.24e-30!165;CL:0002009!8.01e-29!65;CL:0002194!4.52e-28!63;CL:0000576!4.52e-28!63;CL:0000040!4.52e-28!63;CL:0000559!4.52e-28!63;CL:0000860!1.86e-26!45;CL:0000763!1.86e-21!112;CL:0000049!1.86e-21!112;CL:0000134!2.62e-08!358;CL:0000542!4.40e-08!53;CL:0000051!4.40e-08!53;CL:0000838!6.26e-08!52;CL:0002320!9.16e-08!365;CL:0002393!3.16e-07!9;CL:0002397!3.16e-07!9;CL:0000219!6.35e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.37e-31;33!CL:0002057;2.37e-31;33!CL:0000473;5.52e-31;39!CL:0000234;5.52e-31;39!CL:0000576;7.76e-27;48!CL:0000766;4.35e-25;69!CL:0002087;2.81e-13;104!CL:0000738;1.30e-11;136!CL:0000763;5.80e-11;100!CL:0000094;1.19e-08;8!CL:0000988;7.04e-08;177!CL:0000235;3.69e-07;6!CL:0002393;4.46e-07;6!CL:0002397;4.46e-07;6!CL:0000081;9.24e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.57e-60,72;CL:0000738,9.68e-55,136;CL:0000557,2.95e-52,67;CL:0000839,5.13e-50,66;CL:0002009,6.92e-49,61;CL:0000473,1.02e-48,48;CL:0000234,1.02e-48,48;CL:0002194,7.68e-48,59;CL:0000576,7.68e-48,59;CL:0000040,7.68e-48,59;CL:0000559,7.68e-48,59;CL:0002031,3.26e-47,120;CL:0002087,7.15e-45,115;CL:0000860,8.01e-43,42;CL:0002057,8.01e-43,42;CL:0000037,9.84e-40,168;CL:0002032,1.92e-38,161;CL:0000837,1.92e-38,161;CL:0000988,2.65e-37,177;CL:0000763,7.07e-36,108;CL:0000049,7.07e-36,108;CL:0000134,1.87e-11,354;CL:0002320,6.98e-11,361;CL:0000219,1.45e-10,386;CL:0002393,1.11e-09,9;CL:0002397,1.11e-09,9;CL:0000094,1.22e-08,8;CL:0000235,3.81e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;7.14e-31;42!CL:0000049;5.65e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.93e-34!112;UBERON:0002390!4.95e-33!102;UBERON:0003061!4.95e-33!102;UBERON:0002405!5.58e-29!115;UBERON:0002371!3.55e-28!80;UBERON:0001474!1.21e-25!86;UBERON:0004765!1.01e-19!101;UBERON:0001434!1.01e-19!101;UBERON:0007023!2.48e-10!115;UBERON:0003081!2.23e-08!216;UBERON:0002384!3.81e-07!375;UBERON:0002204!4.91e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,5.84e-48,93;UBERON:0002193,1.47e-47,108;UBERON:0002390,3.65e-46,98;UBERON:0003061,3.65e-46,98;UBERON:0002371,5.88e-46,76;UBERON:0001474,6.62e-42,82;UBERON:0004765,8.36e-36,90;UBERON:0001434,1.27e-29,100;UBERON:0003081,6.17e-16,203;UBERON:0002204,2.04e-11,167;UBERON:0002384,4.05e-10,371;UBERON:0000926,2.01e-08,315;UBERON:0004120,2.01e-08,315;UBERON:0006603,2.01e-08,315 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.563817616383885,1.0007329835313,2.68176656656373,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0,0,3.43860325865781,2.05251473624864,1.49550484495991,16.9146639045029,7.29275856384704,28.7957989367901,0,0,0,0,0.426507697462265,0.587200878669695,38.7796785972314,32.6887449376331,27.5603805809132,35.378644929908,29.7982172737461,29.1060391426631,19.7741604740208,36.6539665378145,20.6196452009644,65.0801303335917,122.116862742482,109.016642555076,54.0861697565643,84.2768724480741,50.1342327363801,101.699975817302,142.006630388442,195.014140695852,40.2838606621174,73.9575666656762,40.0007802312251,52.9525133801661,69.3206698484362,85.0318377312725,17.8119702100827,36.7013130023803,13.6391920170462,48.1747336123449,98.7250290962583,64.1506916465442,87.1832868440899,88.130613213014,69.9348079950475,37.5347691632689,95.0156300847917,56.3303049644774,21.9705497764419,24.662098795945,24.1107442334632,10.671219958917,8.25972910628285,3.85741408072992,26.2211724241949,19.6927510427099,17.3530946076402,0,1.09227722252426,0.889509253863555,6.40095333849761,0.400395987036012,0.574752439