FFCP PHASE1:Hg19::chr2:44554050..44554063,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:44554050..44554063,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr2:44554050..44554063,- | |description=CAGE_peak_at_chr2:44554050..44554063,- | ||
|id=chr2:44554050..44554063,- | |id=chr2:44554050..44554063,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000313;9.98e-30;1!CL:0000159;1.33e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,9.99e-30,1;CL:0000159,1.33e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.90e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;9.98e-30;1!DOID:4468;2.05e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.99e-30,1;DOID:4468,2.05e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.50e-24!57;UBERON:0005068!5.50e-24!57;UBERON:0006241!5.50e-24!57;UBERON:0007135!5.50e-24!57;UBERON:0007023!3.75e-21!115;UBERON:0002616!1.53e-19!59;UBERON:0001017!9.94e-19!82;UBERON:0000073!1.64e-18!94;UBERON:0001016!1.64e-18!94;UBERON:0005743!2.63e-18!86;UBERON:0002020!5.84e-18!34;UBERON:0003528!5.84e-18!34;UBERON:0000955!1.73e-17!69;UBERON:0006238!1.73e-17!69;UBERON:0001893!2.05e-17!34;UBERON:0001869!3.20e-17!32;UBERON:0002780!1.27e-16!41;UBERON:0001890!1.27e-16!41;UBERON:0006240!1.27e-16!41;UBERON:0002791!1.66e-16!33;UBERON:0003080!4.68e-16!42;UBERON:0000956!1.47e-15!25;UBERON:0000203!1.47e-15!25;UBERON:0003075!2.50e-15!86;UBERON:0007284!2.50e-15!86;UBERON:0002346!3.60e-15!90;UBERON:0002619!1.59e-14!22;UBERON:0001950!4.09e-14!20;UBERON:0004111!3.13e-11!241;UBERON:0000025!5.35e-11!194;UBERON:0003056!8.92e-11!61;UBERON:0000033!3.43e-10!123;UBERON:0000200!5.80e-10!6;UBERON:0000153!6.51e-10!129;UBERON:0007811!6.51e-10!129;UBERON:0000477!1.46e-09!286;UBERON:0003076!2.45e-09!15;UBERON:0003057!2.45e-09!15;UBERON:0004733!1.12e-07!12;UBERON:0002028!1.12e-07!12;UBERON:0007277!1.12e-07!12;UBERON:0000924!1.55e-07!173;UBERON:0006601!1.55e-07!173;UBERON:0001871!1.61e-07!7;UBERON:0004121!1.91e-07!169;UBERON:0004732!5.93e-07!13 | |ontology_enrichment_uberon=UBERON:0001049!5.50e-24!57;UBERON:0005068!5.50e-24!57;UBERON:0006241!5.50e-24!57;UBERON:0007135!5.50e-24!57;UBERON:0007023!3.75e-21!115;UBERON:0002616!1.53e-19!59;UBERON:0001017!9.94e-19!82;UBERON:0000073!1.64e-18!94;UBERON:0001016!1.64e-18!94;UBERON:0005743!2.63e-18!86;UBERON:0002020!5.84e-18!34;UBERON:0003528!5.84e-18!34;UBERON:0000955!1.73e-17!69;UBERON:0006238!1.73e-17!69;UBERON:0001893!2.05e-17!34;UBERON:0001869!3.20e-17!32;UBERON:0002780!1.27e-16!41;UBERON:0001890!1.27e-16!41;UBERON:0006240!1.27e-16!41;UBERON:0002791!1.66e-16!33;UBERON:0003080!4.68e-16!42;UBERON:0000956!1.47e-15!25;UBERON:0000203!1.47e-15!25;UBERON:0003075!2.50e-15!86;UBERON:0007284!2.50e-15!86;UBERON:0002346!3.60e-15!90;UBERON:0002619!1.59e-14!22;UBERON:0001950!4.09e-14!20;UBERON:0004111!3.13e-11!241;UBERON:0000025!5.35e-11!194;UBERON:0003056!8.92e-11!61;UBERON:0000033!3.43e-10!123;UBERON:0000200!5.80e-10!6;UBERON:0000153!6.51e-10!129;UBERON:0007811!6.51e-10!129;UBERON:0000477!1.46e-09!286