FFCP PHASE1:Hg19::chr14:23341336..23341351,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:23341336..23341351,+
|short_description=p6@LRP10
|description=CAGE_peak_6_at_LRP10_5end
|association_with_transcript=-161bp_to_ENST00000546834_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26020 | |EntrezGene=26020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14553 | |HGNC=14553 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-161bp_to_ENST00000546834_5end | |||
|cluster_id=chr14:23341336..23341351,+ | |||
|description=CAGE_peak_6_at_LRP10_5end | |||
|id=chr14:23341336..23341351,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.24e-22!180;CL:0000222!1.18e-16!119;CL:0000192!8.29e-15!42;CL:0000514!8.29e-15!42;CL:0000680!2.24e-14!57;CL:0000056!2.24e-14!57;CL:0000355!2.24e-14!57;CL:0000183!2.34e-14!59;CL:0000187!1.24e-13!54;CL:0000359!2.57e-12!32;CL:0000057!3.88e-12!75;CL:0000393!1.92e-09!60;CL:0000211!1.92e-09!60;CL:0000220!4.62e-07!246;CL:0002371!8.48e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.71e-12;32!CL:0000192;9.38e-12;43!CL:0000187;3.37e-08;55!CL:0002334;7.91e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.02e-17,121;CL:0000192,5.98e-16,43;CL:0000514,5.98e-16,43;CL:0000680,1.69e-15,58;CL:0000056,1.69e-15,58;CL:0000355,1.69e-15,58;CL:0000187,1.05e-14,55;CL:0000057,1.92e-13,76;CL:0000359,5.08e-13,32;CL:0000393,6.34e-11,61;CL:0000211,6.34e-11,61;CL:0002321,1.94e-07,250;CL:0000115,5.69e-07,36;CL:0002334,6.23e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;9.38e-12;43!CL:0000355;2.98e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!1.75e-23!113;UBERON:0004535!5.29e-23!110;UBERON:0004872!2.61e-20!84;UBERON:0000055!1.70e-19!69;UBERON:0002049!3.07e-19!79;UBERON:0007798!3.07e-19!79;UBERON:0001981!1.58e-18!60;UBERON:0007500!1.58e-18!60;UBERON:0004537!1.58e-18!60;UBERON:0006965!1.58e-18!60;UBERON:0001637!8.91e-16!42;UBERON:0003509!8.91e-16!42;UBERON:0004572!8.91e-16!42;UBERON:0003914!6.54e-15!118;UBERON:0000914!1.25e-13!83;UBERON:0002329!1.25e-13!83;UBERON:0003077!1.25e-13!83;UBERON:0003059!1.25e-13!83;UBERON:0007282!1.25e-13!83;UBERON:0009618!1.25e-13!83;UBERON:0007285!1.25e-13!83;UBERON:0004290!2.40e-13!70;UBERON:0004573!2.82e-13!33;UBERON:0004571!2.82e-13!33;UBERON:0002385!5.69e-13!63;UBERON:0001015!5.69e-13!63;UBERON:0000383!5.69e-13!63;UBERON:0000486!2.23e-12!82;UBERON:0001134!3.45e-12!61;UBERON:0002036!3.45e-12!61;UBERON:0003082!3.45e-12!61;UBERON:0005256!6.79e-12!143;UBERON:0000490!7.85e-10!138;UBERON:0002100!1.18e-09!216;UBERON:0000947!3.86e-08!21;UBERON:0010191!3.86e-08!21;UBERON:0000926!8.32e-08!448;UBERON:0004120!8.32e-08!448;UBERON:0006603!8.32e-08!448;UBERON:0003102!5.51e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.72e-13;33!UBERON:0004571;5.72e-13;33!UBERON:0001637;1.32e-12;42!UBERON:0003509;1.32e-12;42!UBERON:0004572;1.32e-12;42!UBERON:0007500;5.84e-10;56!UBERON:0001981;5.84e-10;56!UBERON:0004537;5.84e-10;56!UBERON:0000055;1.35e-09;65!UBERON:0000947;1.73e-08;21!UBERON:0010191;1.73e-08;21!UBERON:0003914;3.21e-08;74!UBERON:0002049;4.72e-08;75!UBERON:0007798;4.72e-08;75!UBERON:0001009;1.79e-07;112!UBERON:0004535;4.75e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,5.44e-24,112;UBERON:0004535,1.76e-23,109;UBERON:0004872,7.74e-21,83;UBERON:0000055,4.74e-20,68;UBERON:0002049,8.48e-20,78;UBERON:0007798,8.48e-20,78;UBERON:0007500,5.19e-19,59;UBERON:0001981,5.19e-19,59;UBERON:0004537,5.19e-19,59;UBERON:0006965,5.19e-19,59;UBERON:0001637,1.04e-16,42;UBERON:0003509,1.04e-16,42;UBERON:0004572,1.04e-16,42;UBERON:0007503,3.08e-16,78;UBERON:0003914,7.21e-16,117;UBERON:0002329,3.06e-14,71;UBERON:0003059,3.06e-14,71;UBERON:0007282,3.06e-14,71;UBERON:0004290,3.06e-14,71;UBERON:0009618,3.06e-14,71;UBERON:0002385,3.35e-14,64;UBERON:0001015,3.35e-14,64;UBERON:0000383,3.35e-14,64;UBERON:0004573,4.82e-14,33;UBERON:0004571,4.82e-14,33;UBERON:0007524,9.74e-14,73;UBERON:0003077,1.19e-13,72;UBERON:0007285,1.19e-13,72;UBERON:0001134,2.32e-13,62;UBERON:0002036,2.32e-13,62;UBERON:0003082,2.32e-13,62;UBERON:0000486,5.38e-13,83;UBERON:0005256,3.15e-12,122;UBERON:0000490,6.45e-12,148;UBERON:0000926,1.13e-11,315;UBERON:0004120,1.13e-11,315;UBERON:0006603,1.13e-11,315;UBERON:0003104,3.53e-10,160;UBERON:0009142,3.53e-10,160;UBERON:0002100,1.04e-08,199;UBERON:0000947,1.43e-08,21;UBERON:0010191,1.43e-08,21;UBERON:0003102,9.00e-07,99 | |||
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| ||
|short_description=p6@LRP10 | |||
}} | }} |
Latest revision as of 07:58, 19 September 2015
Short description: | p6@LRP10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LRP10_5end |
Coexpression cluster: | NA |
Association with transcript: | -161bp_to_ENST00000546834_5end |
EntrezGene: | LRP10 |
HGNC: | 14553 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.02e-17 | 121 |
smooth muscle cell | 5.98e-16 | 43 |
smooth muscle myoblast | 5.98e-16 | 43 |
muscle precursor cell | 1.69e-15 | 58 |
myoblast | 1.69e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.69e-15 | 58 |
muscle cell | 1.05e-14 | 55 |
fibroblast | 1.92e-13 | 76 |
vascular associated smooth muscle cell | 5.08e-13 | 32 |
electrically responsive cell | 6.34e-11 | 61 |
electrically active cell | 6.34e-11 | 61 |
embryonic cell | 1.94e-07 | 250 |
endothelial cell | 5.69e-07 | 36 |
preadipocyte | 6.23e-07 | 12 |