FFCP PHASE1:Hg19::chr6:123760815..123760834,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000427828,ENST00000434768_5end | |association_with_transcript=28bp_to_ENST00000427828,ENST00000434768_5end | ||
|cluster_id=chr6:123760815..123760834,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_ENST00000427828_5end,CAGE_peak_1_at_ENST00000434768_5end | |description=CAGE_peak_1_at_ENST00000427828_5end,CAGE_peak_1_at_ENST00000434768_5end | ||
|id=chr6:123760815..123760834,+ | |id=chr6:123760815..123760834,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.67e-41;4!UBERON:0007284;8.67e-41;4!UBERON:0010226;8.95e-20;1!UBERON:0004140;1.56e-19;1!UBERON:0010227;2.25e-19;1!UBERON:0000358;2.71e-19;1!UBERON:0006603;3.17e-08;65 | |||
|ontology_enrichment_disease=DOID:114!1.15e-24!2;DOID:178!3.76e-13!1;DOID:326!3.76e-13!1;DOID:3978!3.76e-13!1;DOID:3394!3.76e-13!1;DOID:5844!3.76e-13!1;DOID:1287!7.70e-13!4 | |||
|ontology_enrichment_disease_v019=DOID:114;8.20e-37;2!DOID:178;3.25e-19;1!DOID:326;3.25e-19;1!DOID:3978;3.25e-19;1!DOID:3394;3.25e-19;1!DOID:5844;3.25e-19;1!DOID:1287;5.64e-19;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.20e-37,2;DOID:178,3.25e-19,1;DOID:326,3.25e-19,1;DOID:3978,3.25e-19,1;DOID:3394,3.25e-19,1;DOID:5844,3.25e-19,1;DOID:1287,5.64e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!3.36e-36!3;UBERON:0003978!6.10e-36!3;UBERON:0009751!6.10e-36!3;UBERON:0000946!6.10e-36!3;UBERON:0002523!6.10e-36!3;UBERON:0005983!6.10e-36!3;UBERON:0002165!6.10e-36!3;UBERON:0002062!6.10e-36!3;UBERON:0007280!6.10e-36!3;UBERON:0007100!1.49e-34!27;UBERON:0002081!1.64e-24!2;UBERON:0002133!2.34e-24!2;UBERON:0000948!1.63e-17!24;UBERON:0005498!1.63e-17!24;UBERON:0004140!1.63e-17!24;UBERON:0009881!1.63e-17!24;UBERON:0004141!1.63e-17!24;UBERON:0003084!1.63e-17!24;UBERON:0007005!1.63e-17!24;UBERON:0004139!1.63e-17!24;UBERON:0004291!1.63e-17!24;UBERON:0003103!6.19e-16!69;UBERON:0002084!1.61e-13!1;UBERON:0002082!1.61e-13!1;UBERON:0004706!1.61e-13!1;UBERON:0002146!2.06e-13!1;UBERON:0005623!2.06e-13!1;UBERON:0002079!2.95e-13!1;UBERON:0002135!4.23e-13!1;UBERON:0002134!4.77e-13!1;UBERON:0005208!4.77e-13!1;UBERON:0005946!4.77e-13!1;UBERON:0005965!4.77e-13!1;UBERON:0002078!4.77e-13!1;UBERON:0007029!5.38e-13!1;UBERON:0007023!5.67e-09!115;UBERON:0002342!3.50e-08!14;UBERON:0005062!3.50e-08!14;UBERON:0001009!1.90e-07!113;UBERON:0003127!4.17e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.17e-57;25!UBERON:0004151;1.81e-54;3!UBERON:0003978;4.51e-54;3!UBERON:0000946;4.51e-54;3!UBERON:0002081;1.42e-36;2!UBERON:0002133;2.45e-36;2!UBERON:0000948;2.27e-29;22!UBERON:0002084;8.95e-20;1!UBERON:0002082;8.95e-20;1!UBERON:0002146;1.30e-19;1!UBERON:0005623;1.30e-19;1!UBERON:0002079;2.25e-19;1!UBERON:0002135;3.91e-19;1!UBERON:0002134;4.69e-19;1!UBERON:0005208;4.69e-19;1!UBERON:0004145;4.69e-19;1!UBERON:0005946;4.69e-19;1!UBERON:0005965;4.69e-19;1!UBERON:0002078;4.69e-19;1!UBERON:0007029;5.62e-19;1!UBERON:0010313;8.57e-17;10!UBERON:0003103;9.60e-12;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.81e-54,3;UBERON:0003978,4.51e-54,3;UBERON:0009751,4.51e-54,3;UBERON:0000946,4.51e-54,3;UBERON:0002523,4.51e-54,3;UBERON:0005983,4.51e-54,3;UBERON:0002165,4.51e-54,3;UBERON:0002062,4.51e-54,3;UBERON:0007280,4.51e-54,3;UBERON:0007100,2.27e-53,27;UBERON:0002081,1.42e-36,2;UBERON:0010227,1.42e-36,2;UBERON:0002133,2.45e-36,2;UBERON:0000948,6.31e-27,24;UBERON:0005498,6.31e-27,24;UBERON:0004140,6.31e-27,24;UBERON:0009881,6.31e-27,24;UBERON:0004141,6.31e-27,24;UBERON:0003084,6.31e-27,24;UBERON:0007005,6.31e-27,24;UBERON:0004139,6.31e-27,24;UBERON:0004291,6.31e-27,24;UBERON:0004797,1.14e-23,7;UBERON:0003103,5.72e-21,68;UBERON:0002084,8.95e-20,1;UBERON:0002082,8.95e-20,1;UBERON:0010226,8.95e-20,1;UBERON:0002146,1.30e-19,1;UBERON:0005623,1.30e-19,1;UBERON:0002079,2.25e-19,1;UBERON:0002135,3.91e-19,1;UBERON:0002134,4.69e-19,1;UBERON:0005208,4.69e-19,1;UBERON:0005946,4.69e-19,1;UBERON:0005965,4.69e-19,1;UBERON:0002078,4.69e-19,1;UBERON:0007029,5.62e-19,1;UBERON:0010313,8.57e-17,10;UBERON:0002342,8.57e-17,10;UBERON:0005062,8.57e-17,10;UBERON:0001009,1.60e-12,112;UBERON:0007023,1.10e-09,114;UBERON:0004872,1.06e-07,83;UBERON:0004145,3.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81990723562312,46.2904056503601,2.87149209830726,12.5797770314364,34.3380838509257,79.6722103067485,36.6149925052658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0086018538407,90.7065999400641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,14.0784565442073,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81990723562312,46.2904056503601,2.87149209830726,12.5797770314364,34.3380838509257,79.6722103067485,36.6149925052658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0086018538407,90.7065999400641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,14.0784565442073,0,0,0,0,0 | ||
|short_description=p1@ENST00000427828,p1@ENST00000434768 | |short_description=p1@ENST00000427828,p1@ENST00000434768 | ||
}} | }} |
Latest revision as of 19:01, 30 July 2015
Short description: | p1@ENST00000427828, p1@ENST00000434768 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000427828_5end, CAGE_peak_1_at_ENST00000434768_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 28bp_to_ENST00000427828, ENST00000434768_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 8.20e-37 | 2 |
vascular disease | 3.25e-19 | 1 |
ischemia | 3.25e-19 | 1 |
extrinsic cardiomyopathy | 3.25e-19 | 1 |
myocardial ischemia | 3.25e-19 | 1 |
myocardial infarction | 3.25e-19 | 1 |
cardiovascular system disease | 5.64e-19 | 4 |