FFCP PHASE1:Hg19::chr14:23526715..23526738,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:23526715..23526738,-
|short_description=p1@CDH24
|description=CAGE_peak_1_at_CDH24_5end
|association_with_transcript=8bp_to_ENST00000397359,ENST0000042275...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64403 | |EntrezGene=64403 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14265 | |HGNC=14265 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UP0,E7EMU3 | |UniProt=Q86UP0,E7EMU3 | ||
|association_with_transcript=8bp_to_ENST00000397359,ENST00000422751,ENST00000487137,NM_022478,NM_144985,uc001wil.2,uc001win.3,uc010akf.2_5end | |||
|cluster_id=chr14:23526715..23526738,- | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_1_at_CDH24_5end | |||
|id=chr14:23526715..23526738,- | |||
|ontology_enrichment_celltype=CL:0000066!1.72e-20!254;CL:0002321!2.52e-15!248;CL:0000220!3.55e-15!246;CL:0000076!1.77e-10!62;CL:0002319!2.05e-08!25;CL:0000221!5.66e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.01e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.89e-20,253;CL:0002321,7.62e-16,250;CL:0000076,5.10e-10,63;CL:0002319,1.59e-08,25;CL:0000133,7.93e-07,59;CL:0000221,8.72e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.28e-15!143;DOID:162!7.13e-12!235;DOID:14566!1.04e-11!239;DOID:305!2.48e-11!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,8.50e-15,143;DOID:162,3.00e-11,235;DOID:14566,4.30e-11,239;DOID:305,5.23e-11,106 | |||
|ontology_enrichment_uberon=UBERON:0000064!6.69e-14!219;UBERON:0000119!7.08e-14!312;UBERON:0000483!3.59e-13!309;UBERON:0000481!7.74e-13!347;UBERON:0000475!2.83e-12!365;UBERON:0000477!2.57e-10!286;UBERON:0000073!8.25e-09!94;UBERON:0001016!8.25e-09!94;UBERON:0000924!1.24e-08!173;UBERON:0006601!1.24e-08!173;UBERON:0005743!2.24e-08!86;UBERON:0004121!3.26e-08!169;UBERON:0004111!5.56e-08!241;UBERON:0000063!7.13e-08!97;UBERON:0000025!1.20e-07!194;UBERON:0001017!1.26e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,8.32e-13,309;UBERON:0000483,4.00e-12,306;UBERON:0011216,7.37e-12,223;UBERON:0001016,2.22e-08,89;UBERON:0001017,7.15e-08,81;UBERON:0004121,7.95e-08,171;UBERON:0000924,7.95e-08,171;UBERON:0006601,7.95e-08,171;UBERON:0004111,1.18e-07,240;UBERON:0000025,1.83e-07,192 | |||
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| ||
|short_description=p1@CDH24 | |||
}} | }} |
Latest revision as of 08:42, 19 September 2015
Short description: | p1@CDH24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDH24_5end |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | 8bp_to_ENST00000397359, ENST00000422751, ENST00000487137, NM_022478, NM_144985, uc001wil.2, uc001win.3, uc010akf.2_5end |
EntrezGene: | CDH24 |
HGNC: | 14265 |
UniProt: | Q86UP0E7EMU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.89e-20 | 253 |
embryonic cell | 7.62e-16 | 250 |
squamous epithelial cell | 5.10e-10 | 63 |
neural cell | 1.59e-08 | 25 |
neurectodermal cell | 7.93e-07 | 59 |
ectodermal cell | 8.72e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cell layer | 8.32e-13 | 309 |
epithelium | 4.00e-12 | 306 |
organ system subdivision | 7.37e-12 | 223 |
nervous system | 2.22e-08 | 89 |
central nervous system | 7.15e-08 | 81 |
ectoderm-derived structure | 7.95e-08 | 171 |
ectoderm | 7.95e-08 | 171 |
presumptive ectoderm | 7.95e-08 | 171 |
anatomical conduit | 1.18e-07 | 240 |
tube | 1.83e-07 | 192 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.50e-15 | 143 |
cancer | 3.00e-11 | 235 |
disease of cellular proliferation | 4.30e-11 | 239 |
carcinoma | 5.23e-11 | 106 |