FFCP PHASE1:Hg19::chr1:47695156..47695179,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6886 | |EntrezGene=6886 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11556 | |HGNC=11556 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000465912_5end | |association_with_transcript=-31bp_to_ENST00000465912_5end | ||
|cluster_id=chr1:47695156..47695179,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_10_at_TAL1_5end | |description=CAGE_peak_10_at_TAL1_5end | ||
|id=chr1:47695156..47695179,- | |id=chr1:47695156..47695179,- | ||
|ontology_enrichment_celltype=CL:0002139!7.93e-34!24;CL:0000115!6.18e-30!35;CL:0000071!4.05e-25!18;CL:0002546!4.05e-25!18;CL:0002078!1.35e-23!44;CL:0000213!7.00e-15!57;CL:0000215!7.00e-15!57;CL:1000413!1.74e-11!9;CL:0002543!1.63e-10!6;CL:0005020!3.02e-10!6;CL:0002138!3.02e-10!6;CL:0005022!3.02e-10!6;CL:0002274!2.41e-09!5;CL:0000457!2.41e-09!5;CL:0002191!2.41e-09!5;CL:0000097!2.41e-09!5;CL:0000831!2.41e-09!5;CL:0002028!2.41e-09!5;CL:0002544!3.36e-07!6 | |ontology_enrichment_celltype=CL:0002139!7.93e-34!24;CL:0000115!6.18e-30!35;CL:0000071!4.05e-25!18;CL:0002546!4.05e-25!18;CL:0002078!1.35e-23!44;CL:0000213!7.00e-15!57;CL:0000215!7.00e-15!57;CL:1000413!1.74e-11!9;CL:0002543!1.63e-10!6;CL:0005020!3.02e-10!6;CL:0002138!3.02e-10!6;CL:0005022!3.02e-10!6;CL:0002274!2.41e-09!5;CL:0000457!2.41e-09!5;CL:0002191!2.41e-09!5;CL:0000097!2.41e-09!5;CL:0000831!2.41e-09!5;CL:0002028!2.41e-09!5;CL:0002544!3.36e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.86e-29;24!CL:0000115;3.55e-23;36!CL:0000071;4.51e-21;18!CL:0000097;2.93e-20;5!CL:0002144;6.77e-20;3!CL:0002078;6.57e-19;45!CL:0000764;1.81e-14;2!CL:0000558;1.81e-14;2!CL:0000163;2.44e-11;9!CL:0000213;2.53e-11;58!CL:0000215;2.53e-11;58!CL:0002138;5.13e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.66e-31,36;CL:0002139,1.60e-29,24;CL:0002078,2.24e-24,45;CL:0000071,3.45e-21,18;CL:0002546,3.45e-21,18;CL:0000097,3.02e-20,5;CL:0002028,3.02e-20,5;CL:0002144,4.94e-20,3;CL:0000213,2.74e-18,58;CL:0000215,2.74e-18,58;CL:0000764,1.82e-14,2;CL:0000765,1.82e-14,2;CL:0000050,1.82e-14,2;CL:0000038,1.82e-14,2;CL:0000558,1.82e-14,2;CL:0000547,1.82e-14,2;CL:0000549,1.82e-14,2;CL:0000550,1.82e-14,2;CL:0000552,1.82e-14,2;CL:0000163,2.48e-11,9;CL:0005020,5.91e-10,6;CL:0002138,5.91e-10,6;CL:0005022,5.91e-10,6;CL:0000222,2.39e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;4.51e-21;18!CL:0005022;5.13e-10;6 | |||
|ontology_enrichment_disease=DOID:1036!9.66e-10!8 | |ontology_enrichment_disease=DOID:1036!9.66e-10!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;8.50e-13;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.23e-12,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.10e-26!115;UBERON:0001986!4.05e-25!18;UBERON:0004638!4.05e-25!18;UBERON:0004852!4.05e-25!18;UBERON:0000487!1.63e-19!22;UBERON:0006914!1.67e-16!25;UBERON:0004111!3.38e-14!241;UBERON:0000025!2.71e-13!194;UBERON:0000477!3.64e-12!286;UBERON:0001049!1.59e-11!57;UBERON:0005068!1.59e-11!57;UBERON:0006241!1.59e-11!57;UBERON:0007135!1.59e-11!57;UBERON:0000055!1.59e-11!69;UBERON:0003915!1.74e-11!9;UBERON:0004700!1.74e-11!9;UBERON:0001917!1.74e-11!9;UBERON:0002049!4.70e-09!79;UBERON:0007798!4.70e-09!79;UBERON:0002616!6.76e-09!59;UBERON:0002780!1.86e-08!41;UBERON:0001890!1.86e-08!41;UBERON:0006240!1.86e-08!41;UBERON:0001009!3.46e-08!113;UBERON:0003080!3.81e-08!42;UBERON:0004535!4.92e-08!110;UBERON:0003075!7.11e-08!86;UBERON:0007284!7.11e-08!86;UBERON:0001981!8.50e-08!60;UBERON:0007500!8.50e-08!60;UBERON:0004537!8.50e-08