954483,1.32208974556972,0.954053754535364,7.39976859842283,8.80855784056408,8.79228424688026,1.32171328579026,7.8471198817415,0,1.96709770113833,2.35806457649499,1.64481199199607,3.51091640320424,1.62961133316795,1.4203434172042,3.89653456815823,4.12218690475142,1.47302953737419,1.32920336750173,0.270803863765016,3.71464827204458,4.1618991219161,2.95988228286617,4.69795030235942,4.92665245749589,1.03800594213442,0.802622484269139,1.04535523804977,2.37949619664889,0.766440987203842,2.06176467289578,0.759059076058509,0.318565414324097,0.651083453856419,0,1.6563263098555,0.76791966692651,1.24930726552346,0.947109008176067,1.64225599384209,4.83856183739358,3.7441627409691,1.88271725047639,0,0,0,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0,1.96468613246569,0.728590576585084,0,8.76277962867645,8.88061660226263,12.8969221703299,1.19245312152671,2.28797964312051,0.371457501329565,0.198762407366705,0,0,0,0,0.825354125820202,0,3.35941786920128,3.5576626268671,2.67776490211736,1.20848795132744,0,1.22031028774085,0,0,0.357198913136319,1.12264686313085,0.337834441449967,0,0,0,60.6189920205891,81.4338554711483,0,0,0,1.45650098894541,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0,0,0.723280468230358,2.37600571456411,1.48360157567134,0,0,0,0,0,0,0,0.751190294532984,0,0.179389635688862,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.773043412653187,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,4.42893272774789,0,0,0,0,0.982827216677626,1.18157981336281,0.441463099414651,1.22988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,1.01056513432752,3.24089858803628,1.14152491340759,0,0,31.2695597730995,29.0165288772655,23.0378301547529,0.93733833986777,0.16798212819886,0,0,0,0,1.97065295158377,13.7355557060633,36.6970764507167,43.2359860250884,44.6898214329385,8.06423257510547,12.6056180434232,7.03304683260282,5.13217338068116,22.8277033801378,4.80548892550268,12.862189468376,0,0,0,0,3.57656445851882,0,2.92531928243358,1.04007436911366,0,0,0,0.285955987316295,0,0,0,1.06617584622764,0,0.602878754119172,0,0,38.919609805181,27.1218829373348,33.7334303172851,0,1.14861935834114,0,0,0.410952645100767,0.179060963239896,1.68127715990291,4.92576900504818,3.45004119775228,7.18721003166591,0,0,0,0,0,12.7331194071021,11.966458368161,9.94597232246485,0,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.347534457872331,0.979005787313703,1.02943027143257,5.37596867919507,9.27571063520052,6.5103810260101,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0.483437798366489,0,0.276242966807689,0,0,3.2781103739856,0,0.0770153371044148,0,1.46139224653261,0,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.261435451024901,6.92415337814251,1.31205858279882,5.85681110395745,1.64865618636356,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0.170453254832202,0,0,0,0.255225424989168,0.10115778085555,0,0.62962469366128,0,0,0,0.869932992075073,0,0.143124886741991,0,0.632758849437452,0.38126038784765,0,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0.709522128141196,0.211107635297664,0.329294892959902,0,0,0,0,0,2.2594512186427,0,0,0,0.229723400206959,1.52234282769651,2.29391162142713,1.70894156152249,0.952927101831156,2.05681136543097,0.648473311192717,0,0.79312517629427,0,0,0,0.929015875628594,0.28853842595289,0.995985806877798,0,0,0.5745161103971,3.38677732358213,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,1.4098700508785,0.37428108081644,5.56731081233197,0,0.445773537109913,0,0,0.