FFCP PHASE1:Hg19::chr1:29241128..29241159,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2035 | |EntrezGene=2035 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3377 | |HGNC=3377 | ||
|TSSclassifier=strong | |||
|UniProt=P11171,Q4VB86 | |UniProt=P11171,Q4VB86 | ||
|association_with_transcript=37bp_to_ENST00000373797,uc001brk.2,uc001brl.1,uc009vtk.1_5end | |association_with_transcript=37bp_to_ENST00000373797,uc001brk.2,uc001brl.1,uc009vtk.1_5end | ||
|cluster_id=chr1:29241128..29241159,+ | |||
|coexpression_cluster_id=C3965 | |||
|description=CAGE_peak_3_at_EPB41_5end | |description=CAGE_peak_3_at_EPB41_5end | ||
|id=chr1:29241128..29241159,+ | |id=chr1:29241128..29241159,+ | ||
|ontology_enrichment_celltype=CL:0000542!5.90e-14!53;CL:0000051!5.90e-14!53;CL:0000838!1.29e-13!52;CL:0000037!1.41e-13!172;CL:0000566!1.41e-13!172;CL:0000988!2.20e-12!182;CL:0000791!3.75e-12!18;CL:0000789!3.75e-12!18;CL:0002420!3.75e-12!18;CL:0002419!3.75e-12!18;CL:0000790!3.75e-12!18;CL:0002032!1.18e-11!165;CL:0000837!1.18e-11!165;CL:0000084!6.10e-10!25;CL:0000827!6.10e-10!25;CL:0000738!2.84e-08!140;CL:0000625!5.34e-08!11 | |ontology_enrichment_celltype=CL:0000542!5.90e-14!53;CL:0000051!5.90e-14!53;CL:0000838!1.29e-13!52;CL:0000037!1.41e-13!172;CL:0000566!1.41e-13!172;CL:0000988!2.20e-12!182;CL:0000791!3.75e-12!18;CL:0000789!3.75e-12!18;CL:0002420!3.75e-12!18;CL:0002419!3.75e-12!18;CL:0000790!3.75e-12!18;CL:0002032!1.18e-11!165;CL:0000837!1.18e-11!165;CL:0000084!6.10e-10!25;CL:0000827!6.10e-10!25;CL:0000738!2.84e-08!140;CL:0000625!5.34e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.49e-15;18!CL:0000789;7.49e-15;18!CL:0002419;7.49e-15;18!CL:0000084;7.13e-12;25!CL:0000625;1.17e-09;11!CL:0000542;3.39e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.42e-15,53;CL:0000051,4.42e-15,53;CL:0000791,7.46e-15,18;CL:0000789,7.46e-15,18;CL:0002420,7.46e-15,18;CL:0002419,7.46e-15,18;CL:0000790,7.46e-15,18;CL:0000838,1.15e-14,52;CL:0000084,6.82e-12,25;CL:0000827,6.82e-12,25;CL:0000037,2.77e-11,168;CL:0000988,1.15e-10,177;CL:0000625,1.21e-09,11;CL:0002032,2.82e-09,161;CL:0000837,2.82e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000790;7.49e-15;18!CL:0000051;3.39e-09;53 | |||
|ontology_enrichment_disease=DOID:3095!1.05e-07!22;DOID:2994!1.05e-07!22;DOID:1240!5.27e-07!39;DOID:2531!6.19e-07!51;DOID:0060083!6.19e-07!51 | |ontology_enrichment_disease=DOID:3095!1.05e-07!22;DOID:2994!1.05e-07!22;DOID:1240!5.27e-07!39;DOID:2531!6.19e-07!51;DOID:0060083!6.19e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.39e-08;22!DOID:2994;4.39e-08;22!DOID:1240;7.43e-07;39!DOID:8692;9.36e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.99e-08,22;DOID:2994,2.99e-08,22;DOID:1240,3.54e-08,39;DOID:2531,1.70e-07,51;DOID:0060083,1.70e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.49e-08!94;UBERON:0001016!9.49e-08!94;UBERON:0001017!1.29e-07!82;UBERON:0000178!2.31e-07!15;UBERON:0000179!2.31e-07!15;UBERON:0000463!2.31e-07!15;UBERON:0005743!2.75e-07!86;UBERON:0007023!5.16e-07!115 | |ontology_enrichment_uberon=UBERON:0000073!9.49e-08!94;UBERON:0001016!9.49e-08!94;UBERON:0001017!1.29e-07!82;UBERON:0000178!2.31e-07!15;UBERON:0000179!2.31e-07!15;UBERON:0000463!2.31e-07!15;UBERON:0005743!2.75e-07!86;UBERON:0007023!5.16e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.40e-08;15!UBERON:0000179;1.40e-08;15!UBERON:0000463;1.40e-08;15!UBERON:0000922;3.22e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.55e-09,15;UBERON:0000179,7.55e-09,15;UBERON:0000463,7.55e-09,15 | |||
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| ||
|short_description=p3@EPB41 | |short_description=p3@EPB41 | ||
}} | }} |
Latest revision as of 11:11, 17 September 2015
Short description: | p3@EPB41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EPB41_5end |
Coexpression cluster: | C3965_cerebellum_CD4_pineal_small_merkel_Neutrophils_CD8 |
Association with transcript: | 37bp_to_ENST00000373797, uc001brk.2, uc001brl.1, uc009vtk.1_5end |
EntrezGene: | EPB41 |
HGNC: | 3377 |
UniProt: | P11171Q4VB86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.42e-15 | 53 |
common lymphoid progenitor | 4.42e-15 | 53 |
mature alpha-beta T cell | 7.46e-15 | 18 |
alpha-beta T cell | 7.46e-15 | 18 |
immature T cell | 7.46e-15 | 18 |
mature T cell | 7.46e-15 | 18 |
immature alpha-beta T cell | 7.46e-15 | 18 |
lymphoid lineage restricted progenitor cell | 1.15e-14 | 52 |
T cell | 6.82e-12 | 25 |
pro-T cell | 6.82e-12 | 25 |
hematopoietic stem cell | 2.77e-11 | 168 |
hematopoietic cell | 1.15e-10 | 177 |
CD8-positive, alpha-beta T cell | 1.21e-09 | 11 |
hematopoietic oligopotent progenitor cell | 2.82e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.82e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 7.55e-09 | 15 |
haemolymphatic fluid | 7.55e-09 | 15 |
organism substance | 7.55e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.99e-08 | 22 |
germ cell cancer | 2.99e-08 | 22 |
leukemia | 3.54e-08 | 39 |
hematologic cancer | 1.70e-07 | 51 |
immune system cancer | 1.70e-07 | 51 |