FFCP PHASE1:Hg19::chr13:29292935..29292947,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:29292935..29292947,-
|short_description=p3@SLC46A3
|description=CAGE_peak_3_at_SLC46A3_5end
|association_with_transcript=30bp_to_ENST00000266943_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283537 | |EntrezGene=283537 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27501 | |HGNC=27501 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z3Q1 | |UniProt=Q7Z3Q1 | ||
|association_with_transcript=30bp_to_ENST00000266943_5end | |||
|cluster_id=chr13:29292935..29292947,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_3_at_SLC46A3_5end | |||
|id=chr13:29292935..29292947,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.92e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.94e-08!115;UBERON:0002405!7.20e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.17e-20;2!UBERON:0002757;7.17e-20;2!UBERON:0010134;7.17e-20;2!UBERON:0005408;7.17e-20;2!UBERON:0001899;7.17e-20;2!UBERON:0000996;8.20e-11;1!UBERON:0007195;8.20e-11;1!UBERON:0003296;2.05e-10;4!UBERON:0010133;2.05e-10;4!UBERON:0002784;2.05e-10;4!UBERON:0002108;7.42e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.00e-19,2;UBERON:0002757,3.00e-19,2;UBERON:0010134,3.00e-19,2;UBERON:0005408,3.00e-19,2;UBERON:0001899,3.00e-19,2;UBERON:0000996,7.46e-11,1;UBERON:0007195,1.46e-10,1;UBERON:0003296,4.15e-10,4;UBERON:0010133,4.15e-10,4;UBERON:0002784,4.15e-10,4;UBERON:0002108,7.43e-09,4 | |||
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| ||
|short_description=p3@SLC46A3 | |||
}} | }} |
Latest revision as of 00:55, 17 September 2015
Short description: | p3@SLC46A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC46A3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 30bp_to_ENST00000266943_5end |
EntrezGene: | SLC46A3 |
HGNC: | 27501 |
UniProt: | Q7Z3Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.92e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.00e-19 | 2 |
regional part of epithalamus | 3.00e-19 | 2 |
secretory circumventricular organ | 3.00e-19 | 2 |
circumventricular organ | 3.00e-19 | 2 |
epithalamus | 3.00e-19 | 2 |
vagina | 7.46e-11 | 1 |
stroma of bone marrow | 1.46e-10 | 1 |
gland of diencephalon | 4.15e-10 | 4 |
neuroendocrine gland | 4.15e-10 | 4 |
regional part of diencephalon | 4.15e-10 | 4 |
small intestine | 7.43e-09 | 4 |