FFCP PHASE1:Hg19::chr13:30002890..30002905,+: Difference between revisions
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|id=chr13:30002890..30002905,+
|short_description=p4@MTUS2
|description=CAGE_peak_4_at_MTUS2_5end
|association_with_transcript=44bp_to_ENST00000542829_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23281 | |EntrezGene=23281 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20595 | |HGNC=20595 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=44bp_to_ENST00000542829_5end | |||
|cluster_id=chr13:30002890..30002905,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_4_at_MTUS2_5end | |||
|id=chr13:30002890..30002905,+ | |||
|ontology_enrichment_celltype=CL:0002150!3.99e-08!3;CL:0000861!3.99e-08!3;CL:0002504!4.93e-07!3;CL:1000279!4.93e-07!3;CL:1000280!4.93e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.72e-15;1!UBERON:0010226;6.22e-15;1!UBERON:0010227;9.36e-15;1!UBERON:0005062;2.18e-14;4!UBERON:0007284;2.18e-14;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;7.60e-28;2!DOID:178;1.15e-14;1!DOID:326;1.15e-14;1!DOID:3978;1.15e-14;1!DOID:3394;1.15e-14;1!DOID:5844;1.15e-14;1!DOID:1287;1.91e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.10e-28,2;DOID:178,1.07e-14,1;DOID:326,1.07e-14,1;DOID:3978,1.07e-14,1;DOID:3394,1.07e-14,1;DOID:5844,1.07e-14,1;DOID:1287,1.85e-14,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;1.28e-33;25!UBERON:0004151;6.06e-19;3!UBERON:0003978;7.59e-19;3!UBERON:0000946;7.59e-19;3!UBERON:0000948;2.60e-15;22!UBERON:0002084;6.22e-15;1!UBERON:0002082;6.22e-15;1!UBERON:0002146;7.13e-15;1!UBERON:0005623;7.13e-15;1!UBERON:0002079;9.36e-15;1!UBERON:0002135;1.15e-14;1!UBERON:0002081;5.01e-08;2!UBERON:0002133;5.55e-08;2!UBERON:0003103;7.45e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.39e-31,27;UBERON:0004151,6.06e-19,3;UBERON:0003978,7.94e-19,3;UBERON:0009751,7.94e-19,3;UBERON:0000946,7.94e-19,3;UBERON:0002523,7.94e-19,3;UBERON:0005983,7.94e-19,3;UBERON:0002165,7.94e-19,3;UBERON:0002062,7.94e-19,3;UBERON:0007280,7.94e-19,3;UBERON:0002084,6.22e-15,1;UBERON:0002082,6.22e-15,1;UBERON:0010226,6.22e-15,1;UBERON:0002146,7.13e-15,1;UBERON:0005623,7.13e-15,1;UBERON:0002079,9.36e-15,1;UBERON:0002135,1.23e-14,1;UBERON:0000948,4.97e-14,24;UBERON:0005498,4.97e-14,24;UBERON:0004140,4.97e-14,24;UBERON:0009881,4.97e-14,24;UBERON:0004141,4.97e-14,24;UBERON:0003084,4.97e-14,24;UBERON:0007005,4.97e-14,24;UBERON:0004139,4.97e-14,24;UBERON:0004291,4.97e-14,24;UBERON:0003103,6.42e-12,68;UBERON:0004797,1.32e-08,7;UBERON:0002081,5.02e-08,2;UBERON:0010227,5.02e-08,2;UBERON:0002133,5.74e-08,2;UBERON:0001009,6.47e-07,112 | |||
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| ||
|short_description=p4@MTUS2 | |||
}} | }} |
Latest revision as of 01:13, 17 September 2015
Short description: | p4@MTUS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MTUS2_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 44bp_to_ENST00000542829_5end |
EntrezGene: | MTUS2 |
HGNC: | 20595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 4.39e-31 | 27 |
cardiac chamber | 6.06e-19 | 3 |
valve | 7.94e-19 | 3 |
cardiac mesenchyme | 7.94e-19 | 3 |
cardial valve | 7.94e-19 | 3 |
tunica intima | 7.94e-19 | 3 |
heart layer | 7.94e-19 | 3 |
endocardium | 7.94e-19 | 3 |
endocardial cushion | 7.94e-19 | 3 |
presumptive endocardium | 7.94e-19 | 3 |
heart left ventricle | 6.22e-15 | 1 |
cardiac ventricle | 6.22e-15 | 1 |
future cardiac ventricle | 6.22e-15 | 1 |
pulmonary valve | 7.13e-15 | 1 |
semi-lunar valve | 7.13e-15 | 1 |
left cardiac atrium | 9.36e-15 | 1 |
mitral valve | 1.23e-14 | 1 |
heart | 4.97e-14 | 24 |
primitive heart tube | 4.97e-14 | 24 |
primary heart field | 4.97e-14 | 24 |
anterior lateral plate mesoderm | 4.97e-14 | 24 |
heart tube | 4.97e-14 | 24 |
heart primordium | 4.97e-14 | 24 |
cardiac mesoderm | 4.97e-14 | 24 |
cardiogenic plate | 4.97e-14 | 24 |
heart rudiment | 4.97e-14 | 24 |
compound organ | 6.42e-12 | 68 |
blood vessel layer | 1.32e-08 | 7 |
cardiac atrium | 5.02e-08 | 2 |
future cardiac atrium | 5.02e-08 | 2 |
atrioventricular valve | 5.74e-08 | 2 |
circulatory system | 6.47e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.10e-28 | 2 |
vascular disease | 1.07e-14 | 1 |
ischemia | 1.07e-14 | 1 |
extrinsic cardiomyopathy | 1.07e-14 | 1 |
myocardial ischemia | 1.07e-14 | 1 |
myocardial infarction | 1.07e-14 | 1 |
cardiovascular system disease | 1.85e-14 | 4 |