296964680832639,0,1.9882952955326,0.703347082052564,0.6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|phase1_expression=0.54503513781167,1.07050261945492,0.563817616383885,1.0007329835313,2.68176656656373,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0,0,3.43860325865781,2.05251473624864,1.49550484495991,16.9146639045029,7.29275856384704,28.7957989367901,0,0,0,0,0.426507697462265,0.587200878669695,38.7796785972314,32.6887449376331,27.5603805809132,35.378644929908,29.7982172737461,29.1060391426631,19.7741604740208,36.6539665378145,20.6196452009644,65.0801303335917,122.116862742482,109.016642555076,54.0861697565643,84.2768724480741,50.1342327363801,101.699975817302,142.006630388442,195.014140695852,40.2838606621174,73.9575666656762,40.0007802312251,52.9525133801661,69.3206698484362,85.0318377312725,17.8119702100827,36.7013130023803,13.6391920170462,48.1747336123449,98.7250290962583,64.1506916465442,87.1832868440899,88.130613213014,69.9348079950475,37.5347691632689,95.0156300847917,56.3303049644774,21.9705497764419,24.662098795945,24.1107442334632,10.671219958917,8.25972910628285,3.85741408072992,26.2211724241949,19.6927510427099,17.3530946076402,0,1.09227722252426,0.889509253863555,6.40095333849761,0.400395987036012,0.574752439954483,1.32208974556972,0.954053754535364,7.39976859842283,8.80855784056408,8.79228424688026,1.32171328579026,7.8471198817415,0,1.96709770113833,2.35806457649499,1.64481199199607,3.51091640320424,1.62961133316795,1.4203434172042,3.89653456815823,4.12218690475142,1.47302953737419,1.32920336750173,0.270803863765016,3.71464827204458,4.1618991219161,2.95988228286617,4.69795030235942,4.92665245749589,1.03800594213442,0.802622484269139,1.04535523804977,2.37949619664889,0.766440987203842,2.06176467289578,0.759059076058509,0.318565414324097,0.651083453856419,0,1.6563263098555,0.76791966692651,1.24930726552346,0.947109008176067,1.64225599384209,4.83856183739358,3.7441627409691,1.88271725047639,0,0,0,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0,1.96468613246569,0.728590576585084,0,8.76277962867645,8.88061660226263,12.8969221703299,1.19245312152671,2.28797964312051,0.371457501329565,0.198762407366705,0,0,0,0,0.825354125820202,0,3.35941786920128,3.5576626268671,2.67776490211736,1.20848795132744,0,1.22031028774085,0,0,0.357198913136319,1.12264686313085,0.337834441449967,0,0,0,60.6189920205891,81.4338554711483,0,0,0,1.45650098894541,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0,0,0.723280468230358,2.37600571456411,1.48360157567134,0,0,0,0,0,0,0,0.751190294532984,0,0.179389635688862,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.773043412653187,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,4.42893272774789,0,0,0,0,0.982827216677626,1.18157981336281,0.441463099414651,1.22988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,1.01056513432752,3.24089858803628,1.14152491340759,0,0,31.2695597730995,29.0165288772655,23.0378301547529,0.93733833986777,0.16798212819886,0,0,0,0,1.97065295158377,13.7355557060633,36.6970764507167,43.2359860250884,44.6898214329385,8.06423257510547,12.6056180434232,7.03304683260282,5.13217338068116,22.8277033801378,4.80548892550268,12.862189468376,0,0,0,0,3.57656445851882,0,2.92531928243358,1.04007436911366,0,0,0,0.285955987316295,0,0,0,1.06617584622764,0,0.602878754119172,0,0,38.919609805181,27.1218829373348,33.7334303172851,0,1.14861935834114,0,0,0.410952645100767,0.179060963239896,1.68127715990291,4.92576900504818,3.45