FFCP PHASE1:Hg19::chr6:106534230..106534254,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=639 | |EntrezGene=639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9346 | |HGNC=9346 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6S3 | |UniProt=F5H6S3 | ||
|association_with_transcript=-6bp_to_ENST00000456278_5end | |association_with_transcript=-6bp_to_ENST00000456278_5end | ||
|cluster_id=chr6:106534230..106534254,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_2_at_PRDM1_5end | |description=CAGE_peak_2_at_PRDM1_5end | ||
|id=chr6:106534230..106534254,+ | |id=chr6:106534230..106534254,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.24e-35!140;CL:0002087!5.04e-31!119;CL:0002031!2.89e-25!124;CL:0002057!1.32e-24!42;CL:0000860!6.63e-24!45;CL:0000037!2.52e-23!172;CL:0000566!2.52e-23!172;CL:0002009!3.57e-23!65;CL:0000766!3.23e-22!76;CL:0002194!5.69e-22!63;CL:0000576!5.69e-22!63;CL:0000040!5.69e-22!63;CL:0000559!5.69e-22!63;CL:0002032!9.09e-22!165;CL:0000837!9.09e-22!165;CL:0000988!1.52e-21!182;CL:0000557!1.69e-19!71;CL:0000839!3.05e-16!70;CL:0000763!3.45e-13!112;CL:0000049!3.45e-13!112;CL:0000542!1.37e-08!53;CL:0000051!1.37e-08!53;CL:0000838!2.16e-08!52 | |ontology_enrichment_celltype=CL:0000738!4.24e-35!140;CL:0002087!5.04e-31!119;CL:0002031!2.89e-25!124;CL:0002057!1.32e-24!42;CL:0000860!6.63e-24!45;CL:0000037!2.52e-23!172;CL:0000566!2.52e-23!172;CL:0002009!3.57e-23!65;CL:0000766!3.23e-22!76;CL:0002194!5.69e-22!63;CL:0000576!5.69e-22!63;CL:0000040!5.69e-22!63;CL:0000559!5.69e-22!63;CL:0002032!9.09e-22!165;CL:0000837!9.09e-22!165;CL:0000988!1.52e-21!182;CL:0000557!1.69e-19!71;CL:0000839!3.05e-16!70;CL:0000763!3.45e-13!112;CL:0000049!3.45e-13!112;CL:0000542!1.37e-08!53;CL:0000051!1.37e-08!53;CL:0000838!2.16e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.56e-21;33!CL:0002057;1.56e-21;33!CL:0000473;3.85e-18;39!CL:0000234;3.85e-18;39!CL:0000576;1.21e-15;48!CL:0000766;1.10e-10;69!CL:0002087;1.16e-10;104!CL:0000738;2.37e-08;136!CL:0000451;5.30e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.60e-38,136;CL:0002087,1.79e-33,115;CL:0002031,8.50e-28,120;CL:0000473,1.24e-26,48;CL:0000234,1.24e-26,48;CL:0000860,2.52e-26,42;CL:0002057,2.52e-26,42;CL:0000037,3.51e-26,168;CL:0002009,2.04e-25,61;CL:0000988,1.42e-24,177;CL:0000766,1.70e-24,72;CL:0002032,2.53e-24,161;CL:0000837,2.53e-24,161;CL:0002194,4.20e-24,59;CL:0000576,4.20e-24,59;CL:0000040,4.20e-24,59;CL:0000559,4.20e-24,59;CL:0000557,1.60e-21,67;CL:0000839,2.81e-18,66;CL:0000763,4.88e-15,108;CL:0000049,4.88e-15,108;CL:0000542,4.31e-09,53;CL:0000051,4.31e-09,53;CL:0000838,7.02e-09,52;CL:0000451,6.69e-07,10;CL:0000134,9.03e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.39e-26!102;UBERON:0003061!6.39e-26!102;UBERON:0002193!3.17e-24!112;UBERON:0002371!8.86e-18!80;UBERON:0001474!2.40e-15!86;UBERON:0002405!1.35e-13!115;UBERON:0004765!5.29e-13!101;UBERON:0001434!5.29e-13!101;UBERON:0003081!4.68e-10!216;UBERON:0000178!7.15e-08!15;UBERON:0000179!7.15e-08!15;UBERON:0000463!7.15e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.41e-08;15!UBERON:0000179;2.41e-08;15!UBERON:0000463;2.41e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.11e-28,98;UBERON:0003061,1.11e-28,98;UBERON:0002193,2.05e-26,108;UBERON:0002371,8.04e-20,76;UBERON:0002405,1.25e-19,93;UBERON:0001474,2.54e-17,82;UBERON:0004765,1.14e-14,90;UBERON:0003081,2.04e-13,203;UBERON:0001434,2.39e-12,100;UBERON:0000178,2.42e-08,15;UBERON:0000179,2.42e-08,15;UBERON:0000463,2.42e-08,15 | |||
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|short_description=p2@PRDM1 | |short_description=p2@PRDM1 | ||
}} | }} |
Latest revision as of 14:58, 19 September 2015
Short description: | p2@PRDM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRDM1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -6bp_to_ENST00000456278_5end |
EntrezGene: | PRDM1 |
HGNC: | 9346 |
UniProt: | F5H6S3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.60e-38 | 136 |
nongranular leukocyte | 1.79e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 8.50e-28 | 120 |
defensive cell | 1.24e-26 | 48 |
phagocyte | 1.24e-26 | 48 |
classical monocyte | 2.52e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.52e-26 | 42 |
hematopoietic stem cell | 3.51e-26 | 168 |
macrophage dendritic cell progenitor | 2.04e-25 | 61 |
hematopoietic cell | 1.42e-24 | 177 |
myeloid leukocyte | 1.70e-24 | 72 |
hematopoietic oligopotent progenitor cell | 2.53e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.53e-24 | 161 |
monopoietic cell | 4.20e-24 | 59 |
monocyte | 4.20e-24 | 59 |
monoblast | 4.20e-24 | 59 |
promonocyte | 4.20e-24 | 59 |
granulocyte monocyte progenitor cell | 1.60e-21 | 67 |
myeloid lineage restricted progenitor cell | 2.81e-18 | 66 |
myeloid cell | 4.88e-15 | 108 |
common myeloid progenitor | 4.88e-15 | 108 |
lymphocyte | 4.31e-09 | 53 |
common lymphoid progenitor | 4.31e-09 | 53 |
lymphoid lineage restricted progenitor cell | 7.02e-09 | 52 |
dendritic cell | 6.69e-07 | 10 |
mesenchymal cell | 9.03e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.11e-28 | 98 |
blood island | 1.11e-28 | 98 |
hemolymphoid system | 2.05e-26 | 108 |
bone marrow | 8.04e-20 | 76 |
immune system | 1.25e-19 | 93 |
bone element | 2.54e-17 | 82 |
skeletal element | 1.14e-14 | 90 |
lateral plate mesoderm | 2.04e-13 | 203 |
skeletal system | 2.39e-12 | 100 |
blood | 2.42e-08 | 15 |
haemolymphatic fluid | 2.42e-08 | 15 |
organism substance | 2.42e-08 | 15 |