FFCP PHASE1:Hg19::chr14:24784074..24784108,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:24784074..24784108,+
|short_description=p2@LTB4R
|description=CAGE_peak_2_at_LTB4R_5end
|association_with_transcript=168bp_to_ENST00000396782,uc001wou.2_5...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1241 | |EntrezGene=1241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6713 | |HGNC=6713 | ||
|TSSclassifier=strong | |||
|UniProt=Q15722 | |UniProt=Q15722 | ||
|association_with_transcript=168bp_to_ENST00000396782,uc001wou.2_5end | |||
|cluster_id=chr14:24784074..24784108,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_LTB4R_5end | |||
|id=chr14:24784074..24784108,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.26e-53!76;CL:0002057!1.21e-43!42;CL:0000839!6.72e-42!70;CL:0002194!1.43e-41!63;CL:0000576!1.43e-41!63;CL:0000040!1.43e-41!63;CL:0000559!1.43e-41!63;CL:0000557!5.30e-41!71;CL:0002009!1.15e-39!65;CL:0000860!1.46e-39!45;CL:0000763!1.57e-35!112;CL:0000049!1.57e-35!112;CL:0000738!2.21e-32!140;CL:0000037!1.22e-26!172;CL:0000566!1.22e-26!172;CL:0002087!1.11e-25!119;CL:0002032!4.15e-25!165;CL:0000837!4.15e-25!165;CL:0002031!1.74e-24!124;CL:0000988!2.67e-24!182;CL:0000094!9.05e-11!8;CL:0002393!2.30e-08!9;CL:0002397!2.30e-08!9;CL:0000081!3.67e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-64;33!CL:0002057;1.29e-64;33!CL:0000473;1.02e-56;39!CL:0000234;1.02e-56;39!CL:0000576;4.56e-40;48!CL:0000766;2.07e-35;69!CL:0000094;9.54e-20;8!CL:0000763;6.42e-16;100!CL:0000081;6.84e-14;11!CL:0002087;1.05e-12;104!CL:0000738;9.02e-11;136!CL:0000775;6.02e-09;3!CL:0002393;6.64e-09;6!CL:0002397;6.64e-09;6!CL:0000767;1.13e-07;3!CL:0000988;6.36e-07;177!CL:0000226;7.61e-07;3!CL:0000842;7.61e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.42e-79,72;CL:0000473,2.32e-76,48;CL:0000234,2.32e-76,48;CL:0000860,3.79e-72,42;CL:0002057,3.79e-72,42;CL:0002194,1.57e-61,59;CL:0000576,1.57e-61,59;CL:0000040,1.57e-61,59;CL:0000559,1.57e-61,59;CL:0000839,1.85e-59,66;CL:0002009,3.94e-59,61;CL:0000557,2.18e-58,67;CL:0000763,5.29e-50,108;CL:0000049,5.29e-50,108;CL:0000738,1.34e-46,136;CL:0002087,1.58e-36,115;CL:0000037,3.36e-36,168;CL:0002032,4.84e-34,161;CL:0000837,4.84e-34,161;CL:0000988,1.53e-33,177;CL:0002031,5.50e-33,120;CL:0000094,9.22e-20,8;CL:0000081,6.68e-14,11;CL:0000134,4.28e-09,354;CL:0000775,6.03e-09,3;CL:0002320,1.21e-08,361;CL:0000767,1.09e-07,3;CL:0000219,4.46e-07,386;CL:0000226,7.45e-07,3;CL:0000842,7.45e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-52;42!CL:0000049;1.44e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.25e-46!102;UBERON:0003061!1.25e-46!102;UBERON:0002193!5.50e-43!112;UBERON:0002371!5.72e-34!80;UBERON:0001474!3.98e-30!86;UBERON:0002405!1.89e-27!115;UBERON:0004765!1.04e-23!101;UBERON:0001434!1.04e-23!101;UBERON:0007023!1.93e-17!115;UBERON:0003081!2.49e-14!216;UBERON:0000178!1.77e-12!15;UBERON:0000179!1.77e-12!15;UBERON:0000463!1.77e-12!15;UBERON:0002204!6.26e-10!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.27e-21;15!UBERON:0000179;1.27e-21;15!UBERON:0000463;1.27e-21;15!UBERON:0002390;2.99e-11;32!UBERON:0002193;5.71e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.39e-69,98;UBERON:0003061,1.39e-69,98;UBERON:0002193,3.05e-64,108;UBERON:0002371,5.21e-50,76;UBERON:0001474,1.94e-45,82;UBERON:0002405,4.72e-45,93;UBERON:0004765,2.74e-40,90;UBERON:0001434,5.20e-35,100;UBERON:0003081,1.11e-27,203;UBERON:0000178,1.26e-21,15;UBERON:0000179,1.26e-21,15;UBERON:0000463,1.26e-21,15;UBERON:0002204,5.31e-17,167;UBERON:0000926,2.68e-12,315;UBERON:0004120,2.68e-12,315;UBERON:0006603,2.68e-12,315;UBERON:0002384,1.56e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11373559903575,8.44424675813868,5.88301268601089,1.83884244895785,0,0.369754010166788,0,0,0,3.32397245119126,5.01361118675354,4.55722828503289,0.223915474239924,2.59114932815184,0.77272670290256,14.8306203555156,6.42389104270976,7.76268995801012,11.6214518452842,4.93401465626191,6.81354015969228,15.8230815777183,8.70946402198942,3.31075121844019,11.0318617835718,4.51839278508678,8.12558919566051,17.130052898377,5.73102915121476,6.06753408001728,12.8555234795779,8.98601275813062,8.31138263538754,11.8746468067218,6.18337338627059,3.40979800426155,11.8985787837719,2.8369261234557,6.22822248995575,10.3011952755265,8.34372669472322,6.73285418585862,4.23779651843358,5.52416453981347,7.59509729858123,0.633765858935825,1.