FFCP PHASE1:Hg19::chr6:108145556..108145565,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=256380 | |EntrezGene=256380 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21397 | |HGNC=21397 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N228 | |UniProt=Q8N228 | ||
|association_with_transcript=-35bp_to_ENST00000369022,NM_198081,uc003prz.3,uc010kdf.2,uc011eam.1_5end | |association_with_transcript=-35bp_to_ENST00000369022,NM_198081,uc003prz.3,uc010kdf.2,uc011eam.1_5end | ||
|cluster_id=chr6:108145556..108145565,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_6_at_SCML4_5end | |description=CAGE_peak_6_at_SCML4_5end | ||
|id=chr6:108145556..108145565,- | |id=chr6:108145556..108145565,- | ||
|ontology_enrichment_celltype=CL:0000838!5.51e-39!52;CL:0000542!4.62e-38!53;CL:0000051!4.62e-38!53;CL:0000791!9.17e-36!18;CL:0000789!9.17e-36!18;CL:0002420!9.17e-36!18;CL:0002419!9.17e-36!18;CL:0000790!9.17e-36!18;CL:0000084!2.57e-24!25;CL:0000827!2.57e-24!25;CL:0000625!8.01e-21!11;CL:0000738!4.45e-20!140;CL:0002087!4.31e-19!119;CL:0000037!6.56e-16!172;CL:0000566!6.56e-16!172;CL:0000236!1.19e-15!14;CL:0002031!1.67e-15!124;CL:0000624!6.80e-15!6;CL:0000988!2.25e-14!182;CL:0002032!3.76e-14!165;CL:0000837!3.76e-14!165;CL:0000945!1.67e-11!24;CL:0000826!1.67e-11!24;CL:0000898!1.87e-08!3;CL:0000623!6.13e-08!3;CL:0000825!6.13e-08!3;CL:0000842!1.72e-07!3 | |ontology_enrichment_celltype=CL:0000838!5.51e-39!52;CL:0000542!4.62e-38!53;CL:0000051!4.62e-38!53;CL:0000791!9.17e-36!18;CL:0000789!9.17e-36!18;CL:0002420!9.17e-36!18;CL:0002419!9.17e-36!18;CL:0000790!9.17e-36!18;CL:0000084!2.57e-24!25;CL:0000827!2.57e-24!25;CL:0000625!8.01e-21!11;CL:0000738!4.45e-20!140;CL:0002087!4.31e-19!119;CL:0000037!6.56e-16!172;CL:0000566!6.56e-16!172;CL:0000236!1.19e-15!14;CL:0002031!1.67e-15!124;CL:0000624!6.80e-15!6;CL:0000988!2.25e-14!182;CL:0002032!3.76e-14!165;CL:0000837!3.76e-14!165;CL:0000945!1.67e-11!24;CL:0000826!1.67e-11!24;CL:0000898!1.87e-08!3;CL:0000623!6.13e-08!3;CL:0000825!6.13e-08!3;CL:0000842!1.72e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.23e-59;18!CL:0000789;2.23e-59;18!CL:0002419;2.23e-59;18!CL:0000084;7.79e-42;25!CL:0000625;3.34e-35;11!CL:0000624;4.80e-30;6!CL:0000542;1.07e-29;53!CL:0000236;1.41e-18;13!CL:0000898;2.18e-16;3!CL:0000815;2.84e-11;2!CL:0000792;2.84e-11;2!CL:0002677;2.84e-11;2!CL:0000945;1.23e-09;24!CL:0002087;1.50e-07;104!CL:0000623;1.57e-07;3!CL:0000895;8.10e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.48e-60,18;CL:0000789,9.48e-60,18;CL:0002420,9.48e-60,18;CL:0002419,9.48e-60,18;CL:0000790,9.48e-60,18;CL:0000838,1.02e-50,52;CL:0000542,1.17e-49,53;CL:0000051,1.17e-49,53;CL:0000084,4.24e-42,25;CL:0000827,4.24e-42,25;CL:0000625,1.53e-35,11;CL:0000624,4.51e-30,6;CL:0002087,1.26e-21,115;CL:0000738,6.02e-21,136;CL:0002031,1.02e-18,120;CL:0000236,3.87e-17,14;CL:0000898,2.78e-16,3;CL:0000037,7.36e-16,168;CL:0002032,2.23e-15,161;CL:0000837,2.23e-15,161;CL:0000988,9.26e-15,177;CL:0000815,3.33e-11,2;CL:0000792,3.33e-11,2;CL:0002677,3.33e-11,2;CL:0000945,1.31e-09,24;CL:0000826,1.31e-09,24;CL:0000623,1.21e-07,3;CL:0000825,1.21e-07,3;CL:0000810,8.81e-07,1;CL:0000895,8.81e-07,1;CL:0002436,8.81e-07,1;CL:0002427,8.81e-07,1;CL:0002428,8.81e-07,1;CL:0002429,8.81e-07,1;CL:0002433,8.81e-07,1;CL:0002431,8.81e-07,1;CL:0002432,8.81e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.23e-59;18!CL:0000051;1.07e-29;53!CL:0002427;8.10e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.37e-13!15;UBERON:0000179!4.37e-13!15;UBERON:0000463!4.37e-13!15;UBERON:0004177!5.07e-11!7;UBERON:0002370!9.36e-10!4;UBERON:0005058!9.36e-10!4;UBERON:0009113!9.36e-10!4;UBERON:0003295!9.36e-10!4;UBERON:0005562!9.36e-10!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@SCML4 | |short_description=p6@SCML4 | ||
}} | }} |
Latest revision as of 16:54, 19 September 2015
Short description: | p6@SCML4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCML4_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -35bp_to_ENST00000369022, NM_198081, uc003prz.3, uc010kdf.2, uc011eam.1_5end |
EntrezGene: | SCML4 |
HGNC: | 21397 |
UniProt: | Q8N228 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data