004119775228,7.18721003166591,0,0,0,0,0,12.7331194071021,11.966458368161,9.94597232246485,0,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.347534457872331,0.979005787313703,1.02943027143257,5.37596867919507,9.27571063520052,6.5103810260101,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0.483437798366489,0,0.276242966807689,0,0,3.2781103739856,0,0.0770153371044148,0,1.46139224653261,0,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.261435451024901,6.92415337814251,1.31205858279882,5.85681110395745,1.64865618636356,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0.170453254832202,0,0,0,0.255225424989168,0.10115778085555,0,0.62962469366128,0,0,0,0.869932992075073,0,0.143124886741991,0,0.632758849437452,0.38126038784765,0,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0.709522128141196,0.211107635297664,0.329294892959902,0,0,0,0,0,2.2594512186427,0,0,0,0.229723400206959,1.52234282769651,2.29391162142713,1.70894156152249,0.952927101831156,2.05681136543097,0.648473311192717,0,0.79312517629427,0,0,0,0.929015875628594,0.28853842595289,0.995985806877798,0,0,0.5745161103971,3.38677732358213,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,1.4098700508785,0.37428108081644,5.56731081233197,0,0.445773537109913,0,0,0.296964680832639,0,1.9882952955326,0.703347082052564,0.6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| ||
|short_description=p3@TNFRSF14 | |short_description=p3@TNFRSF14 | ||
}} | }} |
Latest revision as of 00:53, 17 September 2015
Short description: | p3@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TNFRSF14_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 8bp_to_ENST00000435221_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | F6Q0M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.57e-60 | 72 |
leukocyte | 9.68e-55 | 136 |
granulocyte monocyte progenitor cell | 2.95e-52 | 67 |
myeloid lineage restricted progenitor cell | 5.13e-50 | 66 |
macrophage dendritic cell progenitor | 6.92e-49 | 61 |
defensive cell | 1.02e-48 | 48 |
phagocyte | 1.02e-48 | 48 |
monopoietic cell | 7.68e-48 | 59 |
monocyte | 7.68e-48 | 59 |
monoblast | 7.68e-48 | 59 |
promonocyte | 7.68e-48 | 59 |
hematopoietic lineage restricted progenitor cell | 3.26e-47 | 120 |
nongranular leukocyte | 7.15e-45 | 115 |
classical monocyte | 8.01e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.01e-43 | 42 |
hematopoietic stem cell | 9.84e-40 | 168 |
hematopoietic oligopotent progenitor cell | 1.92e-38 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-38 | 161 |
hematopoietic cell | 2.65e-37 | 177 |
myeloid cell | 7.07e-36 | 108 |
common myeloid progenitor | 7.07e-36 | 108 |
mesenchymal cell | 1.87e-11 | 354 |
connective tissue cell | 6.98e-11 | 361 |
motile cell | 1.45e-10 | 386 |
intermediate monocyte | 1.11e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.11e-09 | 9 |
granulocyte | 1.22e-08 | 8 |
macrophage | 3.81e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
immune system | 5.84e-48 | 93 |
hemolymphoid system | 1.47e-47 | 108 |
hematopoietic system | 3.65e-46 | 98 |
blood island | 3.65e-46 | 98 |
bone marrow | 5.88e-46 | 76 |
bone element | 6.62e-42 | 82 |
skeletal element | 8.36e-36 | 90 |
skeletal system | 1.27e-29 | 100 |
lateral plate mesoderm | 6.17e-16 | 203 |
musculoskeletal system | 2.04e-11 | 167 |
connective tissue | 4.05e-10 | 371 |
mesoderm | 2.01e-08 | 315 |
mesoderm-derived structure | 2.01e-08 | 315 |
presumptive mesoderm | 2.01e-08 | 315 |