FFCP PHASE1:Hg19::chr5:52627652..52627670,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:52627652..52627670,+ | |||
|description=CAGE_peak_at_chr5:52627652..52627670,+ | |description=CAGE_peak_at_chr5:52627652..52627670,+ | ||
|id=chr5:52627652..52627670,+ | |id=chr5:52627652..52627670,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.55e-32!43;CL:0002159!2.56e-26!13;CL:0000223!2.66e-22!59;CL:0002368!6.20e-21!13;CL:0002202!1.96e-17!9;CL:0002632!1.96e-17!9;CL:0000066!1.17e-15!254;CL:0002251!3.40e-15!21;CL:0002621!1.42e-14!3;CL:0002328!3.30e-14!3;CL:0002166!3.61e-14!3;CL:0000068!5.13e-14!3;CL:0000069!5.13e-14!3;CL:0000307!5.13e-14!3;CL:0000377!5.13e-14!3;CL:0000362!8.14e-14!8;CL:0000240!3.44e-12!6;CL:0000311!3.44e-12!6;CL:0000079!3.44e-12!6;CL:0000237!3.44e-12!6;CL:0000036!3.44e-12!6;CL:0000357!3.44e-12!6;CL:0000114!3.44e-12!6;CL:0002077!1.58e-11!33;CL:0000244!9.35e-11!4;CL:0000731!9.35e-11!4;CL:0002327!1.18e-10!4;CL:0000317!5.42e-10!2;CL:1000448!5.42e-10!2;CL:0002308!5.42e-10!2;CL:0002140!5.42e-10!2;CL:0000220!7.57e-10!246;CL:0002321!1.03e-09!248;CL:0000312!1.38e-08!5;CL:0000622!1.83e-08!5;CL:0000154!4.06e-07!6 | |ontology_enrichment_celltype=CL:0002076!2.55e-32!43;CL:0002159!2.56e-26!13;CL:0000223!2.66e-22!59;CL:0002368!6.20e-21!13;CL:0002202!1.96e-17!9;CL:0002632!1.96e-17!9;CL:0000066!1.17e-15!254;CL:0002251!3.40e-15!21;CL:0002621!1.42e-14!3;CL:0002328!3.30e-14!3;CL:0002166!3.61e-14!3;CL:0000068!5.13e-14!3;CL:0000069!5.13e-14!3;CL:0000307!5.13e-14!3;CL:0000377!5.13e-14!3;CL:0000362!8.14e-14!8;CL:0000240!3.44e-12!6;CL:0000311!3.44e-12!6;CL:0000079!3.44e-12!6;CL:0000237!3.44e-12!6;CL:0000036!3.44e-12!6;CL:0000357!3.44e-12!6;CL:0000114!3.44e-12!6;CL:0002077!1.58e-11!33;CL:0000244!9.35e-11!4;CL:0000731!9.35e-11!4;CL:0002327!1.18e-10!4;CL:0000317!5.42e-10!2;CL:1000448!5.42e-10!2;CL:0002308!5.42e-10!2;CL:0002140!5.42e-10!2;CL:0000220!7.57e-10!246;CL:0002321!1.03e-09!248;CL:0000312!1.38e-08!5;CL:0000622!1.83e-08!5;CL:0000154!4.06e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002159;2.01e-28;14!CL:0002621;5.06e-26;3!CL:0002368;7.67e-23;13!CL:0002076;9.19e-23;42!CL:0000244;2.85e-19;4!CL:0000731;2.85e-19;4!CL:0000317;2.31e-17;2!CL:1000448;2.31e-17;2!CL:0002308;2.31e-17;2!CL:0002140;2.31e-17;2!CL:0002202;3.14e-15;9!CL:0002632;3.14e-15;9!CL:0000362;4.13e-15;9!CL:0000240;2.61e-13;6!CL:0000311;2.61e-13;6!CL:0000079;2.61e-13;6!CL:0000237;2.61e-13;6!CL:0002328;2.69e-12;3!CL:0002166;2.69e-12;3!CL:0000307;3.67e-12;3!CL:0002251;2.14e-10;20!CL:0002077;2.65e-10;34!CL:0002336;1.10e-09;1!CL:0002261;1.10e-09;1!CL:0002252;1.10e-09;1!CL:0002170;1.10e-09;1!CL:0002327;3.03e-09;4!CL:0000312;8.97e-08;5!CL:0000622;1.74e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.01e-28,14;CL:0002076,1.37e-26,42;CL:0002621,4.10e-26,3;CL:0002368,8.95e-23,13;CL:0000244,3.33e-19,4;CL:0000731,3.33e-19,4;CL:0000223,1.05e-18,58;CL:0000317,1.88e-17,2;CL:1000448,1.88e-17,2;CL:0002308,1.88e-17,2;CL:0002140,1.88e-17,2;CL:0000066,1.80e-15,253;CL:0002202,3.44e-15,9;CL:0002632,3.44e-15,9;CL:0000362,3.98e-15,9;CL:0000240,2.51e-13,6;CL:0000311,2.51e-13,6;CL:0000079,2.51e-13,6;CL:0000237,2.51e-13,6;CL:0000036,2.51e-13,6;CL:0000357,2.51e-13,6;CL:0000114,2.51e-13,6;CL:0002328,2.69e-12,3;CL:0002166,3.19e-12,3;CL:0000068,4.22e-12,3;CL:0000069,4.22e-12,3;CL:0000307,4.22e-12,3;CL:0000377,4.22e-12,3;CL:0002077,2.77e-11,34;CL:0002251,2.04e-10,20;CL:0002