FFCP PHASE1:Hg19::chr2:240497949..240497953,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:240497949..240497953,+ | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_at_chr2:240497949..240497953,+ | |description=CAGE_peak_at_chr2:240497949..240497953,+ | ||
|id=chr2:240497949..240497953,+ | |id=chr2:240497949..240497953,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.44e-50!42;CL:0000860!9.25e-46!45;CL:0000557!4.16e-35!71;CL:0000839!1.21e-33!70;CL:0000766!2.78e-33!76;CL:0002009!7.25e-32!65;CL:0002194!1.17e-29!63;CL:0000576!1.17e-29!63;CL:0000040!1.17e-29!63;CL:0000559!1.17e-29!63;CL:0000763!5.53e-29!112;CL:0000049!5.53e-29!112;CL:0000738!1.47e-23!140;CL:0002031!6.34e-21!124;CL:0000037!9.53e-20!172;CL:0000566!9.53e-20!172;CL:0002032!1.21e-19!165;CL:0000837!1.21e-19!165;CL:0000988!1.35e-17!182;CL:0002087!3.06e-15!119;CL:0000453!1.86e-07!5 | |ontology_enrichment_celltype=CL:0002057!4.44e-50!42;CL:0000860!9.25e-46!45;CL:0000557!4.16e-35!71;CL:0000839!1.21e-33!70;CL:0000766!2.78e-33!76;CL:0002009!7.25e-32!65;CL:0002194!1.17e-29!63;CL:0000576!1.17e-29!63;CL:0000040!1.17e-29!63;CL:0000559!1.17e-29!63;CL:0000763!5.53e-29!112;CL:0000049!5.53e-29!112;CL:0000738!1.47e-23!140;CL:0002031!6.34e-21!124;CL:0000037!9.53e-20!172;CL:0000566!9.53e-20!172;CL:0002032!1.21e-19!165;CL:0000837!1.21e-19!165;CL:0000988!1.35e-17!182;CL:0002087!3.06e-15!119;CL:0000453!1.86e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.02e-80;33!CL:0002057;6.02e-80;33!CL:0000473;3.41e-58;39!CL:0000234;3.41e-58;39!CL:0000576;4.22e-38;48!CL:0000766;4.16e-26;69!CL:0000763;3.38e-13;100!CL:0000097;6.53e-10;5!CL:0002087;8.18e-10;104!CL:0000738;9.78e-09;136!CL:0001014;7.87e-07;2!CL:0001016;7.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.35e-71,42;CL:0002057,1.35e-71,42;CL:0000473,2.36e-65,48;CL:0000234,2.36e-65,48;CL:0000557,5.25e-62,67;CL:0000839,1.55e-56,66;CL:0002009,8.03e-55,61;CL:0000766,5.48e-54,72;CL:0002194,1.90e-50,59;CL:0000576,1.90e-50,59;CL:0000040,1.90e-50,59;CL:0000559,1.90e-50,59;CL:0000763,5.77e-41,108;CL:0000049,5.77e-41,108;CL:0002031,4.44e-34,120;CL:0000738,3.11e-32,136;CL:0002032,5.49e-27,161;CL:0000837,5.49e-27,161;CL:0000037,2.07e-25,168;CL:0002087,5.37e-25,115;CL:0000988,1.45e-23,177;CL:0000097,6.27e-10,5;CL:0002028,6.27e-10,5 | |||
|ontology_enrichment_development_v019=CL:0002057;6.63e-52;42!CL:0000049;7.22e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.09e-29!80;UBERON:0001474!2.77e-26!86;UBERON:0004765!2.51e-22!101;UBERON:0001434!2.51e-22!101;UBERON:0002390!5.61e-21!102;UBERON:0003061!5.61e-21!102;UBERON:0002193!1.09e-18!112;UBERON:0002405!8.23e-18!115;UBERON:0002204!8.90e-11!167;UBERON:0001737!3.54e-09!9 | |ontology_enrichment_uberon=UBERON:0002371!2.09e-29!80;UBERON:0001474!2.77e-26!86;UBERON:0004765!2.51e-22!101;UBERON:0001434!2.51e-22!101;UBERON:0002390!5.61e-21!102;UBERON:0003061!5.61e-21!102;UBERON:0002193!1.09e-18!112;UBERON:0002405!8.23e-18!115;UBERON:0002204!8.90e-11!167;UBERON:0001737!3.54e-09!9 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.53e-53,76;UBERON:0001474,6.43e-49,82;UBERON:0002405,2.55e-44,93;UBERON:0004765,1.05e-43,90;UBERON:0002390,1.51e-41,98;UBERON:0003061,1.51e-41,98;UBERON:0001434,2.36e-38,100;UBERON:0002193,9.01e-37,108;UBERON:0002204,1.61e-21,167;UBERON:0003081,6.90e-16,203;UBERON:0000926,2.18e-07,315;UBERON:0004120,2.18e-07,315;UBERON:0006603,2.18e-07,315 | |||
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| ||
|short_description=p@chr2:240497949..240497953,+ | |short_description=p@chr2:240497949..240497953,+ | ||
}} | }} |
Latest revision as of 08:25, 29 July 2015
Short description: | p@chr2:240497949..240497953, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:240497949..240497953, + |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.35e-71 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-71 | 42 |
defensive cell | 2.36e-65 | 48 |
phagocyte | 2.36e-65 | 48 |
granulocyte monocyte progenitor cell | 5.25e-62 | 67 |
myeloid lineage restricted progenitor cell | 1.55e-56 | 66 |
macrophage dendritic cell progenitor | 8.03e-55 | 61 |
myeloid leukocyte | 5.48e-54 | 72 |
monopoietic cell | 1.90e-50 | 59 |
monocyte | 1.90e-50 | 59 |
monoblast | 1.90e-50 | 59 |
promonocyte | 1.90e-50 | 59 |
myeloid cell | 5.77e-41 | 108 |
common myeloid progenitor | 5.77e-41 | 108 |
hematopoietic lineage restricted progenitor cell | 4.44e-34 | 120 |
leukocyte | 3.11e-32 | 136 |
hematopoietic oligopotent progenitor cell | 5.49e-27 | 161 |
hematopoietic multipotent progenitor cell | 5.49e-27 | 161 |
hematopoietic stem cell | 2.07e-25 | 168 |
nongranular leukocyte | 5.37e-25 | 115 |
hematopoietic cell | 1.45e-23 | 177 |
mast cell | 6.27e-10 | 5 |
basophil mast progenitor cell | 6.27e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.53e-53 | 76 |
bone element | 6.43e-49 | 82 |
immune system | 2.55e-44 | 93 |
skeletal element | 1.05e-43 | 90 |
hematopoietic system | 1.51e-41 | 98 |
blood island | 1.51e-41 | 98 |
skeletal system | 2.36e-38 | 100 |
hemolymphoid system | 9.01e-37 | 108 |
musculoskeletal system | 1.61e-21 | 167 |
lateral plate mesoderm | 6.90e-16 | 203 |
mesoderm | 2.18e-07 | 315 |
mesoderm-derived structure | 2.18e-07 | 315 |
presumptive mesoderm | 2.18e-07 | 315 |