FFCP PHASE1:Hg19::chr7:27163592..27163605,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:27163592..27163605,- | |||
|coexpression_cluster_id=C4086 | |||
|description=CAGE_peak_at_chr7:27163592..27163605,- | |description=CAGE_peak_at_chr7:27163592..27163605,- | ||
|id=chr7:27163592..27163605,- | |id=chr7:27163592..27163605,- | ||
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|ontology_enrichment_celltype_v019=CL:0000322;7.02e-25;3!CL:0002595;1.05e-15;5!CL:0002593;1.57e-10;2!CL:0000650;2.99e-10;2!CL:1000500;2.99e-10;2!CL:1000618;2.99e-10;2!CL:1001318;2.99e-10;2!CL:0002173;2.99e-10;2!CL:0000359;1.09e-09;32!CL:0002202;5.87e-09;9!CL:0002632;5.87e-09;9!CL:0002539;3.25e-08;10!CL:0002582;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,7.93e-25,3;CL:0002595,1.05e-15,5;CL:0002593,1.57e-10,2;CL:0000650,3.58e-10,2;CL:1000500,3.58e-10,2;CL:1000618,3.58e-10,2;CL:1001318,3.58e-10,2;CL:0002173,3.58e-10,2;CL:0000359,1.76e-09,32;CL:0002202,6.11e-09,9;CL:0002632,6.11e-09,9;CL:0002539,3.25e-08,10;CL:0002582,2.63e-07,3;CL:0000192,4.02e-07,43;CL:0000514,4.02e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.36e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.99e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.27e-10,2 | |||
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|short_description=p@chr7:27163592..27163605,- | |short_description=p@chr7:27163592..27163605,- | ||
}} | }} |
Latest revision as of 09:01, 31 July 2015
Short description: | p@chr7:27163592..27163605, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:27163592..27163605, - |
Coexpression cluster: | C4086_Smooth_Mesothelial_seminal_Fibroblast_Alveolar_Melanocyte_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 7.93e-25 | 3 |
smooth muscle cell of the subclavian artery | 1.05e-15 | 5 |
smooth muscle cell of the internal thoracic artery | 1.57e-10 | 2 |
mesangial cell | 3.58e-10 | 2 |
kidney interstitial cell | 3.58e-10 | 2 |
juxtaglomerular complex cell | 3.58e-10 | 2 |
renal interstitial pericyte | 3.58e-10 | 2 |
extraglomerular mesangial cell | 3.58e-10 | 2 |
vascular associated smooth muscle cell | 1.76e-09 | 32 |
epithelial cell of tracheobronchial tree | 6.11e-09 | 9 |
epithelial cell of lower respiratory tract | 6.11e-09 | 9 |
aortic smooth muscle cell | 3.25e-08 | 10 |
visceral preadipocyte | 2.63e-07 | 3 |
smooth muscle cell | 4.02e-07 | 43 |
smooth muscle myoblast | 4.02e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.27e-10 | 2 |