FFCP PHASE1:Hg19::chr9:12694221..12694237,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt=Q6LES1 | |UniProt=Q6LES1 | ||
|association_with_transcript=224bp_to_CR407683_5end | |association_with_transcript=224bp_to_CR407683_5end | ||
|cluster_id=chr9:12694221..12694237,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_2_at_TYRP1_5end | |description=CAGE_peak_2_at_TYRP1_5end | ||
|id=chr9:12694221..12694237,+ | |id=chr9:12694221..12694237,+ | ||
|ontology_enrichment_celltype=CL:0000148!9.21e-48!10;CL:0000541!9.21e-48!10;CL:0000147!1.22e-42!14;CL:0002567!8.49e-24!3;CL:0000710!2.27e-23!20;CL:0000325!8.82e-18!39;CL:0002077!2.83e-17!33;CL:0000075!4.96e-17!27;CL:0000453!5.46e-14!5;CL:0000333!2.80e-10!41;CL:0002566!3.87e-09!1;CL:0000149!1.53e-08!4;CL:0000990!5.39e-08!8;CL:0000221!4.76e-07!71;CL:0000133!6.48e-07!59 | |ontology_enrichment_celltype=CL:0000148!9.21e-48!10;CL:0000541!9.21e-48!10;CL:0000147!1.22e-42!14;CL:0002567!8.49e-24!3;CL:0000710!2.27e-23!20;CL:0000325!8.82e-18!39;CL:0002077!2.83e-17!33;CL:0000075!4.96e-17!27;CL:0000453!5.46e-14!5;CL:0000333!2.80e-10!41;CL:0002566!3.87e-09!1;CL:0000149!1.53e-08!4;CL:0000990!5.39e-08!8;CL:0000221!4.76e-07!71;CL:0000133!6.48e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.54e-65;10!CL:0000147;4.60e-60;14!CL:0002567;9.96e-41;3!CL:0000710;2.44e-32;20!CL:0000075;7.50e-24;27!CL:0002077;1.06e-16;34!CL:0002566;7.13e-15;1!CL:0000149;3.73e-14;4!CL:0000453;2.06e-11;5!CL:0002600;8.89e-08;2!CL:0000990;9.93e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.54e-65,10;CL:0000541,5.54e-65,10;CL:0000147,4.43e-60,14;CL:0002567,9.96e-41,3;CL:0000710,2.44e-32,20;CL:0000075,7.50e-24,27;CL:0002077,7.55e-19,34;CL:0002566,7.13e-15,1;CL:0000333,8.44e-15,41;CL:0000149,3.61e-14,4;CL:0000453,1.95e-11,5;CL:0000133,2.85e-10,59;CL:0000221,2.30e-08,72;CL:0002600,9.19e-08,2;CL:0000990,9.64e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.09e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.09e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001896!3.35e-22!3;UBERON:0005290!3.35e-22!3;UBERON:0010096!3.35e-22!3;UBERON:0002298!1.12e-08!8;UBERON:0007029!1.13e-08!1;UBERON:0000966!6.27e-07!5;UBERON:0005388!6.27e-07!5;UBERON:0001802!6.27e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.11e-11;5!UBERON:0005388;2.11e-11;5!UBERON:0001802;2.11e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.15e-09,6;UBERON:0005388,1.15e-09,6;UBERON:0001802,1.15e-09,6 | |||
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|short_description=p2@TYRP1 | |short_description=p2@TYRP1 | ||
}} | }} |
Latest revision as of 23:38, 24 September 2015
Short description: | p2@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 224bp_to_CR407683_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | Q6LES1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.54e-65 | 10 |
melanoblast | 5.54e-65 | 10 |
pigment cell | 4.43e-60 | 14 |
light melanocyte | 9.96e-41 | 3 |
neurecto-epithelial cell | 2.44e-32 | 20 |
columnar/cuboidal epithelial cell | 7.50e-24 | 27 |
ecto-epithelial cell | 7.55e-19 | 34 |
dark melanocyte | 7.13e-15 | 1 |
migratory neural crest cell | 8.44e-15 | 41 |
visual pigment cell | 3.61e-14 | 4 |
Langerhans cell | 1.95e-11 | 5 |
neurectodermal cell | 2.85e-10 | 59 |
ectodermal cell | 2.30e-08 | 72 |
smooth muscle cell of trachea | 9.19e-08 | 2 |
conventional dendritic cell | 9.64e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
retina | 1.15e-09 | 6 |
photoreceptor array | 1.15e-09 | 6 |
posterior segment of eyeball | 1.15e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.09e-08 | 2 |