FFCP PHASE1:Hg19::chr14:39649701..39649729,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:39649701..39649729,+
|short_description=p12@PNN
|description=CAGE_peak_12_at_PNN_5end
|association_with_transcript=0bp_to_AK304622_5end
|EntrezGene=5411
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5411 | |EntrezGene=5411 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9162 | |HGNC=9162 | ||
|TSSclassifier=strong | |||
|UniProt=B4E392 | |UniProt=B4E392 | ||
|association_with_transcript=0bp_to_AK304622_5end | |||
|cluster_id=chr14:39649701..39649729,+ | |||
|coexpression_cluster_id=C664 | |||
|description=CAGE_peak_12_at_PNN_5end | |||
|id=chr14:39649701..39649729,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,6.04e-08,161;CL:0000837,6.04e-08,161;CL:0000037,9.49e-08,168;CL:0000988,7.25e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.32e-26!235;DOID:14566!5.93e-25!239;DOID:2531!1.17e-13!51;DOID:0060083!1.17e-13!51;DOID:0050686!3.01e-13!137;DOID:0050687!1.95e-12!143;DOID:1240!9.49e-12!39;DOID:8692!6.64e-10!31;DOID:305!1.28e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.03e-08;31!DOID:1240;3.78e-08;39!DOID:2531;1.04e-07;51!DOID:0060083;1.04e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.64e-12,235;DOID:2531,2.14e-12,51;DOID:0060083,2.14e-12,51;DOID:14566,1.06e-11,239;DOID:1240,4.90e-11,39;DOID:8692,6.14e-09,31;DOID:0050686,8.53e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.88e-07,53;UBERON:0002616,6.88e-07,53;UBERON:0001049,7.18e-07,56;UBERON:0005068,7.18e-07,56;UBERON:0006241,7.18e-07,56;UBERON:0007135,7.18e-07,56 | |||
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| ||
|short_description=p12@PNN | |||
}} | }} |
Latest revision as of 00:11, 20 September 2015
Short description: | p12@PNN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PNN_5end |
Coexpression cluster: | C664_medulloblastoma_acute_diffuse_small_gall_neuroectodermal_gastrointestinal |
Association with transcript: | 0bp_to_AK304622_5end |
EntrezGene: | PNN |
HGNC: | 9162 |
UniProt: | B4E392 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 6.04e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.04e-08 | 161 |
hematopoietic stem cell | 9.49e-08 | 168 |
hematopoietic cell | 7.25e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.88e-07 | 53 |
regional part of brain | 6.88e-07 | 53 |
neural tube | 7.18e-07 | 56 |
neural rod | 7.18e-07 | 56 |
future spinal cord | 7.18e-07 | 56 |
neural keel | 7.18e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.64e-12 | 235 |
hematologic cancer | 2.14e-12 | 51 |
immune system cancer | 2.14e-12 | 51 |
disease of cellular proliferation | 1.06e-11 | 239 |
leukemia | 4.90e-11 | 39 |
myeloid leukemia | 6.14e-09 | 31 |
organ system cancer | 8.53e-07 | 137 |