;UBERON:0003076!2.45e-09!15;UBERON:0003057!2.45e-09!15;UBERON:0004733!1.12e-07!12;UBERON:0002028!1.12e-07!12;UBERON:0007277!1.12e-07!12;UBERON:0000924!1.55e-07!173;UBERON:0006601!1.55e-07!173;UBERON:0001871!1.61e-07!7;UBERON:0004121!1.91e-07!169;UBERON:0004732!5.93e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0002702;8.46e-57;2!UBERON:0000200;6.48e-43;6!UBERON:0001870;2.64e-38;3!UBERON:0004911;9.98e-30;1!UBERON:0002771;1.15e-15;2!UBERON:0004909;1.33e-15;2!UBERON:0001950;7.13e-13;20!UBERON:0002619;8.10e-12;22!UBERON:0000956;1.55e-10;25!UBERON:0000203;1.55e-10;25!UBERON:0002791;2.56e-08;32!UBERON:0001869;2.56e-08;32!UBERON:0001893;7.17e-08;34!UBERON:0003528;2.04e-07;34!UBERON:0002020;2.04e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,8.47e-57,2;UBERON:0000200,6.48e-43,6;UBERON:0001870,2.64e-38,3;UBERON:0004911,9.99e-30,1;UBERON:0002771,1.15e-15,2;UBERON:0004909,1.33e-15,2;UBERON:0001950,7.13e-13,20;UBERON:0002619,8.10e-12,22;UBERON:0000956,1.55e-10,25;UBERON:0000203,1.55e-10,25;UBERON:0000073,6.83e-09,53;UBERON:0002616,6.83e-09,53;UBERON:0001049,1.90e-08,56;UBERON:0005068,1.90e-08,56;UBERON:0006241,1.90e-08,56;UBERON:0007135,1.90e-08,56;UBERON:0002791,1.91e-08,32;UBERON:0001869,1.91e-08,32;UBERON:0003528,5.33e-08,34;UBERON:0002020,5.33e-08,34;UBERON:0001893,5.33e-08,34;UBERON:0000955,5.93e-07,68;UBERON:0006238,5.93e-07,68;UBERON:0002780,9.05e-07,41;UBERON:0001890,9.05e-07,41;UBERON:0003080,9.05e-07,41;UBERON:0006240,9.05e-07,41 | |||
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|short_description=p@chr2:44554050..44554063,- | |short_description=p@chr2:44554050..44554063,- | ||
}} | }} |
Latest revision as of 10:20, 29 July 2015
Short description: | p@chr2:44554050..44554063, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:44554050..44554063, - |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 9.99e-30 | 1 |
seromucus secreting cell | 1.33e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 8.47e-57 | 2 |
gyrus | 6.48e-43 | 6 |
frontal cortex | 2.64e-38 | 3 |
epithelium of female gonad | 9.99e-30 | 1 |
middle temporal gyrus | 1.15e-15 | 2 |
epithelium of gonad | 1.33e-15 | 2 |
neocortex | 7.13e-13 | 20 |
regional part of cerebral cortex | 8.10e-12 | 22 |
cerebral cortex | 1.55e-10 | 25 |
pallium | 1.55e-10 | 25 |
regional part of nervous system | 6.83e-09 | 53 |
regional part of brain | 6.83e-09 | 53 |
neural tube | 1.90e-08 | 56 |
neural rod | 1.90e-08 | 56 |
future spinal cord | 1.90e-08 | 56 |
neural keel | 1.90e-08 | 56 |
regional part of telencephalon | 1.91e-08 | 32 |
cerebral hemisphere | 1.91e-08 | 32 |
brain grey matter | 5.33e-08 | 34 |
gray matter | 5.33e-08 | 34 |
telencephalon | 5.33e-08 | 34 |
brain | 5.93e-07 | 68 |
future brain | 5.93e-07 | 68 |
regional part of forebrain | 9.05e-07 | 41 |
forebrain | 9.05e-07 | 41 |
anterior neural tube | 9.05e-07 | 41 |
future forebrain | 9.05e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.99e-30 | 1 |
clear cell adenocarcinoma | 2.05e-15 | 2 |