FFCP PHASE1:Hg19::chr2:139259556..139259579,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339745 | |EntrezGene=339745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27934 | |HGNC=27934 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBB7 | |UniProt=F8WBB7 | ||
|association_with_transcript=54bp_to_ENST00000430968_5end | |association_with_transcript=54bp_to_ENST00000430968_5end | ||
|cluster_id=chr2:139259556..139259579,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_SPOPL_5end | |description=CAGE_peak_3_at_SPOPL_5end | ||
|id=chr2:139259556..139259579,+ | |id=chr2:139259556..139259579,+ | ||
|ontology_enrichment_celltype=CL:0000766!8.83e-25!76;CL:0000763!2.33e-23!112;CL:0000049!2.33e-23!112;CL:0000557!1.28e-22!71;CL:0002057!9.36e-22!42;CL:0000860!5.51e-21!45;CL:0000839!1.18e-20!70;CL:0002009!9.10e-20!65;CL:0002194!1.49e-18!63;CL:0000576!1.49e-18!63;CL:0000040!1.49e-18!63;CL:0000559!1.49e-18!63;CL:0000037!2.96e-14!172;CL:0000566!2.96e-14!172;CL:0002032!1.69e-13!165;CL:0000837!1.69e-13!165;CL:0000738!6.66e-13!140;CL:0000988!1.48e-11!182;CL:0002031!1.56e-10!124;CL:0002087!1.02e-08!119 | |ontology_enrichment_celltype=CL:0000766!8.83e-25!76;CL:0000763!2.33e-23!112;CL:0000049!2.33e-23!112;CL:0000557!1.28e-22!71;CL:0002057!9.36e-22!42;CL:0000860!5.51e-21!45;CL:0000839!1.18e-20!70;CL:0002009!9.10e-20!65;CL:0002194!1.49e-18!63;CL:0000576!1.49e-18!63;CL:0000040!1.49e-18!63;CL:0000559!1.49e-18!63;CL:0000037!2.96e-14!172;CL:0000566!2.96e-14!172;CL:0002032!1.69e-13!165;CL:0000837!1.69e-13!165;CL:0000738!6.66e-13!140;CL:0000988!1.48e-11!182;CL:0002031!1.56e-10!124;CL:0002087!1.02e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.52e-26;33!CL:0002057;3.52e-26;33!CL:0000576;3.28e-19;48!CL:0000473;4.32e-17;39!CL:0000234;4.32e-17;39!CL:0000766;2.23e-13;69!CL:0000763;3.76e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.60e-30,72;CL:0000860,1.65e-29,42;CL:0002057,1.65e-29,42;CL:0000557,4.70e-28,67;CL:0000763,9.16e-28,108;CL:0000049,9.16e-28,108;CL:0000839,3.10e-25,66;CL:0002009,8.18e-24,61;CL:0000473,9.02e-24,48;CL:0000234,9.02e-24,48;CL:0002194,4.92e-22,59;CL:0000576,4.92e-22,59;CL:0000040,4.92e-22,59;CL:0000559,4.92e-22,59;CL:0000037,6.08e-17,168;CL:0002032,3.55e-16,161;CL:0000837,3.55e-16,161;CL:0000738,1.15e-15,136;CL:0000988,9.59e-15,177;CL:0002031,5.71e-13,120;CL:0002087,1.90e-10,115;CL:0000223,9.27e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;1.62e-21;42!CL:0000049;3.09e-07;108 | |||
|ontology_enrichment_disease=DOID:305!2.15e-12!106;DOID:0050687!1.48e-09!143;DOID:162!5.56e-08!235;DOID:14566!1.99e-07!239 | |ontology_enrichment_disease=DOID:305!2.15e-12!106;DOID:0050687!1.48e-09!143;DOID:162!5.56e-08!235;DOID:14566!1.99e-07!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.01e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.77e-22!102;UBERON:0003061!6.77e-22!102;UBERON:0002371!1.57e-18!80;UBERON:0001474!2.69e-18!86;UBERON:0002193!6.37e-17!112;UBERON:0004765!8.65e-15!101;UBERON:0001434!8.65e-15!101;UBERON:0002405!2.25e-11!115;UBERON:0000178!2.27e-07!15;UBERON:0000179!2.27e-07!15;UBERON:0000463!2.27e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.71e-08;15!UBERON:0000179;1.71e-08;15!UBERON:0000463;1.71e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.36e-29,98;UBERON:0003061,9.36e-29,98;UBERON:0002371,2.43e-24,76;UBERON:0002193,9.11e-24,108;UBERON:0001474,5.46e-22,82;UBERON:0004765,6.23e-20,90;UBERON:0002405,4.93e-17,93;UBERON:0001434,1.21e-16,100;UBERON:0000178,1.15e-08,15;UBERON:0000179,1.15e-08,15;UBERON:0000463,1.15e-08,15;UBERON:0003081,4.62e-08,203 | |||
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| ||
|short_description=p3@SPOPL | |short_description=p3@SPOPL | ||
}} | }} |
Latest revision as of 04:09, 17 September 2015
Short description: | p3@SPOPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPOPL_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 54bp_to_ENST00000430968_5end |
EntrezGene: | SPOPL |
HGNC: | 27934 |
UniProt: | F8WBB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.60e-30 | 72 |
classical monocyte | 1.65e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-29 | 42 |
granulocyte monocyte progenitor cell | 4.70e-28 | 67 |
myeloid cell | 9.16e-28 | 108 |
common myeloid progenitor | 9.16e-28 | 108 |
myeloid lineage restricted progenitor cell | 3.10e-25 | 66 |
macrophage dendritic cell progenitor | 8.18e-24 | 61 |
defensive cell | 9.02e-24 | 48 |
phagocyte | 9.02e-24 | 48 |
monopoietic cell | 4.92e-22 | 59 |
monocyte | 4.92e-22 | 59 |
monoblast | 4.92e-22 | 59 |
promonocyte | 4.92e-22 | 59 |
hematopoietic stem cell | 6.08e-17 | 168 |
hematopoietic oligopotent progenitor cell | 3.55e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.55e-16 | 161 |
leukocyte | 1.15e-15 | 136 |
hematopoietic cell | 9.59e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 5.71e-13 | 120 |
nongranular leukocyte | 1.90e-10 | 115 |
endodermal cell | 9.27e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.36e-29 | 98 |
blood island | 9.36e-29 | 98 |
bone marrow | 2.43e-24 | 76 |
hemolymphoid system | 9.11e-24 | 108 |
bone element | 5.46e-22 | 82 |
skeletal element | 6.23e-20 | 90 |
immune system | 4.93e-17 | 93 |
skeletal system | 1.21e-16 | 100 |
blood | 1.15e-08 | 15 |
haemolymphatic fluid | 1.15e-08 | 15 |
organism substance | 1.15e-08 | 15 |
lateral plate mesoderm | 4.62e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.01e-09 | 106 |