FFCP PHASE1:Hg19::chr2:20402007..20402018,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:20402007..20402018,- | |||
|description=CAGE_peak_at_chr2:20402007..20402018,- | |description=CAGE_peak_at_chr2:20402007..20402018,- | ||
|id=chr2:20402007..20402018,- | |id=chr2:20402007..20402018,- | ||
|ontology_enrichment_celltype=CL:0000223!3.82e-21!59;CL:0000066!2.33e-20!254;CL:0002076!7.90e-19!43;CL:0002368!1.18e-09!13;CL:0002251!6.83e-08!21;CL:0000220!3.52e-07!246;CL:0002321!5.16e-07!248 | |ontology_enrichment_celltype=CL:0000223!3.82e-21!59;CL:0000066!2.33e-20!254;CL:0002076!7.90e-19!43;CL:0002368!1.18e-09!13;CL:0002251!6.83e-08!21;CL:0000220!3.52e-07!246;CL:0002321!5.16e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.05e-19;3!CL:0002076;3.03e-07;42!CL:0002202;3.44e-07;9!CL:0002632;3.44e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.39e-19,3;CL:0000223,2.07e-11,58;CL:0002076,2.54e-08,42;CL:0002202,3.55e-07,9;CL:0002632,3.55e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.56e-16;1!CL:0000223;4.40e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!4.28e-11!14;DOID:0050687!5.46e-11!143;DOID:305!7.35e-11!106 | |ontology_enrichment_disease=DOID:1749!4.28e-11!14;DOID:0050687!5.46e-11!143;DOID:305!7.35e-11!106 | ||
|ontology_enrichment_disease_v019=DOID:3910;2.31e-08;2!DOID:3307;2.31e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.73e-08,2;DOID:3910,1.86e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.47e-18!169;UBERON:0000925!1.47e-18!169;UBERON:0006595!1.47e-18!169;UBERON:0001007!5.60e-14!155;UBERON:0001555!5.60e-14!155;UBERON:0007026!5.60e-14!155;UBERON:0004921!1.61e-11!129;UBERON:0004185!1.61e-11!129;UBERON:0005911!3.74e-11!82;UBERON:0000161!5.21e-11!35;UBERON:0005153!1.14e-10!37;UBERON:0000077!1.02e-09!130;UBERON:0001004!5.63e-09!72;UBERON:0005157!4.31e-08!51;UBERON:0000344!4.69e-08!12;UBERON:0003729!4.11e-07!5;UBERON:0002365!6.82e-07!31;UBERON:0002330!6.82e-07!31 | |ontology_enrichment_uberon=UBERON:0004119!1.47e-18!169;UBERON:0000925!1.47e-18!169;UBERON:0006595!1.47e-18!169;UBERON:0001007!5.60e-14!155;UBERON:0001555!5.60e-14!155;UBERON:0007026!5.60e-14!155;UBERON:0004921!1.61e-11!129;UBERON:0004185!1.61e-11!129;UBERON:0005911!3.74e-11!82;UBERON:0000161!5.21e-11!35;UBERON:0005153!1.14e-10!37;UBERON:0000077!1.02e-09!130;UBERON:0001004!5.63e-09!72;UBERON:0005157!4.31e-08!51;UBERON:0000344!4.69e-08!12;UBERON:0003729!4.11e-07!5;UBERON:0002365!6.82e-07!31;UBERON:0002330!6.82e-07!31 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.05e-19;3!UBERON:0000486;2.92e-11;12!UBERON:0003929;5.37e-09;7!UBERON:0004903;2.31e-08;2!UBERON:0002173;2.31e-08;2!UBERON:0002186;2.31e-08;2!UBERON:0003350;5.56e-08;8!UBERON:0001828;5.56e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.39e-19,3;UBERON:0004903,1.86e-08,2;UBERON:0002173,1.86e-08,2;UBERON:0002186,1.86e-08,2;UBERON:0005911,5.76e-08,82;UBERON:0003350,6.18e-08,8;UBERON:0001828,6.18e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,0,1.14721838155602,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,1.77236972004421,0,0.122988438543114,0,0.548751427043128,2.24803506515239,0.603173834469785,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.447792613514241,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0,0.601519410909855,1.10497186723076,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.991709492165869,0.960950336825531,0.127612712494584,0.910420027699949,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.962221127255121,0,1.08890984861323,1.69458841398202,0.43050537267123,0,2.21715076768338,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.455173793141999,1.77977555204936,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0.46112780877612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0.173559738335131,0.685946781900644,0.0870592065804026,0,0,0,0,0,0.290967049465258,0,0,0,0.19871461170299,0,0.782205530939212,0.240476460754601,0,0,0,0,0,0.14405479798815,0,0.471388069233591,0.407712618220842,0.313808538937,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.104909176269996,0.105600336519406,0,0.191915197319445,0,0,0.76280561296425,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0.704815022316672,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0.422624246717254,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,4.7899279887825,0,0,0,0,0.118193840883968,0.444925607568277,0,0,0.280272163313789,0,0,0,0,0.158013611732727,0,0.173858272302579,0,0.414432328326074,0.17071847709395,0.691259661814092,0,0,0.0852134047591577,0,0,0,0.955538938977433,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,1.42843150884526,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0,0,0.162806537221949,0,1.9307228228694,0,0,0,0,0.665756774185513,0,0 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| ||
|short_description=p@chr2:20402007..20402018,- | |short_description=p@chr2:20402007..20402018,- | ||
}} | }} |
Latest revision as of 05:12, 29 July 2015
Short description: | p@chr2:20402007..20402018, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:20402007..20402018, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.39e-19 | 3 |
endodermal cell | 2.07e-11 | 58 |
endo-epithelial cell | 2.54e-08 | 42 |
epithelial cell of tracheobronchial tree | 3.55e-07 | 9 |
epithelial cell of lower respiratory tract | 3.55e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.39e-19 | 3 |
bronchoalveolar duct junction | 1.86e-08 | 2 |
alveolar duct | 1.86e-08 | 2 |
bronchiole | 1.86e-08 | 2 |
endo-epithelium | 5.76e-08 | 82 |
epithelium of mucosa | 6.18e-08 | 8 |
gingiva | 6.18e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.73e-08 | 2 |
lung adenocarcinoma | 1.86e-08 | 2 |