336,8.91e-10,1;CL:0002261,8.91e-10,1;CL:0002170,8.91e-10,1;CL:0002252,1.36e-09,1;CL:0002327,2.57e-09,4;CL:0002321,1.05e-08,250;CL:0000312,9.44e-08,5;CL:0000622,1.61e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;2.61e-13;6!CL:0000114;2.61e-13;6!CL:0000377;3.67e-12;3!CL:0000223;3.02e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.42e-14!3;UBERON:0004815!3.30e-14!3;UBERON:0002031!3.30e-14!3;UBERON:0007196!5.64e-11!14;UBERON:0001558!5.64e-11!14;UBERON:0002185!9.05e-11!4;UBERON:0001708!9.66e-11!4;UBERON:0001704!9.66e-11!4;UBERON:0001911!1.18e-10!4;UBERON:0005333!1.18e-10!4;UBERON:0008425!1.18e-10!4;UBERON:0005311!1.18e-10!4;UBERON:0002419!5.42e-10!2;UBERON:0007771!5.42e-10!2;UBERON:0003297!5.42e-10!2;UBERON:0001821!5.42e-10!2;UBERON:0003487!5.42e-10!2;UBERON:0001820!5.42e-10!2;UBERON:0005089!5.42e-10!2;UBERON:0005088!5.42e-10!2;UBERON:0004119!4.17e-09!169;UBERON:0000925!4.17e-09!169;UBERON:0006595!4.17e-09!169;UBERON:0000365!1.09e-08!5;UBERON:0003102!4.06e-08!95;UBERON:0005153!5.43e-08!37;UBERON:0001003!9.26e-08!14;UBERON:0007376!9.26e-08!14;UBERON:0007383!9.26e-08!14;UBERON:0001004!1.25e-07!72;UBERON:0005910!2.65e-07!6;UBERON:0002090!2.71e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;5.06e-26;3!UBERON:0000486;1.10e-24;12!UBERON:0002419;2.31e-17;2!UBERON:0007771;2.31e-17;2!UBERON:0003297;2.31e-17;2!UBERON:0001821;2.31e-17;2!UBERON:0003487;2.31e-17;2!UBERON:0001820;2.31e-17;2!UBERON:0000365;1.53e-15;5!UBERON:0005910;4.78e-13;6!UBERON:0010371;1.18e-12;31!UBERON:0004815;2.69e-12;3!UBERON:0002031;2.69e-12;3!UBERON:0003929;1.71e-11;7!UBERON:0005911;3.57e-11;36!UBERON:0003729;1.31e-10;13!UBERON:0003350;4.04e-10;8!UBERON:0001828;4.04e-10;8!UBERON:0004807;1.66e-09;22!UBERON:0001708;1.92e-09;4!UBERON:0008895;1.92e-09;4!UBERON:0001911;3.03e-09;4!UBERON:0007196;3.29e-09;15!UBERON:0001558;3.29e-09;15!UBERON:0001003;3.87e-09;15!UBERON:0007376;3.87e-09;15!UBERON:0011159;1.01e-07;5!UBERON:0002185;1.01e-07;5!UBERON:0000344;6.12e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.10e-26,3;UBERON:0002419,1.88e-17,2;UBERON:0007771,1.88e-17,2;UBERON:0003297,1.88e-17,2;UBERON:0001821,1.88e-17,2;UBERON:0003487,1.88e-17,2;UBERON:0001820,1.88e-17,2;UBERON:0005089,1.88e-17,2;UBERON:0005088,1.88e-17,2;UBERON:0000365,1.74e-15,5;UBERON:0005910,5.30e-13,6;UBERON:0004815,2.69e-12,3;UBERON:0002031,2.69e-12,3;UBERON:0003729,1.16e-10,13;UBERON:0003350,3.74e-10,8;UBERON:0001828,3.74e-10,8;UBERON:0003102,4.17e-10,99;UBERON:0001708,2.17e-09,4;UBERON:0008895,2.17e-09,4;UBERON:0001911,2.57e-09,4;UBERON:0005333,2.57e-09,4;UBERON:0008425,2.57e-09,4;UBERON:0005311,2.57e-09,4;UBERON:0007196,3.48e-09,15;UBERON:0001558,3.48e-09,15;UBERON:0001003,3.79e-09,15;UBERON:0007376,3.79e-09,15;UBERON:0007383,3.79e-09,15;UBERON:0004119,5.30e-09,160;UBERON:0000925,5.30e-09,160;UBERON:0006595,5.30e-09,160;UBERON:0001004,6.74e-08,74;UBERON:0002185,1.01e-07,5;UBERON:0011159,1.12e-07,5;UBERON:0004807,1.93e-07,28;UBERON:0000344,5.65e-07,20;UBERON:0005911,6.03e-07,82 | |||
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|short_description=p@chr5:52627652..52627670,+ | |short_description=p@chr5:52627652..52627670,+ | ||
}} | }} |
Latest revision as of 15:11, 30 July 2015
Short description: | p@chr5:52627652..52627670, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:52627652..52627670, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data