FFCP PHASE1:Hg19::chr2:27938986..27938991,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:27938986..27938991,+ | |||
|coexpression_cluster_id=C188 | |||
|description=CAGE_peak_at_chr2:27938986..27938991,+ | |description=CAGE_peak_at_chr2:27938986..27938991,+ | ||
|id=chr2:27938986..27938991,+ | |id=chr2:27938986..27938991,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000632;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.66e-18;1!UBERON:0010226;4.08e-18;1!UBERON:0004140;5.72e-18;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.64e-33;2!DOID:178;1.12e-17;1!DOID:326;1.12e-17;1!DOID:3978;1.12e-17;1!DOID:3394;1.12e-17;1!DOID:5844;1.12e-17;1!DOID:1287;2.59e-17;4!DOID:4074;1.64e-09;2!DOID:4905;1.64e-09;2!DOID:3498;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.92e-34,2;DOID:178,1.03e-17,1;DOID:326,1.03e-17,1;DOID:3978,1.03e-17,1;DOID:3394,1.03e-17,1;DOID:5844,1.03e-17,1;DOID:1287,2.02e-17,4;DOID:4074,1.71e-09,2;DOID:4905,1.71e-09,2;DOID:3498,1.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0003103!1.14e-09!69;UBERON:0004151!2.85e-09!3;UBERON:0003978!4.47e-09!3;UBERON:0009751!4.47e-09!3;UBERON:0000946!4.47e-09!3;UBERON:0002523!4.47e-09!3;UBERON:0005983!4.47e-09!3;UBERON:0002165!4.47e-09!3;UBERON:0002062!4.47e-09!3;UBERON:0007280!4.47e-09!3;UBERON:0007100!9.20e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.27e-32;25!UBERON:0004151;1.98e-23;3!UBERON:0002079;2.66e-18;1!UBERON:0002084;4.08e-18;1!UBERON:0002082;4.08e-18;1!UBERON:0002146;5.72e-18;1!UBERON:0005623;5.72e-18;1!UBERON:0000948;1.63e-12;22!UBERON:0002081;7.98e-10;2!UBERON:0003103;7.10e-07;61!UBERON:0003978;7.49e-07;3!UBERON:0000946;7.49e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.25e-30,27;UBERON:0004151,1.88e-23,3;UBERON:0002079,2.66e-18,1;UBERON:0002084,3.75e-18,1;UBERON:0002082,3.75e-18,1;UBERON:0010226,3.75e-18,1;UBERON:0002146,6.23e-18,1;UBERON:0005623,6.23e-18,1;UBERON:0003103,1.26e-11,68;UBERON:0000948,1.67e-11,24;UBERON:0005498,1.67e-11,24;UBERON:0004140,1.67e-11,24;UBERON:0009881,1.67e-11,24;UBERON:0004141,1.67e-11,24;UBERON:0003084,1.67e-11,24;UBERON:0007005,1.67e-11,24;UBERON:0004139,1.67e-11,24;UBERON:0004291,1.67e-11,24;UBERON:0002081,7.98e-10,2;UBERON:0010227,7.98e-10,2;UBERON:0001009,7.04e-07,112;UBERON:0003978,7.70e-07,3;UBERON:0009751,7.70e-07,3;UBERON:0000946,7.70e-07,3;UBERON:0002523,7.70e-07,3;UBERON:0005983,7.70e-07,3;UBERON:0002165,7.70e-07,3;UBERON:0002062,7.70e-07,3;UBERON:0007280,7.70e-07,3 | |||
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| ||
|short_description=p@chr2:27938986..27938991,+ | |short_description=p@chr2:27938986..27938991,+ | ||
}} | }} |
Latest revision as of 09:16, 29 July 2015
Short description: | p@chr2:27938986..27938991, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:27938986..27938991, + |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.25e-30 | 27 |
cardiac chamber | 1.88e-23 | 3 |
left cardiac atrium | 2.66e-18 | 1 |
heart left ventricle | 3.75e-18 | 1 |
cardiac ventricle | 3.75e-18 | 1 |
future cardiac ventricle | 3.75e-18 | 1 |
pulmonary valve | 6.23e-18 | 1 |
semi-lunar valve | 6.23e-18 | 1 |
compound organ | 1.26e-11 | 68 |
heart | 1.67e-11 | 24 |
primitive heart tube | 1.67e-11 | 24 |
primary heart field | 1.67e-11 | 24 |
anterior lateral plate mesoderm | 1.67e-11 | 24 |
heart tube | 1.67e-11 | 24 |
heart primordium | 1.67e-11 | 24 |
cardiac mesoderm | 1.67e-11 | 24 |
cardiogenic plate | 1.67e-11 | 24 |
heart rudiment | 1.67e-11 | 24 |
cardiac atrium | 7.98e-10 | 2 |
future cardiac atrium | 7.98e-10 | 2 |
circulatory system | 7.04e-07 | 112 |
valve | 7.70e-07 | 3 |
cardiac mesenchyme | 7.70e-07 | 3 |
cardial valve | 7.70e-07 | 3 |
tunica intima | 7.70e-07 | 3 |
heart layer | 7.70e-07 | 3 |
endocardium | 7.70e-07 | 3 |
endocardial cushion | 7.70e-07 | 3 |
presumptive endocardium | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.92e-34 | 2 |
vascular disease | 1.03e-17 | 1 |
ischemia | 1.03e-17 | 1 |
extrinsic cardiomyopathy | 1.03e-17 | 1 |
myocardial ischemia | 1.03e-17 | 1 |
myocardial infarction | 1.03e-17 | 1 |
cardiovascular system disease | 2.02e-17 | 4 |
pancreas adenocarcinoma | 1.71e-09 | 2 |
pancreatic carcinoma | 1.71e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.71e-09 | 2 |