91343869968539,2.72556239160889,12.8054639507004,14.5671586056261,14.1438516293431,0.285012743741249,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,1.17447437874188,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0.903450714466637,0.383959833463255,1.24930726552346,1.18388626022008,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.522389211897802,0.132957960518865,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,44.8053419282615,73.6782501881818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,3.82010095164197,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.468008530278475,1.63494278517601,0.93733833986777,0,0,0,0,0,1.47798971368783,10.2136183455342,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,11.0496560115068,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0.394061520403854,0,0.641715181398742,0,0,0,0.167516265334349,0,36.7013441734119,68.8071356169257,64.6488200960215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,4.52999821719095,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,1.34060455107157,0,1.31801321087491,0,0,0,0,22.8351424154476,16.0573813499899,25.0644762356632,14.2939065274673,18.0999400157925,25.9389324477087,19.9811631778102,19.8281294073568,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0,5.49608551609224,0,0,0,0.19538809540204,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0.890894042497916,0,0,0,0,3.13127361030843,0,0.19924798825107,0,0,0,0,0,0,0,0,0.394573622547734,19.1586473877552,0,0,0.371072392647405,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.884612114798832,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.547621515567972,0,0,0,0,0,0.717873024576814,0.399358000997982,0,1.33902874465124,0.268733889946905,0,0,0,0,0.0674035438541849,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0.394028536495991,0.419636705079985,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,1.32506888912221,0.129282956361551,0,0.171086837884329,0,2.99004755189545,0.628817220398664,3.31391244277756,9.42715441442707,0,0,0,0,0,0,0,0,0.886068179966986,0,0.625954653532499,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,5.59869534029676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.0691572524642179,0,0,0,0,0.550285795565037,0.115525666150338,0,0,0,0.451261970095544,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.443511850813194,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.500335809236594,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.102662806856247,0,0,0,0,0,0,0,0,0.308696632431779,1.09279780251979,0,0,0,0.392616934229891,0.297046400327086,0,0,6.57887425858975,5.67229414167479,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.20686599172379,1.70587185520785,0,0.322944549180031,0.558672428662721,0,0,0.404234377916439,2.39488422686657,0.342233301085281,0.673520530145875,1.5061663132462,0.332660356546013,0,0,0,0,0,0.488965776731466,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11373559903575,8.44424675813868,5.88301268601089,1.83884244895785,0,0.369754010166788,0,0,0,3.32397245119126,5.01361118675354,4.55722828503289,0.223915474239924,2.59114932815184,0.77272670290256,14.8306203555156,6.42389104270976,7.76268995801012,11.6214518452842,4.93401465626191,6.81354015969228,15.8230815777183,8.70946402198942,3.31075121844019,11.0318617835718,4.51839278508678,8.12558919566051,17.130052898377,5.73102915121476,6.06753408001728,12.8555234795779,8.98601275813062,8.31138263538754,11.8746468067218,6.18337338627059,3.40979800426155,11.8985787837719,2.8369261234557,6.22822248995575,10.3011952755265,8.34372669472322,6.73285418585862,4.23779651843358,5.52416453981347,7.59509729858123,0.633765858935825,1.91343869968539,2.72556239160889,12.8054639507004,14.5671586056261,14.1438516293431,0.285012743741249,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,1.17447437874188,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0.903450714466637,0.383959833463255,1.24930726552346,1.18388626022008,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.522389211897802,0.132957960518865,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,44.8053419282615,73.6782501881818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,3.82010095164197,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.468008530278475,1.63494278517601,0.93733833986777,0,0,0,0,0,1.47798971368783,10.2136183455342,