FFCP PHASE1:Hg19::chr14:60975871..60975880,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:60975871..60975880,+
|short_description=p4@SIX6
|description=CAGE_peak_4_at_SIX6_5end
|association_with_transcript=-57bp_to_NM_007374,uc001xfa.3_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4990 | |EntrezGene=4990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10892 | |HGNC=10892 | ||
|TSSclassifier=strong | |||
|UniProt=O95475,Q6P051 | |UniProt=O95475,Q6P051 | ||
|association_with_transcript=-57bp_to_NM_007374,uc001xfa.3_5end | |||
|cluster_id=chr14:60975871..60975880,+ | |||
|coexpression_cluster_id=C1726 | |||
|description=CAGE_peak_4_at_SIX6_5end | |||
|id=chr14:60975871..60975880,+ | |||
|ontology_enrichment_celltype=CL:0000064!1.05e-21!3;CL:0005012!1.05e-21!3;CL:0000067!1.05e-21!3;CL:0002304!1.05e-21!3;CL:0000306!2.73e-16!4;CL:0002222!2.73e-16!4;CL:0002224!2.73e-16!4;CL:0000075!3.05e-15!27;CL:0002322!1.78e-12!5;CL:0000133!2.24e-11!59;CL:0000221!3.47e-09!71;CL:0000710!1.93e-08!20;CL:0000342!4.71e-08!1;CL:0002565!4.71e-08!1;CL:0000325!1.09e-07!39;CL:0002077!6.28e-07!33;CL:0000333!8.57e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.65e-46;3!CL:0000067;1.65e-46;3!CL:0005012;1.65e-46;3!CL:0002304;1.65e-46;3!CL:0000306;6.73e-35;4!CL:0002222;6.73e-35;4!CL:0002224;6.73e-35;4!CL:0000075;3.10e-27;27!CL:0000333;5.27e-13;5!CL:0000710;1.49e-12;20!CL:0002321;1.20e-09;15!CL:0002077;1.80e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.21e-46,3;CL:0000067,1.21e-46,3;CL:0005012,1.21e-46,3;CL:0002304,1.21e-46,3;CL:0000306,6.73e-35,4;CL:0002222,6.73e-35,4;CL:0002224,6.73e-35,4;CL:0000075,3.10e-27,27;CL:0000710,1.49e-12,20;CL:0000133,9.50e-09,59;CL:0002077,1.71e-07,34;CL:0000221,3.68e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;5.36e-11;6!DOID:171;5.94e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.36e-11,6;DOID:171,5.94e-07,10 | |||
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|short_description=p4@SIX6 | |||
}} | }} |
Latest revision as of 20:47, 24 September 2015
Short description: | p4@SIX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SIX6_5end |
Coexpression cluster: | C1726_acute_Lens_pituitary_Ciliary_eye_H9_retina |
Association with transcript: | -57bp_to_NM_007374, uc001xfa.3_5end |
EntrezGene: | SIX6 |
HGNC: | 10892 |
UniProt: | O95475Q6P051 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.21e-46 | 3 |
ciliated epithelial cell | 1.21e-46 | 3 |
multi-ciliated epithelial cell | 1.21e-46 | 3 |
non-pigmented ciliary epithelial cell | 1.21e-46 | 3 |
crystallin accumulating cell | 6.73e-35 | 4 |
vertebrate lens cell | 6.73e-35 | 4 |
lens epithelial cell | 6.73e-35 | 4 |
columnar/cuboidal epithelial cell | 3.10e-27 | 27 |
neurecto-epithelial cell | 1.49e-12 | 20 |
neurectodermal cell | 9.50e-09 | 59 |
ecto-epithelial cell | 1.71e-07 | 34 |
ectodermal cell | 3.68e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.36e-11 | 6 |
neuroectodermal tumor | 5.94e-07 | 10 |