!60;UBERON:0006965!8.50e-08!60;UBERON:0001893!1.36e-07!34;UBERON:0002020!1.56e-07!34;UBERON:0003528!1.56e-07!34;UBERON:0002619!1.83e-07!22;UBERON:0001473!2.05e-07!8;UBERON:0004536!2.05e-07!8;UBERON:0006558!2.05e-07!8;UBERON:0002465!2.32e-07!10;UBERON:0002346!3.34e-07!90;UBERON:0001017!4.55e-07!82;UBERON:0005743!4.81e-07!86;UBERON:0002791!6.00e-07!33;UBERON:0000483!7.15e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.51e-21;18!UBERON:0001986;4.51e-21;18!UBERON:0004852;4.51e-21;18!UBERON:0010523;6.77e-20;3!UBERON:0001915;6.77e-20;3!UBERON:0001982;6.77e-20;3!UBERON:0000487;4.89e-17;22!UBERON:0006914;7.41e-15;25!UBERON:0000490;8.01e-11;33!UBERON:0001473;1.26e-07;8!UBERON:0004536;1.26e-07;8!UBERON:0006558;1.26e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.45e-21,18;UBERON:0001986,3.45e-21,18;UBERON:0004852,3.45e-21,18;UBERON:0010523,4.94e-20,3;UBERON:0001915,4.94e-20,3;UBERON:0001982,4.94e-20,3;UBERON:0000487,3.94e-17,22;UBERON:0006914,6.14e-15,25;UBERON:0000055,6.06e-11,68;UBERON:0002049,2.96e-09,78;UBERON:0007798,2.96e-09,78;UBERON:0004535,1.93e-08,109;UBERON:0001009,3.84e-08,112;UBERON:0001473,1.40e-07,8;UBERON:0004536,1.40e-07,8;UBERON:0006558,1.40e-07,8;UBERON:0007500,3.71e-07,59;UBERON:0001981,3.71e-07,59;UBERON:0004537,3.71e-07,59;UBERON:0006965,3.71e-07,59 | |||
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| ||
|short_description=p10@TAL1 | |short_description=p10@TAL1 | ||
}} | }} |
Latest revision as of 09:52, 18 September 2015
Short description: | p10@TAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TAL1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -31bp_to_ENST00000465912_5end |
EntrezGene: | TAL1 |
HGNC: | 11556 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.66e-31 | 36 |
endothelial cell of vascular tree | 1.60e-29 | 24 |
meso-epithelial cell | 2.24e-24 | 45 |
blood vessel endothelial cell | 3.45e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.45e-21 | 18 |
mast cell | 3.02e-20 | 5 |
basophil mast progenitor cell | 3.02e-20 | 5 |
capillary endothelial cell | 4.94e-20 | 3 |
lining cell | 2.74e-18 | 58 |
barrier cell | 2.74e-18 | 58 |
erythroid lineage cell | 1.82e-14 | 2 |
erythroblast | 1.82e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 1.82e-14 | 2 |
erythroid progenitor cell | 1.82e-14 | 2 |
reticulocyte | 1.82e-14 | 2 |
proerythroblast | 1.82e-14 | 2 |
basophilic erythroblast | 1.82e-14 | 2 |
polychromatophilic erythroblast | 1.82e-14 | 2 |
orthochromatic erythroblast | 1.82e-14 | 2 |
endocrine cell | 2.48e-11 | 9 |
lymphangioblast | 5.91e-10 | 6 |
endothelial cell of lymphatic vessel | 5.91e-10 | 6 |
vascular lymphangioblast | 5.91e-10 | 6 |
mesodermal cell | 2.39e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.45e-21 | 18 |
endothelium | 3.45e-21 | 18 |
cardiovascular system endothelium | 3.45e-21 | 18 |
microcirculatory vessel | 4.94e-20 | 3 |
endothelium of capillary | 4.94e-20 | 3 |
capillary | 4.94e-20 | 3 |
simple squamous epithelium | 3.94e-17 | 22 |
squamous epithelium | 6.14e-15 | 25 |
vessel | 6.06e-11 | 68 |
vasculature | 2.96e-09 | 78 |
vascular system | 2.96e-09 | 78 |
cardiovascular system | 1.93e-08 | 109 |
circulatory system | 3.84e-08 | 112 |
lymphatic vessel | 1.40e-07 | 8 |
lymph vasculature | 1.40e-07 | 8 |
lymphatic part of lymphoid system | 1.40e-07 | 8 |
epithelial tube open at both ends | 3.71e-07 | 59 |
blood vessel | 3.71e-07 | 59 |
blood vasculature | 3.71e-07 | 59 |
vascular cord | 3.71e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.23e-12 | 8 |