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,11.0496560115068,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0.394061520403854,0,0.641715181398742,0,0,0,0.167516265334349,0,36.7013441734119,68.8071356169257,64.6488200960215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,4.52999821719095,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,1.34060455107157,0,1.31801321087491,0,0,0,0,22.8351424154476,16.0573813499899,25.0644762356632,14.2939065274673,18.0999400157925,25.9389324477087,19.9811631778102,19.8281294073568,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0,5.49608551609224,0,0,0,0.19538809540204,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0.890894042497916,0,0,0,0,3.13127361030843,0,0.19924798825107,0,0,0,0,0,0,0,0,0.394573622547734,19.1586473877552,0,0,0.371072392647405,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.884612114798832,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.547621515567972,0,0,0,0,0,0.717873024576814,0.399358000997982,0,1.33902874465124,0.268733889946905,0,0,0,0,0.0674035438541849,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0.394028536495991,0.419636705079985,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,1.32506888912221,0.129282956361551,0,0.171086837884329,0,2.99004755189545,0.628817220398664,3.31391244277756,9.42715441442707,0,0,0,0,0,0,0,0,0.886068179966986,0,0.625954653532499,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,5.59869534029676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.0691572524642179,0,0,0,0,0.550285795565037,0.115525666150338,0,0,0,0.451261970095544,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.443511850813194,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.500335809236594,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.102662806856247,0,0,0,0,0,0,0,0,0.308696632431779,1.09279780251979,0,0,0,0.392616934229891,0.297046400327086,0,0,6.57887425858975,5.67229414167479,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.20686599172379,1.70587185520785,0,0.322944549180031,0.558672428662721,0,0,0.404234377916439,2.39488422686657,0.342233301085281,0.673520530145875,1.5061663132462,0.332660356546013,0,0,0,0,0,0.488965776731466,0,0,0,0 | ||
|short_description=p2@LTB4R | |||
}} | }} |
Latest revision as of 14:37, 19 September 2015
Short description: | p2@LTB4R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LTB4R_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 168bp_to_ENST00000396782, uc001wou.2_5end |
EntrezGene: | LTB4R |
HGNC: | 6713 |
UniProt: | Q15722 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.42e-79 | 72 |
defensive cell | 2.32e-76 | 48 |
phagocyte | 2.32e-76 | 48 |
classical monocyte | 3.79e-72 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.79e-72 | 42 |
monopoietic cell | 1.57e-61 | 59 |
monocyte | 1.57e-61 | 59 |
monoblast | 1.57e-61 | 59 |
promonocyte | 1.57e-61 | 59 |
myeloid lineage restricted progenitor cell | 1.85e-59 | 66 |
macrophage dendritic cell progenitor | 3.94e-59 | 61 |
granulocyte monocyte progenitor cell | 2.18e-58 | 67 |
myeloid cell | 5.29e-50 | 108 |
common myeloid progenitor | 5.29e-50 | 108 |
leukocyte | 1.34e-46 | 136 |
nongranular leukocyte | 1.58e-36 | 115 |
hematopoietic stem cell | 3.36e-36 | 168 |
hematopoietic oligopotent progenitor cell | 4.84e-34 | 161 |
hematopoietic multipotent progenitor cell | 4.84e-34 | 161 |
hematopoietic cell | 1.53e-33 | 177 |
hematopoietic lineage restricted progenitor cell | 5.50e-33 | 120 |
granulocyte | 9.22e-20 | 8 |
blood cell | 6.68e-14 | 11 |
mesenchymal cell | 4.28e-09 | 354 |
neutrophil | 6.03e-09 | 3 |
connective tissue cell | 1.21e-08 | 361 |
basophil | 1.09e-07 | 3 |
motile cell | 4.46e-07 | 386 |
single nucleate cell | 7.45e-07 | 3 |
mononuclear cell | 7.45e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.39e-69 | 98 |
blood island | 1.39e-69 | 98 |
hemolymphoid system | 3.05e-64 | 108 |
bone marrow | 5.21e-50 | 76 |
bone element | 1.94e-45 | 82 |
immune system | 4.72e-45 | 93 |
skeletal element | 2.74e-40 | 90 |
skeletal system | 5.20e-35 | 100 |
lateral plate mesoderm | 1.11e-27 | 203 |
blood | 1.26e-21 | 15 |
haemolymphatic fluid | 1.26e-21 | 15 |
organism substance | 1.26e-21 | 15 |
musculoskeletal system | 5.31e-17 | 167 |
mesoderm | 2.68e-12 | 315 |
mesoderm-derived structure | 2.68e-12 | 315 |
presumptive mesoderm | 2.68e-12 | 315 |
connective tissue | 1.56e-08 | 371 |