FFCP PHASE1:Hg19::chr6:143999072..143999170,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9749 | |EntrezGene=9749 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20956 | |HGNC=20956 | ||
|TSSclassifier=strong | |||
|UniProt=O75167,C9J572 | |UniProt=O75167,C9J572 | ||
|association_with_transcript=0bp_to_ENST00000367582,ENST00000402863,ENST00000440869,ENST00000451827,NM_001100164,NM_001100165,uc003qjr.3,uc010khi.2_5end | |association_with_transcript=0bp_to_ENST00000367582,ENST00000402863,ENST00000440869,ENST00000451827,NM_001100164,NM_001100165,uc003qjr.3,uc010khi.2_5end | ||
|cluster_id=chr6:143999072..143999170,+ | |||
|description=CAGE_peak_1_at_PHACTR2_5end | |description=CAGE_peak_1_at_PHACTR2_5end | ||
|id=chr6:143999072..143999170,+ | |id=chr6:143999072..143999170,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.60e-10!24;CL:0000115!7.20e-09!35;CL:0000222!2.41e-08!119;CL:0000071!3.22e-08!18;CL:0002546!3.22e-08!18;CL:0002078!2.56e-07!44 | |ontology_enrichment_celltype=CL:0002139!1.60e-10!24;CL:0000115!7.20e-09!35;CL:0000222!2.41e-08!119;CL:0000071!3.22e-08!18;CL:0002546!3.22e-08!18;CL:0002078!2.56e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.89e-10;24!CL:0000071;3.67e-08;18!CL:0000115;1.30e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.60e-10,24;CL:0000115,5.42e-09,36;CL:0000222,2.06e-08,121;CL:0000071,3.21e-08,18;CL:0002546,3.21e-08,18;CL:0002078,1.88e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;3.67e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!8.01e-17!84;UBERON:0002049!2.39e-15!79;UBERON:0007798!2.39e-15!79;UBERON:0000468!3.78e-14!659;UBERON:0001009!1.08e-12!113;UBERON:0000055!2.00e-12!69;UBERON:0001981!2.99e-12!60;UBERON:0007500!2.99e-12!60;UBERON:0004537!2.99e-12!60;UBERON:0006965!2.99e-12!60;UBERON:0004535!1.07e-11!110;UBERON:0000490!3.83e-11!138;UBERON:0003914!4.13e-11!118;UBERON:0000467!1.00e-09!625;UBERON:0000926!1.39e-09!448;UBERON:0004120!1.39e-09!448;UBERON:0006603!1.39e-09!448;UBERON:0000480!1.72e-09!626;UBERON:0007100!1.65e-08!27;UBERON:0001986!3.22e-08!18;UBERON:0004638!3.22e-08!18;UBERON:0004852!3.22e-08!18;UBERON:0006914!1.41e-07!25;UBERON:0000948!2.61e-07!24;UBERON:0005498!2.61e-07!24;UBERON:0004140!2.61e-07!24;UBERON:0009881!2.61e-07!24;UBERON:0004141!2.61e-07!24;UBERON:0003084!2.61e-07!24;UBERON:0007005!2.61e-07!24;UBERON:0004139!2.61e-07!24;UBERON:0004291!2.61e-07!24;UBERON:0000477!3.67e-07!286;UBERON:0000922!4.32e-07!612;UBERON:0000487!4.52e-07!22;UBERON:0001637!6.51e-07!42;UBERON:0003509!6.51e-07!42;UBERON:0004572!6.51e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.64e-08;25!UBERON:0004638;3.67e-08;18!UBERON:0001986;3.67e-08;18!UBERON:0004852;3.67e-08;18!UBERON:0006914;1.69e-07;25!UBERON:0000948;2.76e-07;22!UBERON:0000487;5.49e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.58e-16,83;UBERON:0002049,7.79e-15,78;UBERON:0007798,7.79e-15,78;UBERON:0001009,2.89e-12,112;UBERON:0000055,6.19e-12,68;UBERON:0007500,9.60e-12,59;UBERON:0001981,9.60e-12,59;UBERON:0004537,9.60e-12,59;UBERON:0006965,9.60e-12,59;UBERON:0004535,2.79e-11,109;UBERON:0003914,3.39e-11,117;UBERON:0000490,3.17e-10,148;UBERON:0000926,1.67e-09,315;UBERON:0004120,1.67e-09,315;UBERON:0006603,1.67e-09,315;UBERON:0007100,1.64e-08,27;UBERON:0004638,3.21e-08,18;UBERON:0001986,3.21e-08,18;UBERON:0004852,3.21e-08,18;UBERON:0006914,1.40e-07,25;UBERON:0000948,2.60e-07,24;UBERON:0005498,2.60e-07,24;UBERON:0004140,2.60e-07,24;UBERON:0009881,2.60e-07,24;UBERON:0004141,2.60e-07,24;UBERON:0003084,2.60e-07,24;UBERON:0007005,2.60e-07,24;UBERON:0004139,2.60e-07,24;UBERON:0004291,2.60e-07,24;UBERON:0003104,2.94e-07,160;UBERON:0009142,2.94e-07,160;UBERON:0000487,4.51e-07,22;UBERON:0002050,6.26e-07,564;UBERON:0001637,6.49e-07,42;UBERON:0003509,6.49e-07,42;UBERON:0004572,6.49e-07,42;UBERON:0005256,7.52e-07,122 | |||
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| ||
|short_description=p1@PHACTR2 | |short_description=p1@PHACTR2 | ||
}} | }} |
Latest revision as of 20:37, 15 September 2015
Short description: | p1@PHACTR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHACTR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000367582, ENST00000402863, ENST00000440869, ENST00000451827, NM_001100164, NM_001100165, uc003qjr.3, uc010khi.2_5end |
EntrezGene: | PHACTR2 |
HGNC: | 20956 |
UniProt: | O75167C9J572 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.60e-10 | 24 |
endothelial cell | 5.42e-09 | 36 |
mesodermal cell | 2.06e-08 | 121 |
blood vessel endothelial cell | 3.21e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.21e-08 | 18 |
meso-epithelial cell | 1.88e-07 | 45 |